RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 GPATCH4Q5T3I0 446 aaKnown RBP13.9□□□□□ -0.18
FN1-201ENST00000323926 CTNND2Q9UQB3 1225 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 DDAH1O94760 285 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 C20orf194Q5TEA3 1177 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 RNF10Q8N5U6 811 aaKnown RBP13.9□□□□□ -0.18
FN1-201ENST00000323926 IFIH1Q9BYX4 1025 aaKnown RBP13.9□□□□□ -0.18
FN1-201ENST00000323926 FAM212AQ96EL1 285 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 CSADQ9Y600 493 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 H7C1D1 291 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 GPAA1O43292 621 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 PRPF6O94906 941 aaKnown RBP13.89□□□□□ -0.19
FN1-201ENST00000323926 GCNT3O95395 438 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 ZNF853P0CG23 659 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 PTPREP23469 700 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 RNF14Q9UBS8 474 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 NLRP1Q9C000 1473 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 ATP8B3O60423 1300 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 LETM2Q2VYF4 491 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 OTUD7BQ6GQQ9 843 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 PHLDB3Q6NSJ2 640 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 EDEM3Q9BZQ6 932 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 PALM3A6NDB9 673 aaPredicted RBP13.89□□□□□ -0.19
FN1-201ENST00000323926 CLSTN2Q9H4D0 955 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.89□□□□□ -0.19
FN1-201ENST00000323926 NDUFAB1O14561 156 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 GCFC2P16383 781 aaKnown RBP13.89□□□□□ -0.19
FN1-201ENST00000323926 RSAD2Q8WXG1 361 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 TTC25Q96NG3 672 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 SLC52A2Q9HAB3 445 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 PPANQ9NQ55 473 aaKnown RBP13.89□□□□□ -0.19
FN1-201ENST00000323926 CEP120Q8N960 986 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 ARAP3Q8WWN8 1544 aa13.89□□□□□ -0.19
FN1-201ENST00000323926 TMEM110-MUSTN1A8MSY1 372 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 ITGA6P23229 1130 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 ANKRD20A3Q5VUR7 823 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 RSPH3Q86UC2 560 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 CCDC169A6NNP5 214 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 HSPA6P17066 643 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 WHAMMP3Q1A5X7 153 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 GDPD2Q9HCC8 539 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 LRRIQ1Q96JM4 1722 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 GAS7O60861 476 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 GABPAQ06546 454 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 TTLL7Q6ZT98 887 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 BBS5Q8N3I7 341 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 CDKL2Q92772 493 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 PRPSAP1Q14558 356 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 EFCAB13Q8IY85 973 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.88□□□□□ -0.19
FN1-201ENST00000323926 ASIC3Q9UHC3 531 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 GNPATO15228 680 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 TFCP2Q12800 502 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 KIF22Q14807 665 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 DPP8Q6V1X1 898 aaPredicted RBP13.88□□□□□ -0.19
FN1-201ENST00000323926 LZTFL1Q9NQ48 299 aa13.88□□□□□ -0.19
FN1-201ENST00000323926 MBD4O95243 580 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 SLC8A1P32418 973 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 GARSP41250 739 aaKnown RBP13.87□□□□□ -0.19
FN1-201ENST00000323926 HHATQ5VTY9 493 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 CCDC17Q96LX7 622 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 TUBB6Q9BUF5 446 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 C1orf112Q9NSG2 853 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 USP19O94966 1318 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 FBXO31Q5XUX0 539 aaPredicted RBP13.87□□□□□ -0.19
FN1-201ENST00000323926 ADALQ6DHV7 355 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 PRDM15P57071 1507 aaPredicted RBP13.87□□□□□ -0.19
FN1-201ENST00000323926 ATP5JP18859 108 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 CDC37Q16543 378 aaPredicted RBP13.87□□□□□ -0.19
FN1-201ENST00000323926 CCDC88AQ3V6T2 1871 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 UFL1O94874 794 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 SURF1Q15526 300 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 HSP90AA5PQ58FG0 334 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 CDK12Q9NYV4 1490 aaPredicted RBP13.87□□□□□ -0.19
FN1-201ENST00000323926 TCP1P17987 556 aaKnown RBP13.87□□□□□ -0.19
FN1-201ENST00000323926 LONP1P36776 959 aaKnown RBP13.87□□□□□ -0.19
FN1-201ENST00000323926 ODR4Q5SWX8 454 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 ISM2Q6H9L7 571 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 C8orf37Q96NL8 207 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 YARSP54577 528 aaKnown RBP13.87□□□□□ -0.19
FN1-201ENST00000323926 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
FN1-201ENST00000323926 NECAB1Q8N987 351 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 SAR1BQ9Y6B6 198 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 SGSM2O43147 1006 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 HOXC9P31274 260 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 PPARGP37231 505 aaPredicted RBP13.87□□□□□ -0.19
FN1-201ENST00000323926 MPNDQ8N594 471 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 TSC1Q92574 1164 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 STK17AQ9UEE5 414 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 COL4A3BPQ9Y5P4 624 aa13.87□□□□□ -0.19
FN1-201ENST00000323926 SLC27A2O14975 620 aa13.86□□□□□ -0.19
FN1-201ENST00000323926 IGSF3O75054 1194 aa13.86□□□□□ -0.19
FN1-201ENST00000323926 TNNC2P02585 160 aa13.86□□□□□ -0.19
FN1-201ENST00000323926 BIRC2Q13490 618 aa13.86□□□□□ -0.19
FN1-201ENST00000323926 FAM160B1Q5W0V3 765 aa13.86□□□□□ -0.19
FN1-201ENST00000323926 CEP57Q86XR8 500 aa13.86□□□□□ -0.19
FN1-201ENST00000323926 MAP7D3Q8IWC1 876 aa13.86□□□□□ -0.19
FN1-201ENST00000323926 MICALL1Q8N3F8 863 aa13.86□□□□□ -0.19
FN1-201ENST00000323926 BAG5Q9UL15 447 aa13.86□□□□□ -0.19
FN1-201ENST00000323926 UNC13BO14795 1591 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms