RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FKBP1AP62942 108 aaKnown RBP15.99■□□□□ 0.15
USF1-202ENST00000368020 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 LONRF3Q496Y0 759 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 MLKLQ8NB16 471 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 DBNDD1Q9H9R9 158 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 MYH8P13535 1937 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 GOLGB1Q14789 3259 aaKnown RBP15.99■□□□□ 0.15
USF1-202ENST00000368020 MDM2Q00987 491 aaPredicted RBP15.99■□□□□ 0.15
USF1-202ENST00000368020 PNOCQ13519 176 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 TTC38Q5R3I4 469 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 STRIP1Q5VSL9 837 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 ARL6IP4Q66PJ3 421 aaKnown RBP15.99■□□□□ 0.15
USF1-202ENST00000368020 CCDC150Q8NCX0 1101 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 CCDC12Q8WUD4 166 aaPredicted RBP15.99■□□□□ 0.15
USF1-202ENST00000368020 ERCC4Q92889 916 aaPredicted RBP15.99■□□□□ 0.15
USF1-202ENST00000368020 SMARCE1Q969G3 411 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 OSBPL5Q9H0X9 879 aaPredicted RBP15.99■□□□□ 0.15
USF1-202ENST00000368020 IL17RBQ9NRM6 502 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 SCN9AQ15858 1988 aa15.98■□□□□ 0.15
USF1-202ENST00000368020 BIN1O00499 593 aa15.98■□□□□ 0.15
USF1-202ENST00000368020 POLR2DO15514 142 aaKnown RBP15.98■□□□□ 0.15
USF1-202ENST00000368020 GTF2IP78347 998 aa15.98■□□□□ 0.15
USF1-202ENST00000368020 ATP2C1P98194 919 aaPredicted RBP15.98■□□□□ 0.15
USF1-202ENST00000368020 LRRC8AQ8IWT6 810 aa15.98■□□□□ 0.15
USF1-202ENST00000368020 DAGLBQ8NCG7 672 aa15.98■□□□□ 0.15
USF1-202ENST00000368020 ZNRF3Q9ULT6 936 aa15.98■□□□□ 0.15
USF1-202ENST00000368020 PCDHA5Q9Y5H7 936 aa15.98■□□□□ 0.15
USF1-202ENST00000368020 FLT1P17948 1338 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 RASA1P20936 1047 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 NPY5RQ15761 445 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 NIM1KQ8IY84 436 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 NEDD1Q8NHV4 660 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 SPZ1Q9BXG8 430 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 CSRNP2Q9H175 543 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 PCDHA4Q9UN74 947 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 PSME4Q14997 1843 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 PLIN4Q96Q06 1357 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 MYO3BQ8WXR4 1341 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.97■□□□□ 0.15
USF1-202ENST00000368020 USP17L3A6NCW0 530 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 USP17L4A6NCW7 530 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 NCAPHQ15003 741 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 PPP4R3BQ5MIZ7 849 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 USP17L1Q7RTZ2 530 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 MAPKAPK5Q8IW41 473 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 BLIDQ8IZY5 108 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 DYNLL2Q96FJ2 89 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 PYCARDQ9ULZ3 195 aa15.97■□□□□ 0.15
USF1-202ENST00000368020 hCG_1984214I3L0E3 225 aa15.96■□□□□ 0.15
USF1-202ENST00000368020 ACTN4O43707 911 aaKnown RBP15.96■□□□□ 0.15
USF1-202ENST00000368020 SLFN14P0C7P3 912 aa15.96■□□□□ 0.15
USF1-202ENST00000368020 PRKCSHP14314 528 aaPredicted RBP15.96■□□□□ 0.15
USF1-202ENST00000368020 ATP2B1P20020 1258 aa15.96■□□□□ 0.15
USF1-202ENST00000368020 CDK8P49336 464 aa15.96■□□□□ 0.15
USF1-202ENST00000368020 SARSP49591 514 aaKnown RBP15.96■□□□□ 0.15
USF1-202ENST00000368020 ARHGAP27Q6ZUM4 889 aa15.96■□□□□ 0.15
USF1-202ENST00000368020 ZNF713Q8N859 430 aaPredicted RBP15.96■□□□□ 0.15
USF1-202ENST00000368020 SPATA20Q8TB22 786 aa15.96■□□□□ 0.15
USF1-202ENST00000368020 FBXW7Q969H0 707 aa15.96■□□□□ 0.15
USF1-202ENST00000368020 SHISA4Q96DD7 197 aa15.96■□□□□ 0.15
USF1-202ENST00000368020 NRBP1Q9UHY1 535 aa15.96■□□□□ 0.15
USF1-202ENST00000368020 MAD2L2Q9UI95 211 aa15.96■□□□□ 0.15
USF1-202ENST00000368020 YDJCA8MPS7 323 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 LAD1O00515 517 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 DYNC1I1O14576 645 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 TOP1P11387 765 aaKnown RBP15.95■□□□□ 0.14
USF1-202ENST00000368020 YBX3P16989 372 aaKnown RBP eCLIP15.95■□□□□ 0.141e-6■□□□□ 8.7
USF1-202ENST00000368020 LMNB1P20700 586 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 TXLNAP40222 546 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 RHBDL3P58872 404 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 DACT2Q5SW24 774 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 KCND1Q9NSA2 647 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 SERTAD1Q9UHV2 236 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 STX8Q9UNK0 236 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 SBF1O95248 1867 aa15.95■□□□□ 0.14
USF1-202ENST00000368020 BAZ2BQ9UIF8 2168 aaKnown RBP15.94■□□□□ 0.14
USF1-202ENST00000368020 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
USF1-202ENST00000368020 COL4A5P29400 1685 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 PALM3A6NDB9 673 aaPredicted RBP15.94■□□□□ 0.14
USF1-202ENST00000368020 ERCC5P28715 1186 aaPredicted RBP15.94■□□□□ 0.14
USF1-202ENST00000368020 LONP1P36776 959 aaKnown RBP15.94■□□□□ 0.14
USF1-202ENST00000368020 KCNJ6P48051 423 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 PLCD1P51178 756 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 EVX2Q03828 476 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 MORC3Q14149 939 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 GRIK5Q16478 980 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 CACTINQ8WUQ7 758 aaKnown RBP15.94■□□□□ 0.14
USF1-202ENST00000368020 GSDMAQ96QA5 445 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 TMEM47Q9BQJ4 181 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 MRIQ9BWK5 157 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 BARHL2Q9NY43 387 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 IFNKQ9P0W0 207 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 A0A087WWV3 80 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 UQCRHLA0A096LP55 91 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 hCG_1642624A0A1W2PR95 340 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 GRIN3BO60391 1043 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 UQCRHP07919 91 aa15.94■□□□□ 0.14
USF1-202ENST00000368020 VIL1P09327 827 aaKnown RBP15.94■□□□□ 0.14
USF1-202ENST00000368020 PARP1P09874 1014 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms