RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 NEXMIFQ5QGS0 1516 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 PAPPA2Q9BXP8 1791 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 MRE11P49959 708 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 POU5F1Q01860 360 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 SEMA5AQ13591 1074 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 HOMER1Q86YM7 354 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 CCNJLQ8IV13 435 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 COLEC11Q9BWP8 271 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 MRPL4Q9BYD3 311 aaKnown RBP2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 INPP5FQ9Y2H2 1132 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 THSD7AQ9UPZ6 1657 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 UBR2Q8IWV8 1755 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 RBAK-RBAKDNI3L0D1 243 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 ST18O60284 1047 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 CAND2O75155 1236 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 TUSC2O75896 110 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 NCAM1P13591 858 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 TXLNAP40222 546 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 LAMC2Q13753 1193 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 PCBP1Q15365 356 aaKnown RBP eCLIP2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 GRIK5Q16478 980 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 CSPP1Q1MSJ5 1256 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 C11orf91Q3C1V1 193 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 HSP90AB2PQ58FF8 381 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 TBC1D1Q86TI0 1168 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 GGA3Q9NZ52 723 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 GIMAP2Q9UG22 337 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 TMEM98Q9Y2Y6 226 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 SH3BP1Q9Y3L3 701 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 ROBO1Q9Y6N7 1651 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 CPS1P31327 1500 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 ERVK-7P63135 1459 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 CEP162Q5TB80 1403 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 A6NCN8 305 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 SOWAHBA6NEL2 793 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 hCG_1984214I3L0E3 225 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 PTPREP23469 700 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 WASP42768 502 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 SLC35F1Q5T1Q4 408 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 XRRA1Q6P2D8 792 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 LMBR1LQ6UX01 489 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 CYP26C1Q6V0L0 522 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 KREMEN2Q8NCW0 462 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 CHMP4CQ96CF2 233 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 INSRP06213 1382 aa2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 COL5A2P05997 1499 aaPredicted RBP2.5□□□□□ -2.01
SMARCAD1-202ENST00000359052 A0A1W2PP55 124 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 SOBPA7XYQ1 873 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 ALG1L2C9J202 215 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 RBP3P10745 1247 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 FGFR1P11362 822 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 CTSSP25774 331 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 NASPP49321 788 aaPredicted RBP2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 BPIFB3P59826 476 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.49□□□□□ -2.011e-10■■□□□ 13.9
SMARCAD1-202ENST00000359052 BCO2Q9BYV7 579 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 TWSG1Q9GZX9 223 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 IFT122Q9HBG6 1241 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 RGPD8O14715 1765 aaPredicted RBP2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 SPATA31E1Q6ZUB1 1445 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZBTB42B2RXF5 422 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 PRKD3O94806 890 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 BCRP11274 1271 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 GRIA2P42262 883 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 RTL10Q7L3V2 364 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 CHPFQ8IZ52 775 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 HOOK2Q96ED9 719 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 NEUROD6Q96NK8 337 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 CCSER2Q9H7U1 834 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 TMEM8AQ9HCN3 771 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 LRRC37A3O60309 1634 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 PTPRUQ92729 1446 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 FAM155BO75949 473 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 HOXB4P17483 251 aaPredicted RBP2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 LIG1P18858 919 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 MTNR1BP49286 362 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 HTRA3P83110 453 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZBED6P86452 979 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 GAS6Q14393 721 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 FSTL4Q6MZW2 842 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 RPUSD3Q6P087 351 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZMIZ2Q8NF64 920 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 L3MBTL2Q969R5 705 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 CEP89Q96ST8 783 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 ANP32EQ9BTT0 268 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 PHTF1Q9UMS5 762 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 PCDHB3Q9Y5E6 796 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 RTEL1-TNFRSF6BF6WH68 1400 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 MAP2P11137 1827 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 A0A087WZ62 844 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 IRS4O14654 1257 aaPredicted RBP2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 DDX58O95786 925 aaKnown RBP2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 MPP2Q14168 576 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 DBX2Q6ZNG2 339 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 CCDC129Q6ZRS4 1044 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 KIAA0825Q8IV33 1275 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 Q8NA96 180 aa2.49□□□□□ -2.01
SMARCAD1-202ENST00000359052 ZNF280CQ8ND82 737 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms