RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 RAD21O60216 631 aa23.69■■□□□ 1.38
TMEM53-205ENST00000372244 XRCC5P13010 732 aaKnown RBP23.69■■□□□ 1.38
TMEM53-205ENST00000372244 CCAR1Q8IX12 1150 aaKnown RBP23.69■■□□□ 1.38
TMEM53-205ENST00000372244 NUP88Q99567 741 aaPredicted RBP23.69■■□□□ 1.38
TMEM53-205ENST00000372244 NUDT12Q9BQG2 462 aa23.69■■□□□ 1.38
TMEM53-205ENST00000372244 SPATC1LQ9H0A9 340 aa23.69■■□□□ 1.38
TMEM53-205ENST00000372244 CTNNA3Q9UI47 895 aa23.69■■□□□ 1.38
TMEM53-205ENST00000372244 PPP1R9AQ9ULJ8 1098 aa23.69■■□□□ 1.38
TMEM53-205ENST00000372244 ELNP15502 786 aa23.68■■□□□ 1.38
TMEM53-205ENST00000372244 MTFR1Q15390 333 aa23.68■■□□□ 1.38
TMEM53-205ENST00000372244 NKX2-3Q8TAU0 364 aa23.68■■□□□ 1.38
TMEM53-205ENST00000372244 TMEM106CQ9BVX2 250 aa23.68■■□□□ 1.38
TMEM53-205ENST00000372244 MOV10L1Q9BXT6 1211 aaKnown RBP23.68■■□□□ 1.38
TMEM53-205ENST00000372244 RNF41Q9H4P4 317 aaPredicted RBP23.68■■□□□ 1.38
TMEM53-205ENST00000372244 VWA5AO00534 786 aa23.68■■□□□ 1.38
TMEM53-205ENST00000372244 SKAP1Q86WV1 359 aa23.68■■□□□ 1.38
TMEM53-205ENST00000372244 LRRC47Q8N1G4 583 aaKnown RBP23.68■■□□□ 1.38
TMEM53-205ENST00000372244 SHCBP1Q8NEM2 672 aa23.68■■□□□ 1.38
TMEM53-205ENST00000372244 SOCS4Q8WXH5 440 aa23.68■■□□□ 1.38
TMEM53-205ENST00000372244 CCDC136Q96JN2 1154 aa23.68■■□□□ 1.38
TMEM53-205ENST00000372244 TOMM22Q9NS69 142 aa23.68■■□□□ 1.38
TMEM53-205ENST00000372244 SGSM2O43147 1006 aa23.67■■□□□ 1.38
TMEM53-205ENST00000372244 NT5C2P49902 561 aa23.67■■□□□ 1.38
TMEM53-205ENST00000372244 MLLT1Q03111 559 aaPredicted RBP23.67■■□□□ 1.38
TMEM53-205ENST00000372244 TMEM132BQ14DG7 1078 aa23.67■■□□□ 1.38
TMEM53-205ENST00000372244 RRP12Q5JTH9 1297 aaKnown RBP23.67■■□□□ 1.38
TMEM53-205ENST00000372244 SLFN13Q68D06 897 aa23.67■■□□□ 1.38
TMEM53-205ENST00000372244 PRPF38AQ8NAV1 312 aaKnown RBP23.67■■□□□ 1.38
TMEM53-205ENST00000372244 BIN2Q9UBW5 565 aaPredicted RBP23.67■■□□□ 1.38
TMEM53-205ENST00000372244 STX8Q9UNK0 236 aa23.67■■□□□ 1.38
TMEM53-205ENST00000372244 SLC15A5A6NIM6 579 aa23.66■■□□□ 1.38
TMEM53-205ENST00000372244 PTPREP23469 700 aa23.66■■□□□ 1.38
TMEM53-205ENST00000372244 UBXN2AP68543 259 aa23.66■■□□□ 1.38
TMEM53-205ENST00000372244 IMMTQ16891 758 aaKnown RBP23.66■■□□□ 1.38
TMEM53-205ENST00000372244 REPS2Q8NFH8 660 aa23.66■■□□□ 1.38
TMEM53-205ENST00000372244 GMCL1Q96IK5 515 aa23.66■■□□□ 1.38
TMEM53-205ENST00000372244 SLF1Q9BQI6 1058 aa23.66■■□□□ 1.38
TMEM53-205ENST00000372244 MYCP01106 439 aaPredicted RBP23.65■■□□□ 1.38
TMEM53-205ENST00000372244 FEM1BQ9UK73 627 aa23.65■■□□□ 1.38
TMEM53-205ENST00000372244 STRNO43815 780 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 INHAP05111 366 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 BMP3P12645 472 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 CCL5P13501 91 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 ERCC3P19447 782 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 EN2P19622 333 aaPredicted RBP23.64■■□□□ 1.38
TMEM53-205ENST00000372244 CYP2B6P20813 491 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 PTH1RQ03431 593 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 BMP2KLQ5H9B9 411 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 ESR2Q92731 530 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 TTC14Q96N46 770 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 MROH8Q9H579 483 aa23.64■■□□□ 1.38
TMEM53-205ENST00000372244 NEDD4P46934 1319 aa23.64■■□□□ 1.37
TMEM53-205ENST00000372244 NEFLP07196 543 aa23.63■■□□□ 1.37
TMEM53-205ENST00000372244 MCCP23508 829 aa23.63■■□□□ 1.37
TMEM53-205ENST00000372244 RGS2P41220 211 aa23.63■■□□□ 1.37
TMEM53-205ENST00000372244 MAP2K5Q13163 448 aa23.63■■□□□ 1.37
TMEM53-205ENST00000372244 GRB14Q14449 540 aa23.63■■□□□ 1.37
TMEM53-205ENST00000372244 RCSD1Q6JBY9 416 aa23.63■■□□□ 1.37
TMEM53-205ENST00000372244 SAMD1Q6SPF0 538 aaPredicted RBP23.63■■□□□ 1.37
TMEM53-205ENST00000372244 ZNF214Q9UL59 606 aaPredicted RBP23.63■■□□□ 1.37
TMEM53-205ENST00000372244 PLXNB2O15031 1838 aa23.63■■□□□ 1.37
TMEM53-205ENST00000372244 MYH4Q9Y623 1939 aa23.63■■□□□ 1.37
TMEM53-205ENST00000372244 SLC25A27O95847 323 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 HMGCRP04035 888 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 GJB1P08034 283 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 HOXC6P09630 235 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 TOP1P11387 765 aaKnown RBP23.62■■□□□ 1.37
TMEM53-205ENST00000372244 STAT3P40763 770 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 SLC1A4P43007 532 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 PLS1Q14651 629 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 RIOX2Q8IUF8 465 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 TRMT44Q8IYL2 757 aaKnown RBP23.62■■□□□ 1.37
TMEM53-205ENST00000372244 TRIB2Q92519 343 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 TMEM47Q9BQJ4 181 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 RNF208Q9H0X6 261 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 UNC93B1Q9H1C4 597 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 MKI67P46013 3256 aaKnown RBP23.62■■□□□ 1.37
TMEM53-205ENST00000372244 ATP2A1O14983 1001 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 PLA2G6O60733 806 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 WDR78Q5VTH9 848 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 ABRAQ8N0Z2 381 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 MAP4K1Q92918 833 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 CWC22Q9HCG8 908 aaKnown RBP23.62■■□□□ 1.37
TMEM53-205ENST00000372244 IVNS1ABPQ9Y6Y0 642 aa23.62■■□□□ 1.37
TMEM53-205ENST00000372244 A0A0G2JMZ2 1700 aa23.61■■□□□ 1.37
TMEM53-205ENST00000372244 PARP14Q460N5 1801 aa23.61■■□□□ 1.37
TMEM53-205ENST00000372244 TMEM232C9JQI7 657 aa23.61■■□□□ 1.37
TMEM53-205ENST00000372244 APBA2Q99767 749 aa23.61■■□□□ 1.37
TMEM53-205ENST00000372244 SLC38A10Q9HBR0 1119 aa23.61■■□□□ 1.37
TMEM53-205ENST00000372244 ZSWIM5Q9P217 1185 aa23.61■■□□□ 1.37
TMEM53-205ENST00000372244 KDM4AO75164 1064 aa23.6■■□□□ 1.37
TMEM53-205ENST00000372244 IGHA2P01877 340 aa23.6■■□□□ 1.37
TMEM53-205ENST00000372244 NCAPG2Q86XI2 1143 aa23.6■■□□□ 1.37
TMEM53-205ENST00000372244 DGKHQ86XP1 1220 aa23.6■■□□□ 1.37
TMEM53-205ENST00000372244 CHURC1Q8WUH1 139 aa23.6■■□□□ 1.37
TMEM53-205ENST00000372244 ANKS1AQ92625 1134 aa23.6■■□□□ 1.37
TMEM53-205ENST00000372244 KIFC2Q96AC6 838 aa23.6■■□□□ 1.37
TMEM53-205ENST00000372244 PAK6Q9NQU5 681 aaPredicted RBP23.6■■□□□ 1.37
TMEM53-205ENST00000372244 GJA8P48165 433 aa23.59■■□□□ 1.37
TMEM53-205ENST00000372244 TRIM32Q13049 653 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms