RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 NBPF15Q8N660 670 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 SCLT1Q96NL6 688 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 PLIN2Q99541 437 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 TAB2Q9NYJ8 693 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 HDAC9Q9UKV0 1011 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 STK24Q9Y6E0 443 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 EPB41P11171 864 aaKnown RBP9.35□□□□□ -0.91
VPS36-201ENST00000378060 ZAP70P43403 619 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 MAP3K9P80192 1104 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 PDIA6Q15084 440 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 LINC00116Q8NCU8 138 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 IFT74Q96LB3 600 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 SLF1Q9BQI6 1058 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 HAUS4Q9H6D7 363 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 PPP2R2CQ9Y2T4 447 aa9.35□□□□□ -0.91
VPS36-201ENST00000378060 TAF5LO75529 589 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 HSPD1P10809 573 aaKnown RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 ZBTB16Q05516 673 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 NONOQ15233 471 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS36-201ENST00000378060 ZSCAN26Q16670 478 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 SEL1L2Q5TEA6 688 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 UBLCP1Q8WVY7 318 aaPredicted RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 TSC1Q92574 1164 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 ZNF594Q96JF6 807 aaPredicted RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 SERTAD1Q9UHV2 236 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 MROH5Q6ZUA9 1318 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 TNS1Q9HBL0 1735 aaKnown RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 ALDH3A1P30838 453 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 HAUS3Q68CZ6 603 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 NELFBQ8WX92 580 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 RABGGTAQ92696 567 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 PAIP2Q9BPZ3 127 aaKnown RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 RCOR1Q9UKL0 485 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 PYCARDQ9ULZ3 195 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 ZBTB1Q9Y2K1 713 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 LAMB4A4D0S4 1761 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 IKBKBO14920 756 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 EN1Q05925 392 aaPredicted RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 PNOCQ13519 176 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 ILDR2Q71H61 639 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 PROM2Q8N271 834 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 GPR108Q9NPR9 543 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 NKIRAS1Q9NYS0 192 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 MAPK8IP1Q9UQF2 711 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 ZNF532Q9HCE3 1301 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 A0A1B0GUA9 196 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 DNM2P50570 870 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 LACTBP83111 547 aaPredicted RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 UTP14CQ5TAP6 766 aaKnown RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 CCDC50Q8IVM0 306 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 TRIM58Q8NG06 486 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 EDC3Q96F86 508 aaKnown RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 RSRC1Q96IZ7 334 aaKnown RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 TSNARE1Q96NA8 513 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 SMC6Q96SB8 1091 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 CSRNP2Q9H175 543 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 MED4Q9NPJ6 270 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 CCNL1Q9UK58 526 aaPredicted RBP9.34□□□□□ -0.91
VPS36-201ENST00000378060 FRMD4BQ9Y2L6 1034 aa9.34□□□□□ -0.91
VPS36-201ENST00000378060 H7C1D1 291 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 MTMR3Q13615 1198 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 PPP1R7Q15435 360 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 GSTA5Q7RTV2 222 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 TMEM87AQ8NBN3 555 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 ZC3H12CQ9C0D7 883 aaKnown RBP9.33□□□□□ -0.92
VPS36-201ENST00000378060 LRWD1Q9UFC0 647 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 ZMYM6O95789 1325 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 ATP2A2P16615 1042 aaKnown RBP9.33□□□□□ -0.92
VPS36-201ENST00000378060 PDIA3P30101 505 aaKnown RBP9.33□□□□□ -0.92
VPS36-201ENST00000378060 ADKP55263 362 aaKnown RBP9.33□□□□□ -0.92
VPS36-201ENST00000378060 ASIC2Q16515 512 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 SPATA1Q5VX52 437 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 TRMT44Q8IYL2 757 aaKnown RBP9.33□□□□□ -0.92
VPS36-201ENST00000378060 KCNJ14Q9UNX9 436 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 UTP11Q9Y3A2 253 aaKnown RBP9.33□□□□□ -0.92
VPS36-201ENST00000378060 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS36-201ENST00000378060 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS36-201ENST00000378060 ADCY9O60503 1353 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 TNFAIP3P21580 790 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 HIBADHP31937 336 aaKnown RBP9.33□□□□□ -0.92
VPS36-201ENST00000378060 PLCB3Q01970 1234 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 SLC39A14Q15043 492 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 SND1Q7KZF4 910 aaKnown RBP eCLIP9.33□□□□□ -0.92
VPS36-201ENST00000378060 TRMT1LQ7Z2T5 733 aaKnown RBP9.33□□□□□ -0.92
VPS36-201ENST00000378060 SIRT2Q8IXJ6 389 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 ZNF654Q8IZM8 581 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 SPATA5Q8NB90 893 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 SYNCQ9H7C4 482 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 POLR3EQ9NVU0 708 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 NDUFB9Q9Y6M9 179 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 LY75O60449 1722 aa9.33□□□□□ -0.92
VPS36-201ENST00000378060 FLOT1O75955 427 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 CYP19A1P11511 503 aaPredicted RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 ERCC5P28715 1186 aaPredicted RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 TCIRG1Q13488 830 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 ADCK5Q3MIX3 580 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 DCAF17Q5H9S7 520 aaPredicted RBP9.32□□□□□ -0.92
VPS36-201ENST00000378060 CLEC17AQ6ZS10 378 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 MYL10Q9BUA6 226 aa9.32□□□□□ -0.92
VPS36-201ENST00000378060 FANCLQ9NW38 375 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms