RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 R3HDM1Q15032 1099 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 ZNF174Q15697 407 aa20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 NT5DC1Q5TFE4 455 aa20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 KIAA1524Q8TCG1 905 aa20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 CCDC12Q8WUD4 166 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 SPTLC3Q9NUV7 552 aa20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 STK32BQ9NY57 414 aa20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 DACH1Q9UI36 760 aa20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 ZNF646O15015 1829 aaPredicted RBP20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 F8W031 263 aaPredicted RBP20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 ACTN4O43707 911 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 GABPAQ06546 454 aa20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 PICALMQ13492 652 aa20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 MSL1Q68DK7 614 aa20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 SMARCE1Q969G3 411 aa20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 CEP95Q96GE4 821 aa20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 MRIQ9BWK5 157 aa20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 USP40Q9NVE5 1235 aa20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 BARHL2Q9NY43 387 aa20.87■□□□□ 0.93
PDLIM7-203ENST00000359895 PTGDRQ13258 359 aa20.86■□□□□ 0.93
PDLIM7-203ENST00000359895 NCAPHQ15003 741 aa20.86■□□□□ 0.93
PDLIM7-203ENST00000359895 SLC15A2Q16348 729 aa20.86■□□□□ 0.93
PDLIM7-203ENST00000359895 ARL6IP4Q66PJ3 421 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-203ENST00000359895 GPKOWQ92917 476 aaPredicted RBP eCLIP20.86■□□□□ 0.93
PDLIM7-203ENST00000359895 GREB1LQ9C091 1923 aaPredicted RBP20.86■□□□□ 0.93
PDLIM7-203ENST00000359895 STXBP3O00186 592 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 CYTH3O43739 400 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 SMC2O95347 1197 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 VEGFAP15692 232 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 SARSP49591 514 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 MYL5Q02045 173 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 DHX8Q14562 1220 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 NOM1Q5C9Z4 860 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 WWC2Q6AWC2 1192 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 FOXP4Q8IVH2 680 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 CNKSR1Q969H4 720 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 MYH4Q9Y623 1939 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 CCDC194A0A1B0GVG4 234 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 HLA-DOAP06340 250 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 HDLBPQ00341 1268 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 PPP4R3BQ5MIZ7 849 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 HEATR3Q7Z4Q2 680 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 MLKLQ8NB16 471 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 RRP36Q96EU6 259 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 OSBPL5Q9H0X9 879 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 IMPACTQ9P2X3 320 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 NRBP1Q9UHY1 535 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 SERPINB13Q9UIV8 391 aa20.85■□□□□ 0.93
PDLIM7-203ENST00000359895 hCG_1984214I3L0E3 225 aa20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 M0R2N6 131 aa20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 WNT7AO00755 349 aa20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 SLFN14P0C7P3 912 aa20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 SLC35G1Q2M3R5 365 aa20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 CT47A1Q5JQC4 288 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 STRIP1Q5VSL9 837 aa20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 ISM2Q6H9L7 571 aa20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 CDC42EP5Q6NZY7 148 aa20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 ZNF713Q8N859 430 aaPredicted RBP20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 SYMPKQ92797 1274 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 MTMR4Q9NYA4 1195 aa20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 MAN1B1Q9UKM7 699 aa20.84■□□□□ 0.93
PDLIM7-203ENST00000359895 IGKV6D-41A0A0C4DH26 115 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 FOXN1O15353 648 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 CRKP46108 304 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 SCNN1DP51172 638 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 GSDMDP57764 484 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 ASPRV1Q53RT3 343 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 USP49Q70CQ1 688 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 PDILTQ8N807 584 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 SPATA20Q8TB22 786 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 ZDHHC15Q96MV8 337 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 PDGFDQ9GZP0 370 aaPredicted RBP20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 DDX4Q9NQI0 724 aaKnown RBP20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 SEC63Q9UGP8 760 aaKnown RBP20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 PYCARDQ9ULZ3 195 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 MTMR7Q9Y216 660 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 SCN9AQ15858 1988 aa20.83■□□□□ 0.92
PDLIM7-203ENST00000359895 VWA3AA6NCI4 1184 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 CBFA2T2O43439 604 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 MCM7P33993 719 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 LONP1P36776 959 aaKnown RBP20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 MORC3Q14149 939 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 CC2D2BQ6DHV5 1058 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 DHX58Q96C10 678 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 EPSTI1Q96J88 318 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 ZMYND12Q9H0C1 365 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 EHD4Q9H223 541 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 PCDHA6Q9UN73 950 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 PCDHA8Q9Y5H6 950 aa20.82■□□□□ 0.92
PDLIM7-203ENST00000359895 TPM2P07951 284 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 PRR29P0C7W0 189 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 GOLGA8HP0CJ92 632 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 GNA11P29992 359 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 CCDC144BQ3MJ40 725 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 APOBEC3HQ6NTF7 200 aaKnown RBP20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 TYW1BQ6NUM6 668 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 KRT25Q7Z3Z0 450 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 SH3RF1Q7Z6J0 888 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 MXD3Q9BW11 206 aa20.81■□□□□ 0.92
PDLIM7-203ENST00000359895 DBNDD1Q9H9R9 158 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms