RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TSC1Q92574 1164 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 MRPL44Q9H9J2 332 aaKnown RBP18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 ASAP1Q9ULH1 1129 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 TMEM94Q12767 1356 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 LOC102724428A0A0B4J2F2 783 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 SIK1P57059 783 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 TBC1D7Q9P0N9 293 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 BIN2Q9UBW5 565 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 PCDHA12Q9UN75 941 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 GCNT3O95395 438 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 TTC31Q49AM3 519 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 C10orf67Q8IYJ2 551 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 CTTNBP2NLQ9P2B4 639 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 ARAP3Q8WWN8 1544 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 WDR17Q8IZU2 1322 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 SND1Q7KZF4 910 aaKnown RBP eCLIP18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 PEX26Q7Z412 305 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 OSBP2Q969R2 916 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 TEKT1Q969V4 418 aa18.95■□□□□ 0.62
TRAPPC11-201ENST00000334690 FMNL1O95466 1100 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 OAS2P29728 719 aaKnown RBP18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 HPDP32754 393 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 DPCR1Q3MIW9 517 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 ZNF365Q70YC5 407 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 SYMPKQ92797 1274 aaKnown RBP18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 ZBTB1Q9Y2K1 713 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 RPN1P04843 607 aaKnown RBP18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 ATP2B4P23634 1241 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 RAD51AP2Q09MP3 1159 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 PSMB7Q99436 277 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 ZCCHC11Q5TAX3 1644 aaKnown RBP18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 ATP10DQ9P241 1426 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 CFBP00751 764 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 GTF2IP78347 998 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 SETDB1Q15047 1291 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 LIN9Q5TKA1 542 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 CUEDC2Q9H467 287 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 CDC42BPAQ5VT25 1732 aa18.94■□□□□ 0.62
TRAPPC11-201ENST00000334690 HEG1Q9ULI3 1381 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 LARGE1O95461 756 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 FERP16591 822 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 ALDH1B1P30837 517 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 RESTQ13127 1097 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 XRCC5P13010 732 aaKnown RBP18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 ERCC3P19447 782 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 USP40Q9NVE5 1235 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 MYCNP04198 464 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 TCP1P17987 556 aaKnown RBP18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 LIFRP42702 1097 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 SWAP70Q9UH65 585 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 EPN1Q9Y6I3 576 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 LAD1O00515 517 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 TECP42680 631 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 CACTINQ8WUQ7 758 aaKnown RBP18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 SMC6Q96SB8 1091 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 IWS1Q96ST2 819 aa18.93■□□□□ 0.62
TRAPPC11-201ENST00000334690 M0R2C6 588 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 STAT1P42224 750 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 SUPT20HQ8NEM7 779 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 PSTPIP2Q9H939 334 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 ARMCX3Q9UH62 379 aaPredicted RBP18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 NRBP1Q9UHY1 535 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 COMMD10Q9Y6G5 202 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 MXRA7P84157 204 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 USH1GQ495M9 461 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 CHURC1Q8WUH1 139 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 KCNG1Q9UIX4 513 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 NCAPD2Q15021 1401 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 H0YIN7 160 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 DAAM2Q86T65 1068 aa18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.92■□□□□ 0.62
TRAPPC11-201ENST00000334690 ALDH3A1P30838 453 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 TCP10Q12799 353 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 MTMR3Q13615 1198 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 KLHL7Q8IXQ5 586 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 TXNDC16Q9P2K2 825 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 GTF2A1P52655 376 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 STRN3Q13033 797 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 NLRP10Q86W26 655 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 GPBP1Q86WP2 473 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 HYOU1Q9Y4L1 999 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 PNPLA6Q8IY17 1366 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 C11orf57Q6ZUT1 292 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 ZNF804BA4D1E1 1349 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 H7C1W4 665 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 MAP3K9P80192 1104 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 DPH6Q7L8W6 267 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 CLTCL1P53675 1640 aa18.91■□□□□ 0.62
TRAPPC11-201ENST00000334690 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 VIMP08670 466 aaKnown RBP18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 SLFN14P0C7P3 912 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 POLD1P28340 1107 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 COPB1P53618 953 aaKnown RBP18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 PPP2R5EQ16537 467 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 GPKOWQ92917 476 aaPredicted RBP eCLIP18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 MKRN1Q9UHC7 482 aaKnown RBP18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 UNC13BO14795 1591 aa18.9■□□□□ 0.62
TRAPPC11-201ENST00000334690 SH2B2O14492 632 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms