RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 MTUS2Q5JR59 1369 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 PIK3R4Q99570 1358 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 FAM95CA0A1B0GW59 222 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 IGLV1-40P01703 118 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 TFE3P19532 575 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 RAB6AP20340 208 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 TNNI2P48788 182 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 ERVK-24P63145 666 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 RING1Q06587 406 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 NFIAQ12857 509 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 INPP5AQ14642 412 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 VPS72Q15906 364 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 SEZ6L2Q6UXD5 910 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 ERMP1Q7Z2K6 904 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 SLC51AQ86UW1 340 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 SHISA5Q8N114 240 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 ACSBG1Q96GR2 724 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 PDGFDQ9GZP0 370 aaPredicted RBP6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 ATXN3LQ9H3M9 355 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 GGT7Q9UJ14 662 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 TLR6Q9Y2C9 796 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 RIPOR2Q9Y4F9 1068 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 RIMS2Q9UQ26 1411 aa6.73□□□□□ -1.33
ECHDC1-204ENST00000368292 PARD3Q8TEW0 1356 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 THSD7AQ9UPZ6 1657 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 DYNC1LI2O43237 492 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 NEFMP07197 916 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 NTF4P34130 210 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 CDK8P49336 464 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 TTLL4Q14679 1199 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 NFKBIBQ15653 356 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 HS2ST1Q7LGA3 356 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 CNPY4Q8N129 248 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 DNAJC5GQ8N7S2 189 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 SLC43A3Q8NBI5 491 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 PHC3Q8NDX5 983 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 GATA6Q92908 595 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 ORAI2Q96SN7 254 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 SYT17Q9BSW7 474 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 CAPN10Q9HC96 672 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 COPRSQ9NQ92 184 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 PCDHA4Q9UN74 947 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 CSADQ9Y600 493 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 NRXN3Q9Y4C0 1643 aa6.72□□□□□ -1.33
ECHDC1-204ENST00000368292 DLC1Q96QB1 1528 aa6.71□□□□□ -1.33
ECHDC1-204ENST00000368292 GOLGB1Q14789 3259 aaKnown RBP6.71□□□□□ -1.33
ECHDC1-204ENST00000368292 ARHGEF5Q12774 1597 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 DCDC2CA8MYV0 355 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 F6X3S4 739 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 RLBP1P12271 317 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 MCCP23508 829 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 HNRNPUQ00839 825 aaKnown RBP eCLIP6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 SEPT6Q14141 434 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 USP48Q86UV5 1035 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 C12orf40Q86WS4 652 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 ZNF654Q8IZM8 581 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 GPATCH11Q8N954 259 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 RNF214Q8ND24 703 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 RSRP1Q9BUV0 290 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 C1GALT1Q9NS00 363 aa6.71□□□□□ -1.34
ECHDC1-204ENST00000368292 GSC2O15499 205 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 HCLS1P14317 486 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 ADMP35318 185 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 PPM1JQ5JR12 505 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 LRFN4Q6PJG9 635 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 PAOXQ6QHF9 649 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 CYFIP1Q7L576 1253 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 ZDHHC13Q8IUH4 622 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 MFSD14AQ96MC6 490 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 DNAJC2Q99543 621 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 DBNDD2Q9BQY9 259 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 YIPF2Q9BWQ6 316 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 PRKAG2Q9UGJ0 569 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 DAGLAQ9Y4D2 1042 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 CROCC2H7BZ55 1655 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 ABCA3Q99758 1704 aa6.7□□□□□ -1.34
ECHDC1-204ENST00000368292 GFRA2O00451 464 aa6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 F13BP05160 661 aa6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 MAP7Q14244 749 aa6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 SF3A1Q15459 793 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 SMYD4Q8IYR2 804 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 ISL2Q96A47 359 aa6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 PLPPR2Q96GM1 343 aa6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 RHOVQ96L33 236 aa6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 TMEM74Q96NL1 305 aa6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 MYH16Q9H6N6 1097 aa6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 LGR6Q9HBX8 967 aa6.69□□□□□ -1.34
ECHDC1-204ENST00000368292 ADGRL2O95490 1459 aa6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 RPRD2Q5VT52 1461 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 FYCO1Q9BQS8 1478 aa6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 PRR19A6NJB7 356 aa6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 PF4P02776 101 aa6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 CAMK2GQ13555 558 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 ZBTB37Q5TC79 503 aa6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 UBE3DQ7Z6J8 389 aa6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 ZAR1Q86SH2 424 aa6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 SHKBP1Q8TBC3 707 aa6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 MIR1-1HGQ9H1L0 117 aa6.68□□□□□ -1.34
ECHDC1-204ENST00000368292 PIDD1Q9HB75 910 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms