RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 MON2Q7Z3U7 1717 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 KRT86O43790 486 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ATP2C2O75185 946 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 RPN1P04843 607 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ARID4AP29374 1257 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CYLC1P35663 651 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 TMTC1Q8IUR5 882 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 NLRP3Q96P20 1036 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 ADAM21Q9UKJ8 722 aa16.15■□□□□ 0.18
TNFRSF1B-201ENST00000376259 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 LRP10Q7Z4F1 713 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 C2CD5Q86YS7 1000 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 RIN2Q8WYP3 895 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 RABGGTAQ92696 567 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 FAM217BQ9NTX9 383 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CCDC87Q9NVE4 849 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 RMND1Q9NWS8 449 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 BIN2Q9UBW5 565 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 MYO6Q9UM54 1294 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SCG2P13521 617 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 KCTD19Q17RG1 926 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 MAP3K14Q99558 947 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 INTS13Q9NVM9 706 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 TTF2Q9UNY4 1162 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SPATA31A3Q5VYP0 1347 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 BUB1O43683 1085 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 USO1O60763 962 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 ABL1P00519 1130 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 VEGFAP15692 232 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 RBM5P52756 815 aaKnown RBP eCLIP16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CERS3Q8IU89 383 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 NELFCDQ8IXH7 590 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 BPIFA3Q9BQP9 254 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 KANSL2Q9H9L4 492 aa16.14■□□□□ 0.17
TNFRSF1B-201ENST00000376259 HIBADHP31937 336 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 LRRC41Q15345 812 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 NTRK3Q16288 839 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 ODF2Q5BJF6 829 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 TRIM65Q6PJ69 517 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 PNMA1Q8ND90 353 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 OR8K1Q8NGG5 319 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CALML4Q96GE6 196 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CARD10Q9BWT7 1032 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 TMCO5BA8MYB1 307 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 MFAP3LO75121 409 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 PAFAH1B1P43034 410 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 ERFEQ4G0M1 354 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SND1Q7KZF4 910 aaKnown RBP eCLIP16.13■□□□□ 0.178e-7■■□□□ 14.1
TNFRSF1B-201ENST00000376259 FERMT2Q96AC1 680 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 NRXN3Q9Y4C0 1643 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 PARP1P09874 1014 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SLC7A5Q01650 507 aa16.13■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CPDO75976 1380 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 BMP15O95972 392 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SMCR8Q8TEV9 937 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SETDB2Q96T68 719 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 L2HGDHQ9H9P8 463 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 A0A087X0B3 334 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 TRIM66O15016 1216 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SASH3O75995 380 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 PRCPP42785 496 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 NOA1Q8NC60 698 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 RNF26Q9BY78 433 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 VSNL1P62760 191 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 PRPF4BQ13523 1007 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 MAP9Q49MG5 647 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 KRT26Q7Z3Y9 468 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 ADGRA1Q86SQ6 560 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 BLIDQ8IZY5 108 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 HPSEQ9Y251 543 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 MRFAP1Q9Y605 127 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SAR1BQ9Y6B6 198 aa16.12■□□□□ 0.17
TNFRSF1B-201ENST00000376259 WNT7AO00755 349 aa16.11■□□□□ 0.17
TNFRSF1B-201ENST00000376259 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
TNFRSF1B-201ENST00000376259 RRAGAQ7L523 313 aa16.11■□□□□ 0.17
TNFRSF1B-201ENST00000376259 SGMS1Q86VZ5 419 aa16.11■□□□□ 0.17
TNFRSF1B-201ENST00000376259 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1B-201ENST00000376259 ERCC5P28715 1186 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1B-201ENST00000376259 STAG2Q8N3U4 1231 aa16.11■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
TNFRSF1B-201ENST00000376259 PIK3C2AO00443 1686 aa16.11■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CYP19A1P11511 503 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 H2AFXP16104 143 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 KCTD16Q68DU8 428 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 MAATS1Q7Z4T9 603 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 MICALL1Q8N3F8 863 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 GSDMAQ96QA5 445 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 FAM204AQ9H8W3 233 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 TTC26A0AVF1 554 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 POTEB2H3BUK9 544 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CSF1RP07333 972 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CALM1P0DP23 149 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CALM2P0DP24 149 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CALM3P0DP25 149 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 CALML3P27482 149 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 C2orf54Q08AI8 447 aa16.1■□□□□ 0.17
TNFRSF1B-201ENST00000376259 C1orf167Q5SNV9 1468 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms