RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 NCAPH2Q6IBW4 605 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 NEK8Q86SG6 692 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 ZNF397Q8NF99 534 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 PDCL3Q9H2J4 239 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 CTNND2Q9UQB3 1225 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 NFE2L3Q9Y4A8 694 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 UQCRHLA0A096LP55 91 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 USP17L5A8MUK1 530 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 UQCRHP07919 91 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 NLRP12P59046 1061 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 SNAP25P60880 206 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 CABP7Q86V35 215 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 SYMPKQ92797 1274 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 ZBTB12Q9Y330 459 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 MRC1P22897 1456 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 WDR19Q8NEZ3 1342 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 MYCLP12524 364 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 TRIM21P19474 475 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 HSP90AA2PQ14568 343 aaPredicted RBP10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 SYCP1Q15431 976 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 TDRD12Q587J7 1177 aaKnown RBP10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 CCDC70Q6NSX1 233 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 FBXO11Q86XK2 927 aa10.48□□□□□ -0.73
TMEM39A-201ENST00000319172 A0A1W2PQ27 194 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 A0A1W2PQ64 194 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 A0A1W2PQD8 194 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 ASPRV1Q53RT3 343 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 EAPPQ56P03 285 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 GPATCH4Q5T3I0 446 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 KRBA2Q6ZNG9 492 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 GRAMD1CQ8IYS0 662 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 CHURC1Q8WUH1 139 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 PCDHA5Q9Y5H7 936 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 AKR1B1P15121 316 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 GPR162Q16538 588 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 STAG2Q8N3U4 1231 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 PCDHA4Q9UN74 947 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 KIF28PB7ZC32 967 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 CTDNEP1O95476 244 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 ALAS1P13196 640 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 SEPT2Q15019 361 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 KARSQ15046 597 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 PRR16Q569H4 304 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 TMOD4Q9NZQ9 345 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 SCAF8Q9UPN6 1271 aaKnown RBP10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 SPAG1Q07617 926 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 TBC1D10BQ4KMP7 808 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 C17orf53Q8N3J3 647 aaPredicted RBP10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 KCNB2Q92953 911 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 GLT8D2Q9H1C3 349 aa10.47□□□□□ -0.73
TMEM39A-201ENST00000319172 FLT1P17948 1338 aa10.46□□□□□ -0.73
TMEM39A-201ENST00000319172 FSD2A1L4K1 749 aa10.46□□□□□ -0.73
TMEM39A-201ENST00000319172 ORC4O43929 436 aa10.46□□□□□ -0.73
TMEM39A-201ENST00000319172 OR52Z1P0C646 297 aa10.46□□□□□ -0.73
TMEM39A-201ENST00000319172 SRGNP10124 158 aa10.46□□□□□ -0.73
TMEM39A-201ENST00000319172 COL9A3Q14050 684 aaPredicted RBP10.46□□□□□ -0.73
TMEM39A-201ENST00000319172 NOLC1Q14978 699 aaKnown RBP eCLIP10.46□□□□□ -0.73
TMEM39A-201ENST00000319172 FAM114A1Q8IWE2 563 aa10.46□□□□□ -0.73
TMEM39A-201ENST00000319172 VPS16Q9H269 839 aa10.46□□□□□ -0.73
TMEM39A-201ENST00000319172 TBC1D7Q9P0N9 293 aa10.46□□□□□ -0.73
TMEM39A-201ENST00000319172 UBE2Q2LH0YL09 131 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 POLRMTO00411 1230 aaKnown RBP10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 ZSCAN12O43309 604 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 URI1O94763 535 aaPredicted RBP10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 UBXN2AP68543 259 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 FANCCQ00597 558 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 FOXP4Q8IVH2 680 aaPredicted RBP10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 CCDC150Q8NCX0 1101 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 TBCKQ8TEA7 893 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 SCLT1Q96NL6 688 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 RIOK1Q9BRS2 568 aaKnown RBP10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 MRVI1Q9Y6F6 885 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 FDPSP14324 419 aaKnown RBP10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 ZNF75DP51815 510 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 UBE2SQ16763 222 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 MLKLQ8NB16 471 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 EEF2KMTQ96G04 330 aa10.46□□□□□ -0.74
TMEM39A-201ENST00000319172 FLOT1O75955 427 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 MAEAQ7L5Y9 396 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 EPSTI1Q96J88 318 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 CTAGE1Q96RT6 745 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 AMNQ9BXJ7 453 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 PPP6R2O75170 966 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 FAM13AO94988 1023 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 BMP3P12645 472 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 DPEP1P16444 411 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 DPCR1Q3MIW9 517 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 TMEM87AQ8NBN3 555 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 PCDHA12Q9UN75 941 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 BACH1O14867 736 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 COBLO75128 1261 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 DNA2P51530 1060 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 UBXN1Q04323 297 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 SPA17Q15506 151 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 SRBD1Q8N5C6 995 aaKnown RBP10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 PAF1Q8N7H5 531 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 KIF18AQ8NI77 898 aa10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 LUC7LQ9NQ29 371 aaKnown RBP10.45□□□□□ -0.74
TMEM39A-201ENST00000319172 HPS5Q9UPZ3 1129 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms