RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 XAGE2Q96GT9 111 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 PPP1R12CQ9BZL4 782 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 R3HCC1Q9Y3T6 440 aaKnown RBP4.45□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L5A8MUK1 530 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 GH2P01242 217 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 CASP7P55210 303 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 ZRSR1Q15695 479 aaKnown RBP4.45□□□□□ -1.7
SMC1B-201ENST00000357450 INTS3Q68E01 1043 aaKnown RBP4.45□□□□□ -1.7
SMC1B-201ENST00000357450 CRIPAKQ8N1N5 446 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 NOC3LQ8WTT2 800 aaKnown RBP4.45□□□□□ -1.7
SMC1B-201ENST00000357450 GAS2L1Q99501 681 aaPredicted RBP4.45□□□□□ -1.7
SMC1B-201ENST00000357450 MEIS3Q99687 375 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 USP26Q9BXU7 913 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 PKD2L1Q9P0L9 805 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 HPS5Q9UPZ3 1129 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 TACC3Q9Y6A5 838 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 WDR90Q96KV7 1748 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 DCDC2CA8MYV0 355 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 NOP56O00567 594 aaKnown RBP4.45□□□□□ -1.7
SMC1B-201ENST00000357450 PDE8BO95263 885 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 EGFRP00533 1210 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 SPRYD7Q5W111 196 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 CENPQQ7L2Z9 268 aaPredicted RBP4.45□□□□□ -1.7
SMC1B-201ENST00000357450 PPP1R9BQ96SB3 815 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 BDP1A6H8Y1 2624 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 USP17L10C9JJH3 530 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 FZD9O00144 591 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 IRF6O14896 467 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 MYCLP12524 364 aaPredicted RBP4.45□□□□□ -1.7
SMC1B-201ENST00000357450 EN2P19622 333 aaPredicted RBP4.45□□□□□ -1.7
SMC1B-201ENST00000357450 CALML3P27482 149 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 KCNJ6P48051 423 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 HAND2P61296 217 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 ICA1Q05084 483 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 MTMR2Q13614 643 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 SF3B3Q15393 1217 aaKnown RBP4.45□□□□□ -1.7
SMC1B-201ENST00000357450 SAMM50Q9Y512 469 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 PTCH2Q9Y6C5 1203 aa4.45□□□□□ -1.7
SMC1B-201ENST00000357450 ASXL3Q9C0F0 2248 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 ATP2B1P20020 1258 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 KLRK1P26718 216 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 SLC1A4P43007 532 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 TTF1Q15361 905 aaPredicted RBP4.44□□□□□ -1.7
SMC1B-201ENST00000357450 TXNRD3Q86VQ6 643 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 WNK4Q96J92 1243 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 GPCPD1Q9NPB8 672 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 DDX19BQ9UMR2 479 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 CPLX1O14810 134 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 IGSF3O75054 1194 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 UPP2O95045 317 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 LIG1P18858 919 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 KCNA3P22001 575 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 VGLL4Q14135 290 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 CCDC102BQ68D86 513 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 PLEKHM2Q8IWE5 1019 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 SPATA5Q8NB90 893 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 GPRC5AQ8NFJ5 357 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 CUL5Q93034 780 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 PAWRQ96IZ0 340 aaKnown RBP4.44□□□□□ -1.7
SMC1B-201ENST00000357450 GLT1D1Q96MS3 346 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 UPF2Q9HAU5 1272 aaKnown RBP4.44□□□□□ -1.7
SMC1B-201ENST00000357450 TMEM39AQ9NV64 488 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 BABAM1Q9NWV8 329 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 PLA2G2EQ9NZK7 142 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 CLIP2Q9UDT6 1046 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 ZDBF2Q9HCK1 2354 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 TLR3O15455 904 aaKnown RBP4.44□□□□□ -1.7
SMC1B-201ENST00000357450 RARBP10826 455 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 HOXA10P31260 410 aaPredicted RBP4.44□□□□□ -1.7
SMC1B-201ENST00000357450 USP14P54578 494 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 GNASQ5JWF2 1037 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 FCHSD1Q86WN1 690 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 ARRDC4Q8NCT1 418 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 PI4K2BQ8TCG2 481 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 KCNG4Q8TDN1 519 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 LNPKQ9C0E8 428 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 PI4KBQ9UBF8 816 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 RIPOR2Q9Y4F9 1068 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 CNTNAP1P78357 1384 aa4.44□□□□□ -1.7
SMC1B-201ENST00000357450 ANK1P16157 1881 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 PPFIA3O75145 1194 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 MBD4O95243 580 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 PRSS12P56730 875 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 PLA2G2CQ5R387 149 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 IQCA1Q86XH1 822 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 RWDD1Q9H446 243 aaPredicted RBP4.43□□□□□ -1.7
SMC1B-201ENST00000357450 TMEM265A0A087WTH1 108 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 ZEB2O60315 1214 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 MYL3P08590 195 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 ADD1P35611 737 aaKnown RBP4.43□□□□□ -1.7
SMC1B-201ENST00000357450 USH1GQ495M9 461 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 EDC3Q96F86 508 aaKnown RBP4.43□□□□□ -1.7
SMC1B-201ENST00000357450 DBNDD2Q9BQY9 259 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 LRRCC1Q9C099 1032 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 ARMT1Q9H993 441 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 SLC28A3Q9HAS3 691 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 GOPCQ9HD26 462 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 STAP2Q9UGK3 403 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 SNED1Q8TER0 1413 aa4.43□□□□□ -1.7
SMC1B-201ENST00000357450 YDJCA8MPS7 323 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms