RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 FBXO28Q9NVF7 368 aa24.4■■□□□ 1.5
CHPF-202ENST00000373891 PGK2P07205 417 aa24.39■■□□□ 1.49
CHPF-202ENST00000373891 FCER1AP12319 257 aa24.39■■□□□ 1.49
CHPF-202ENST00000373891 ADD2P35612 726 aa24.39■■□□□ 1.49
CHPF-202ENST00000373891 CDK8P49336 464 aa24.39■■□□□ 1.49
CHPF-202ENST00000373891 SH2D4AQ9H788 454 aa24.39■■□□□ 1.49
CHPF-202ENST00000373891 USP17L12C9JPN9 530 aa24.38■■□□□ 1.49
CHPF-202ENST00000373891 USP17L21D6R901 530 aa24.38■■□□□ 1.49
CHPF-202ENST00000373891 WDR46O15213 610 aaKnown RBP24.38■■□□□ 1.49
CHPF-202ENST00000373891 FAM109BQ6ICB4 259 aaPredicted RBP24.38■■□□□ 1.49
CHPF-202ENST00000373891 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.38■■□□□ 1.49
CHPF-202ENST00000373891 SIRT2Q8IXJ6 389 aa24.38■■□□□ 1.49
CHPF-202ENST00000373891 MMP19Q99542 508 aa24.38■■□□□ 1.49
CHPF-202ENST00000373891 PDLIM7Q9NR12 457 aa24.38■■□□□ 1.49
CHPF-202ENST00000373891 EEF2P13639 858 aaKnown RBP24.37■■□□□ 1.49
CHPF-202ENST00000373891 C12orf60Q5U649 245 aa24.37■■□□□ 1.49
CHPF-202ENST00000373891 ABRAQ8N0Z2 381 aa24.37■■□□□ 1.49
CHPF-202ENST00000373891 COL25A1Q9BXS0 654 aaPredicted RBP24.37■■□□□ 1.49
CHPF-202ENST00000373891 ATP8A2Q9NTI2 1148 aa24.37■■□□□ 1.49
CHPF-202ENST00000373891 COG6Q9Y2V7 657 aa24.37■■□□□ 1.49
CHPF-202ENST00000373891 TRIM43BA6NCK2 446 aa24.36■■□□□ 1.49
CHPF-202ENST00000373891 TRIM43Q96BQ3 446 aaPredicted RBP24.36■■□□□ 1.49
CHPF-202ENST00000373891 LENG1Q96BZ8 264 aaPredicted RBP24.36■■□□□ 1.49
CHPF-202ENST00000373891 XPNPEP3Q9NQH7 507 aa24.36■■□□□ 1.49
CHPF-202ENST00000373891 EYSQ5T1H1 3165 aa24.36■■□□□ 1.49
CHPF-202ENST00000373891 MCM3APO60318 1980 aa24.36■■□□□ 1.49
CHPF-202ENST00000373891 MYH4Q9Y623 1939 aa24.35■■□□□ 1.49
CHPF-202ENST00000373891 HMMRO75330 724 aa24.35■■□□□ 1.49
CHPF-202ENST00000373891 PGK1P00558 417 aa24.35■■□□□ 1.49
CHPF-202ENST00000373891 TAL1P17542 331 aaPredicted RBP24.35■■□□□ 1.49
CHPF-202ENST00000373891 SNX17Q15036 470 aa24.35■■□□□ 1.49
CHPF-202ENST00000373891 AMOTL1Q8IY63 956 aa24.35■■□□□ 1.49
CHPF-202ENST00000373891 STK11IPQ8N1F8 1099 aa24.35■■□□□ 1.49
CHPF-202ENST00000373891 CCDC17Q96LX7 622 aa24.35■■□□□ 1.49
CHPF-202ENST00000373891 SLC4A4Q9Y6R1 1079 aa24.35■■□□□ 1.49
CHPF-202ENST00000373891 SLC25A27O95847 323 aa24.34■■□□□ 1.49
CHPF-202ENST00000373891 TLE2Q04725 743 aa24.34■■□□□ 1.49
CHPF-202ENST00000373891 FAM83BQ5T0W9 1011 aa24.34■■□□□ 1.49
CHPF-202ENST00000373891 C16orf86Q6ZW13 317 aa24.34■■□□□ 1.49
CHPF-202ENST00000373891 RPAP2Q8IXW5 612 aaPredicted RBP24.34■■□□□ 1.49
CHPF-202ENST00000373891 MIER1Q8N108 512 aa24.34■■□□□ 1.49
CHPF-202ENST00000373891 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.34■■□□□ 1.49
CHPF-202ENST00000373891 GREB1LQ9C091 1923 aaPredicted RBP24.33■■□□□ 1.49
CHPF-202ENST00000373891 RARBP10826 455 aa24.33■■□□□ 1.49
CHPF-202ENST00000373891 KCTD2Q14681 263 aa24.33■■□□□ 1.49
CHPF-202ENST00000373891 DDRGK1Q96HY6 314 aa24.33■■□□□ 1.49
CHPF-202ENST00000373891 CDX2Q99626 313 aaPredicted RBP24.33■■□□□ 1.49
CHPF-202ENST00000373891 ATP5JP18859 108 aa24.32■■□□□ 1.48
CHPF-202ENST00000373891 ITGB8P26012 769 aa24.32■■□□□ 1.48
CHPF-202ENST00000373891 STAT3P40763 770 aa24.32■■□□□ 1.48
CHPF-202ENST00000373891 CTR9Q6PD62 1173 aa24.32■■□□□ 1.48
CHPF-202ENST00000373891 RIOX2Q8IUF8 465 aa24.32■■□□□ 1.48
CHPF-202ENST00000373891 NUP88Q99567 741 aaPredicted RBP24.32■■□□□ 1.48
CHPF-202ENST00000373891 HAUS7Q99871 368 aa24.32■■□□□ 1.48
CHPF-202ENST00000373891 TINF2Q9BSI4 451 aa24.32■■□□□ 1.48
CHPF-202ENST00000373891 PPP1R9AQ9ULJ8 1098 aa24.32■■□□□ 1.48
CHPF-202ENST00000373891 ADAMTS5Q9UNA0 930 aa24.32■■□□□ 1.48
CHPF-202ENST00000373891 PHF24Q9UPV7 400 aa24.32■■□□□ 1.48
CHPF-202ENST00000373891 VWA5AO00534 786 aa24.31■■□□□ 1.48
CHPF-202ENST00000373891 RAB11FIP3O75154 756 aa24.31■■□□□ 1.48
CHPF-202ENST00000373891 PUS7LQ9H0K6 701 aaKnown RBP24.31■■□□□ 1.48
CHPF-202ENST00000373891 KANSL2Q9H9L4 492 aa24.31■■□□□ 1.48
CHPF-202ENST00000373891 GOPCQ9HD26 462 aa24.31■■□□□ 1.48
CHPF-202ENST00000373891 ZBTB40Q9NUA8 1239 aa24.31■■□□□ 1.48
CHPF-202ENST00000373891 PQBP1O60828 265 aaKnown RBP24.3■■□□□ 1.48
CHPF-202ENST00000373891 SLC4A3P48751 1232 aa24.3■■□□□ 1.48
CHPF-202ENST00000373891 ZNF792Q3KQV3 632 aa24.3■■□□□ 1.48
CHPF-202ENST00000373891 MYLIPQ8WY64 445 aa24.3■■□□□ 1.48
CHPF-202ENST00000373891 SEMA6BQ9H3T3 888 aa24.3■■□□□ 1.48
CHPF-202ENST00000373891 ZNF214Q9UL59 606 aaPredicted RBP24.3■■□□□ 1.48
CHPF-202ENST00000373891 DDX19BQ9UMR2 479 aa24.3■■□□□ 1.48
CHPF-202ENST00000373891 SMARCA5O60264 1052 aaPredicted RBP24.29■■□□□ 1.48
CHPF-202ENST00000373891 CLTBP09497 229 aa24.29■■□□□ 1.48
CHPF-202ENST00000373891 UBE3CQ15386 1083 aa24.29■■□□□ 1.48
CHPF-202ENST00000373891 RNF180Q86T96 592 aa24.29■■□□□ 1.48
CHPF-202ENST00000373891 REPS2Q8NFH8 660 aa24.29■■□□□ 1.48
CHPF-202ENST00000373891 TTYH1Q9H313 450 aaPredicted RBP24.29■■□□□ 1.48
CHPF-202ENST00000373891 PRUNE2Q8WUY3 3088 aa24.29■■□□□ 1.48
CHPF-202ENST00000373891 ZBED9Q6R2W3 1325 aa24.29■■□□□ 1.48
CHPF-202ENST00000373891 CDH23Q9H251 3354 aa24.28■■□□□ 1.48
CHPF-202ENST00000373891 A0A1W2PQ45 241 aaPredicted RBP24.28■■□□□ 1.48
CHPF-202ENST00000373891 A0A1W2PQY0 241 aa24.28■■□□□ 1.48
CHPF-202ENST00000373891 ZNF865P0CJ78 1059 aaPredicted RBP24.28■■□□□ 1.48
CHPF-202ENST00000373891 MS4A1P11836 297 aa24.28■■□□□ 1.48
CHPF-202ENST00000373891 EPHB4P54760 987 aa24.28■■□□□ 1.48
CHPF-202ENST00000373891 C1orf53Q5VUE5 145 aa24.28■■□□□ 1.48
CHPF-202ENST00000373891 MAFAQ8NHW3 353 aaPredicted RBP24.28■■□□□ 1.48
CHPF-202ENST00000373891 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.28■■□□□ 1.48
CHPF-202ENST00000373891 AKR1A1P14550 325 aa24.27■■□□□ 1.48
CHPF-202ENST00000373891 RNPC3Q96LT9 517 aaKnown RBP24.27■■□□□ 1.48
CHPF-202ENST00000373891 NRBP1Q9UHY1 535 aa24.27■■□□□ 1.48
CHPF-202ENST00000373891 CNPY2Q9Y2B0 182 aa24.27■■□□□ 1.48
CHPF-202ENST00000373891 TACC3Q9Y6A5 838 aa24.27■■□□□ 1.48
CHPF-202ENST00000373891 RAG1P15918 1043 aa24.26■■□□□ 1.47
CHPF-202ENST00000373891 SMAD3P84022 425 aaKnown RBP24.26■■□□□ 1.47
CHPF-202ENST00000373891 SNRNP48Q6IEG0 339 aaKnown RBP24.26■■□□□ 1.47
CHPF-202ENST00000373891 SLF1Q9BQI6 1058 aa24.26■■□□□ 1.47
CHPF-202ENST00000373891 DIS3Q9Y2L1 958 aaKnown RBP24.26■■□□□ 1.47
CHPF-202ENST00000373891 MYO9BQ13459 2157 aa24.26■■□□□ 1.47
CHPF-202ENST00000373891 MINDY4BA8MYZ0 360 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms