RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 A0A1B0GUL6 1792 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 A0A0D9SFI3 127 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 RGS20O76081 388 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 CYBAP13498 195 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 MYOGP15173 224 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 CYP2C19P33261 490 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 FAAP100Q0VG06 881 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 IFIT5Q13325 482 aaKnown RBP9.74□□□□□ -0.85
CD44-205ENST00000352818 NECTIN1Q15223 517 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 LRRC24Q50LG9 513 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 IER5LQ5T953 404 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 CDC42EP5Q6NZY7 148 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 GJD3Q8N144 294 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 KBTBD3Q8NAB2 608 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 TNPO1Q92973 898 aaKnown RBP9.74□□□□□ -0.85
CD44-205ENST00000352818 TMX3Q96JJ7 454 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 TTC14Q96N46 770 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 HMG20BQ9P0W2 317 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 CEP126Q9P2H0 1117 aa9.74□□□□□ -0.85
CD44-205ENST00000352818 IQSEC3Q9UPP2 1182 aaPredicted RBP9.74□□□□□ -0.85
CD44-205ENST00000352818 A0A1B0GUL7 405 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 GFRA3O60609 400 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 MSCO60682 206 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 ACRP10323 421 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 CNGA1P29973 690 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 HIBADHP31937 336 aaKnown RBP9.73□□□□□ -0.85
CD44-205ENST00000352818 HMGCS2P54868 508 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 PTH1RQ03431 593 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 TCF15Q12870 199 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 TSGA10IPQ3SY00 556 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 ERMP1Q7Z2K6 904 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 FAM178BQ8IXR5 827 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 HLA-CQ95604 372 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 FAM227BQ96M60 508 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 RBM8AQ9Y5S9 174 aaKnown RBP9.73□□□□□ -0.85
CD44-205ENST00000352818 GVINP1Q7Z2Y8 2422 aa9.73□□□□□ -0.85
CD44-205ENST00000352818 ANKRD18BA2A2Z9 1011 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 PQBP1O60828 265 aaKnown RBP9.72□□□□□ -0.85
CD44-205ENST00000352818 MAPK4P31152 587 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 RABGGTBP53611 331 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 SPP2Q13103 211 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 CHAF1AQ13111 956 aaPredicted RBP9.72□□□□□ -0.85
CD44-205ENST00000352818 MAP2K5Q13163 448 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 GSE1Q14687 1217 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 LRRC41Q15345 812 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 RAB30Q15771 203 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 TAF7LQ5H9L4 462 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 VPS53Q5VIR6 699 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 RNF20Q5VTR2 975 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 MFSD14CQ5VZR4 134 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 HHIPL2Q6UWX4 724 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 ZNF365Q70YC5 407 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 FBXO33Q7Z6M2 555 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 RASEFQ8IZ41 740 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 VGLL2Q8N8G2 317 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 ARRDC4Q8NCT1 418 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 GPRC5AQ8NFJ5 357 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 NPLOC4Q8TAT6 608 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 ZNF594Q96JF6 807 aaPredicted RBP9.72□□□□□ -0.85
CD44-205ENST00000352818 ZNF512BQ96KM6 892 aaPredicted RBP9.72□□□□□ -0.85
CD44-205ENST00000352818 PUS3Q9BZE2 481 aaKnown RBP9.72□□□□□ -0.85
CD44-205ENST00000352818 ALDH8A1Q9H2A2 487 aaPredicted RBP9.72□□□□□ -0.85
CD44-205ENST00000352818 SLC28A3Q9HAS3 691 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 ZSWIM6Q9HCJ5 1215 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 HELLSQ9NRZ9 838 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 TMEM39AQ9NV64 488 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 PAG1Q9NWQ8 432 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 MSRAQ9UJ68 235 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 TBX21Q9UL17 535 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 VPS13AQ96RL7 3174 aa9.72□□□□□ -0.85
CD44-205ENST00000352818 LOC285556D6RIA3 1793 aa9.71□□□□□ -0.85
CD44-205ENST00000352818 DOCK2Q92608 1830 aa9.71□□□□□ -0.85
CD44-205ENST00000352818 KBTBD13C9JR72 458 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 SLC27A2O14975 620 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 CTNND1O60716 968 aaKnown RBP9.71□□□□□ -0.86
CD44-205ENST00000352818 TIMP1P01033 207 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 CSF2RAP15509 400 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 PSMA5P28066 241 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 RRP1BQ14684 758 aaKnown RBP9.71□□□□□ -0.86
CD44-205ENST00000352818 CSPP1Q1MSJ5 1256 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 LRRFIP1Q32MZ4 808 aaKnown RBP9.71□□□□□ -0.86
CD44-205ENST00000352818 MCMDC2Q4G0Z9 681 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 CREB3L3Q68CJ9 461 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 PLEKHH3Q7Z736 793 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 EDC3Q96F86 508 aaKnown RBP9.71□□□□□ -0.86
CD44-205ENST00000352818 ZSCAN31Q96LW9 406 aaPredicted RBP9.71□□□□□ -0.86
CD44-205ENST00000352818 DNAJC2Q99543 621 aaKnown RBP9.71□□□□□ -0.86
CD44-205ENST00000352818 UPF3BQ9BZI7 483 aaKnown RBP9.71□□□□□ -0.86
CD44-205ENST00000352818 PHF24Q9UPV7 400 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 NDUFB9Q9Y6M9 179 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 U3KPZ7 1027 aaPredicted RBP9.71□□□□□ -0.86
CD44-205ENST00000352818 MROH5Q6ZUA9 1318 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 ACACBO00763 2458 aa9.71□□□□□ -0.86
CD44-205ENST00000352818 ARHGEF15O94989 841 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 ZFYP08048 801 aaPredicted RBP9.7□□□□□ -0.86
CD44-205ENST00000352818 HOXC6P09630 235 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 IFIT1P09914 478 aaKnown RBP9.7□□□□□ -0.86
CD44-205ENST00000352818 ALADP13716 330 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 HERVK_113P62684 666 aa9.7□□□□□ -0.86
CD44-205ENST00000352818 ERVK-9P63128 1117 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms