RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 MFSD6Q6ZSS7 791 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 AMIGO3Q86WK7 504 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 UTP14AQ9BVJ6 771 aaKnown RBP7.33□□□□□ -1.24
CHD6-202ENST00000373222 BIN2Q9UBW5 565 aaPredicted RBP7.33□□□□□ -1.24
CHD6-202ENST00000373222 COL14A1Q05707 1796 aaKnown RBP7.33□□□□□ -1.24
CHD6-202ENST00000373222 PLCH1Q4KWH8 1693 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 MROH5Q6ZUA9 1318 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 ERVV-1B6SEH8 477 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 LCE2BO14633 110 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 COBLO75128 1261 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 CYP7A1P22680 504 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 CDC25BP30305 580 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 DDB1Q16531 1140 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 ATL3Q6DD88 541 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 DIS3L2Q8IYB7 885 aaKnown RBP7.33□□□□□ -1.24
CHD6-202ENST00000373222 TRMT44Q8IYL2 757 aaKnown RBP7.33□□□□□ -1.24
CHD6-202ENST00000373222 PRKAG2Q9UGJ0 569 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 HPSEQ9Y251 543 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 BCL9LQ86UU0 1499 aa7.33□□□□□ -1.24
CHD6-202ENST00000373222 CREB3O43889 395 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 TPM3P06753 285 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 UQCRFS1P1P0C7P4 283 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 NLRP12P59046 1061 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 E4F1Q66K89 784 aaPredicted RBP7.32□□□□□ -1.24
CHD6-202ENST00000373222 SGMS1Q86VZ5 419 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 PRR7Q8TB68 274 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 CELF1Q92879 486 aaKnown RBP7.32□□□□□ -1.24
CHD6-202ENST00000373222 TINF2Q9BSI4 451 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 VPS54Q9P1Q0 977 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 PCDHA5Q9Y5H7 936 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 A0A087X0B3 334 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 FANCGO15287 622 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 CTIFO43310 598 aaKnown RBP7.32□□□□□ -1.24
CHD6-202ENST00000373222 PLEKHA8P1O95397 391 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 SSRP1Q08945 709 aaKnown RBP7.32□□□□□ -1.24
CHD6-202ENST00000373222 CHAF1AQ13111 956 aaPredicted RBP7.32□□□□□ -1.24
CHD6-202ENST00000373222 DSG2Q14126 1118 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 LDLRAD1Q5T700 205 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 RESP18Q5W5W9 173 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 CEP135Q66GS9 1140 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 THSD4Q6ZMP0 1018 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 NOSTRINQ8IVI9 506 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 TMEM87BQ96K49 555 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 MED15Q96RN5 788 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 INTS13Q9NVM9 706 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 FANCLQ9NW38 375 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 RAI14Q9P0K7 980 aa7.32□□□□□ -1.24
CHD6-202ENST00000373222 TIAM2Q8IVF5 1701 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 LAMB2P55268 1798 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 TNKSO95271 1327 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 WDR19Q8NEZ3 1342 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 FMNL1O95466 1100 aaPredicted RBP7.31□□□□□ -1.24
CHD6-202ENST00000373222 MMP1P03956 469 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 FANCCQ00597 558 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 FMR1Q06787 632 aaKnown RBP eCLIP7.31□□□□□ -1.24
CHD6-202ENST00000373222 PPARAQ07869 468 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 WTAPQ15007 396 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 ZRSR1Q15695 479 aaKnown RBP7.31□□□□□ -1.24
CHD6-202ENST00000373222 RTN1Q16799 776 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 NYAP1Q6ZVC0 841 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 TXNRD3Q86VQ6 643 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 ZNF654Q8IZM8 581 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 CCAR2Q8N163 923 aaKnown RBP7.31□□□□□ -1.24
CHD6-202ENST00000373222 LINC00116Q8NCU8 138 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 STAMQ92783 540 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 TMX1Q9H3N1 280 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 CABP5Q9NP86 173 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 TFCP2L1Q9NZI6 479 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 SRP68Q9UHB9 627 aaKnown RBP7.31□□□□□ -1.24
CHD6-202ENST00000373222 ZNF215Q9UL58 517 aaPredicted RBP7.31□□□□□ -1.24
CHD6-202ENST00000373222 KCNH3Q9ULD8 1083 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 MYH8P13535 1937 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 SPATA31A1Q5TZJ5 1347 aa7.31□□□□□ -1.24
CHD6-202ENST00000373222 POLR2DO15514 142 aaKnown RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 AP1G2O75843 785 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 CYP2D6P10635 497 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 IFNAR1P17181 557 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 IGHMBP2P38935 993 aaKnown RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 LIFRP42702 1097 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 RBM6P78332 1123 aaKnown RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 ALX1Q15699 326 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 CCDC152Q4G0S7 254 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 FAM47AQ5JRC9 791 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 CRACR2BQ8N4Y2 399 aaPredicted RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 ENAHQ8N8S7 591 aaPredicted RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 SPOCK3Q9BQ16 436 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 UBA5Q9GZZ9 404 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 SERTAD1Q9UHV2 236 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 CAVIN2O95810 425 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 ITGBL1O95965 494 aaPredicted RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 PAX3P23760 479 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 TRIM29Q14134 588 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 KRBA2Q6ZNG9 492 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 RASGRP2Q7LDG7 609 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 SMYD4Q8IYR2 804 aaPredicted RBP7.3□□□□□ -1.24
CHD6-202ENST00000373222 PDCL2Q8N4E4 241 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 FANCBQ8NB91 859 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 CNNM3Q8NE01 707 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 STAG1Q8WVM7 1258 aa7.3□□□□□ -1.24
CHD6-202ENST00000373222 ANKRD7Q92527 254 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms