RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 DUSP10Q9Y6W6 482 aa8.87□□□□□ -0.99
VMA21-201ENST00000330374 KCNJ18B7U540 433 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 PPFIA4O75335 1185 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 NDUFA10O95299 355 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 ITGA6P23229 1130 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 CORO7P57737 925 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 KCNJ12Q14500 433 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 NELFBQ8WX92 580 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 POM121Q96HA1 1249 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 UBAC1Q9BSL1 405 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 KAT14Q9H8E8 782 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 STRN4Q9NRL3 753 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 HPCAL4Q9UM19 191 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 SAR1BQ9Y6B6 198 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 V9GY48 417 aaPredicted RBP8.86□□□□□ -0.99
VMA21-201ENST00000330374 ERCC3P19447 782 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 SLC7A5Q01650 507 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 STRBPQ96SI9 672 aaKnown RBP8.86□□□□□ -0.99
VMA21-201ENST00000330374 MED4Q9NPJ6 270 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 SMARCAL1Q9NZC9 954 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 TTC26A0AVF1 554 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 GOLGA6CA6NDK9 693 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 A6NJR5 290 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 GOLGA6DP0CG33 693 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 MCM7P33993 719 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 TCIRG1Q13488 830 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 FBXW10Q5XX13 1052 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 SND1Q7KZF4 910 aaKnown RBP eCLIP8.86□□□□□ -0.99
VMA21-201ENST00000330374 CRACR2BQ8N4Y2 399 aaPredicted RBP8.86□□□□□ -0.99
VMA21-201ENST00000330374 JAKMIP2Q96AA8 810 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 GOLGA6AQ9NYA3 693 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 SLC4A4Q9Y6R1 1079 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 DEXIO95424 95 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 PBX1P40424 430 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 USP14P54578 494 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 TTF1Q15361 905 aaPredicted RBP8.86□□□□□ -0.99
VMA21-201ENST00000330374 EZH2Q15910 746 aaKnown RBP8.86□□□□□ -0.99
VMA21-201ENST00000330374 CDKAL1Q5VV42 579 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 FAM76AQ8TAV0 307 aa8.86□□□□□ -0.99
VMA21-201ENST00000330374 SMCR8Q8TEV9 937 aaPredicted RBP8.86□□□□□ -0.99
VMA21-201ENST00000330374 FOXP1Q9H334 677 aaPredicted RBP8.86□□□□□ -0.99
VMA21-201ENST00000330374 REXO2Q9Y3B8 237 aaKnown RBP8.86□□□□□ -0.99
VMA21-201ENST00000330374 CLSTN1O94985 981 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 EIF5P55010 431 aaKnown RBP8.85□□□□□ -0.99
VMA21-201ENST00000330374 SLC4A8Q2Y0W8 1093 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 AKNAD1Q5T1N1 836 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 SELENOOQ9BVL4 669 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 CXCR5P32302 372 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 MNAT1P51948 309 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 PAK1Q13153 545 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 PTGDRQ13258 359 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 MAP9Q49MG5 647 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 ZNF654Q8IZM8 581 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 FANCBQ8NB91 859 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 BCAS4Q8TDM0 211 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 RRP36Q96EU6 259 aaKnown RBP8.85□□□□□ -0.99
VMA21-201ENST00000330374 LUC7L2Q9Y383 392 aaKnown RBP8.85□□□□□ -0.99
VMA21-201ENST00000330374 MEGF6O75095 1541 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 GOLGA6BA6NDN3 693 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 IDEP14735 1019 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 KLK7P49862 253 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 AMPD2Q01433 879 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 KCTD16Q68DU8 428 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 TADA2BQ86TJ2 420 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 SGMS1Q86VZ5 419 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.85□□□□□ -0.99
VMA21-201ENST00000330374 SDR42E1Q8WUS8 393 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 A0A0G2JS52 829 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 GIGYF2Q6Y7W6 1299 aaKnown RBP8.85□□□□□ -0.99
VMA21-201ENST00000330374 ANKLE2Q86XL3 938 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 LCORLQ8N3X6 602 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 LACRTQ9GZZ8 138 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 EHD2Q9NZN4 543 aa8.85□□□□□ -0.99
VMA21-201ENST00000330374 PDE2AO00408 941 aaPredicted RBP8.84□□□□□ -0.99
VMA21-201ENST00000330374 ZEB2O60315 1214 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 ZPR1O75312 459 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 ERLIN2O94905 339 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 IPO7O95373 1038 aaKnown RBP8.84□□□□□ -0.99
VMA21-201ENST00000330374 PLEKHA8P1O95397 391 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 GNGT1P63211 74 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 TCP11X2Q5H9J9 407 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 EFCAB3Q8N7B9 438 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 COG1Q8WTW3 980 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 HDAC7Q8WUI4 952 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 SHISA4Q96DD7 197 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 WDR19Q8NEZ3 1342 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 CYP2D7A0A087X1C5 515 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 EBAG9O00559 213 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 KCTD19Q17RG1 926 aaPredicted RBP8.84□□□□□ -0.99
VMA21-201ENST00000330374 PIK3AP1Q6ZUJ8 805 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 DDX12PQ92771 950 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 FAM107BQ9H098 131 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 XDHP47989 1333 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.84□□□□□ -0.99
VMA21-201ENST00000330374 EXOC5O00471 708 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 TRIM21P19474 475 aaKnown RBP8.84□□□□□ -0.99
VMA21-201ENST00000330374 KRT2P35908 639 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 LIFRP42702 1097 aa8.84□□□□□ -0.99
VMA21-201ENST00000330374 TUBB2AQ13885 445 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms