RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 FNDC3AQ9Y2H6 1198 aaKnown RBP10.87□□□□□ -0.67
COL4A6-202ENST00000372216 PRDM15P57071 1507 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-202ENST00000372216 PDE8BO95263 885 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 CNGA4Q8IV77 575 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 RDH13Q8NBN7 331 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 CHMP6Q96FZ7 201 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 ATP10DQ9P241 1426 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 PRR36Q9H6K5 1346 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 SLC4A1P02730 911 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 VWA3BQ502W6 1294 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 PRR16Q569H4 304 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 LIN9Q5TKA1 542 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 ANKRD35Q8N283 1001 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 TRIM7Q9C029 511 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 BLZF1Q9H2G9 400 aa10.87□□□□□ -0.67
COL4A6-202ENST00000372216 ABT1Q9ULW3 272 aaKnown RBP10.87□□□□□ -0.67
COL4A6-202ENST00000372216 MED23Q9ULK4 1368 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 ARPP19P56211 112 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 PTH1RQ03431 593 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 FAM173BQ6P4H8 233 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 FBXO11Q86XK2 927 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 MCF2L2Q86YR7 1114 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 TAB3Q8N5C8 712 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-202ENST00000372216 PARD3BQ8TEW8 1205 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 CCDC77Q9BR77 488 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 ERBB3P21860 1342 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 XRCC6P12956 609 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL4A6-202ENST00000372216 MCM6Q14566 821 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 LONRF3Q496Y0 759 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 RIOK1Q9BRS2 568 aaKnown RBP10.86□□□□□ -0.67
COL4A6-202ENST00000372216 MAGED2Q9UNF1 606 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-202ENST00000372216 TMEM232C9JQI7 657 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 OATP04181 439 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 HSPD1P10809 573 aaKnown RBP10.86□□□□□ -0.67
COL4A6-202ENST00000372216 DALRD3Q5D0E6 543 aaKnown RBP10.86□□□□□ -0.67
COL4A6-202ENST00000372216 TMC4Q7Z404 712 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 RSPH3Q86UC2 560 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 PNMA1Q8ND90 353 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 PIGBQ92521 554 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 EXOC3O60645 756 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 RHOXF2BP0C7M4 288 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 SLFN13Q68D06 897 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 TBC1D31Q96DN5 1066 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 RHOXF2Q9BQY4 288 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 ERCC6L2Q5T890 1561 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 TBC1D10BQ4KMP7 808 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-202ENST00000372216 DEPTORQ8TB45 409 aa10.86□□□□□ -0.67
COL4A6-202ENST00000372216 GPKOWQ92917 476 aaPredicted RBP eCLIP10.86□□□□□ -0.67
COL4A6-202ENST00000372216 TNKSO95271 1327 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 ZMYM6O95789 1325 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 PALLDQ8WX93 1383 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 BLIDQ8IZY5 108 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 CSRNP1Q96S65 589 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 CCPG1Q9ULG6 757 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 KDM3AQ9Y4C1 1321 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 TET3O43151 1660 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 NOLC1Q14978 699 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-202ENST00000372216 IGSF22Q8N9C0 903 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 MYO1AQ9UBC5 1043 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 PRKAG2Q9UGJ0 569 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-202ENST00000372216 SEMA3EO15041 775 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 NELFBQ8WX92 580 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 HEG1Q9ULI3 1381 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 SPOPO43791 374 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 BBOX1O75936 387 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 ZNF202O95125 648 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 OSBPP22059 807 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 POSTNQ15063 836 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 INF2Q27J81 1249 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 CCDC93Q567U6 631 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 VPS52Q8N1B4 723 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 MTUS1Q9ULD2 1270 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL4A6-202ENST00000372216 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 DDAH1O94760 285 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 HACE1Q8IYU2 909 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 BAG1Q99933 345 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-202ENST00000372216 TRIM31Q9BZY9 425 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 SUDS3Q9H7L9 328 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-202ENST00000372216 AFF2P51816 1311 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 KDM2BQ8NHM5 1336 aa10.85□□□□□ -0.67
COL4A6-202ENST00000372216 ADGRL3Q9HAR2 1447 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 ZEB2O60315 1214 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 CCDC122Q5T0U0 273 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 RYBPQ8N488 228 aaPredicted RBP10.84□□□□□ -0.67
COL4A6-202ENST00000372216 NSMCE1Q8WV22 266 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 NBPF3Q9H094 633 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 CACYBPQ9HB71 228 aaKnown RBP10.84□□□□□ -0.67
COL4A6-202ENST00000372216 SPATA31E1Q6ZUB1 1445 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 ADCY10Q96PN6 1610 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 M0R2C6 588 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 RAD17O75943 681 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 ATP2A2P16615 1042 aaKnown RBP10.84□□□□□ -0.67
COL4A6-202ENST00000372216 TECP42680 631 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 TRIM14Q14142 442 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 ME3Q16798 604 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 MMS19Q96T76 1030 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 NT5C3AQ9H0P0 336 aa10.84□□□□□ -0.67
COL4A6-202ENST00000372216 SWAP70Q9UH65 585 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms