RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 ADAMTS5Q9UNA0 930 aa19.89■□□□□ 0.77
TRAPPC1-201ENST00000303731 FRMPD3Q5JV73 1810 aa19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 SALL3Q9BXA9 1300 aa19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 MNX1P50219 401 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 PDE4BQ07343 736 aa19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 ZMYM1Q5SVZ6 1142 aa19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 LHX8Q68G74 356 aa19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 NCAPG2Q86XI2 1143 aa19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 IFNL3Q8IZI9 196 aa19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 FLRT1Q9NZU1 646 aa19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 PPP1R9AQ9ULJ8 1098 aa19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 COL11A1P12107 1806 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC1-201ENST00000303731 MYH4Q9Y623 1939 aa19.87■□□□□ 0.77
TRAPPC1-201ENST00000303731 A0A1W2PPC1 479 aa19.87■□□□□ 0.77
TRAPPC1-201ENST00000303731 FCER1AP12319 257 aa19.87■□□□□ 0.77
TRAPPC1-201ENST00000303731 FXR1P51114 621 aaKnown RBP eCLIP19.87■□□□□ 0.77
TRAPPC1-201ENST00000303731 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
TRAPPC1-201ENST00000303731 NPLOC4Q8TAT6 608 aa19.87■□□□□ 0.77
TRAPPC1-201ENST00000303731 OTUD7AQ8TE49 926 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC1-201ENST00000303731 RAD21O60216 631 aa19.86■□□□□ 0.77
TRAPPC1-201ENST00000303731 IGHA2P01877 340 aa19.86■□□□□ 0.77
TRAPPC1-201ENST00000303731 TMEM132BQ14DG7 1078 aa19.86■□□□□ 0.77
TRAPPC1-201ENST00000303731 PPP4R3BQ5MIZ7 849 aa19.86■□□□□ 0.77
TRAPPC1-201ENST00000303731 RIOX2Q8IUF8 465 aa19.86■□□□□ 0.77
TRAPPC1-201ENST00000303731 EVI5LQ96CN4 794 aa19.86■□□□□ 0.77
TRAPPC1-201ENST00000303731 NAPBQ9H115 298 aa19.86■□□□□ 0.77
TRAPPC1-201ENST00000303731 STAP2Q9UGK3 403 aa19.86■□□□□ 0.77
TRAPPC1-201ENST00000303731 DDX20Q9UHI6 824 aaKnown RBP19.86■□□□□ 0.77
TRAPPC1-201ENST00000303731 PLIN4Q96Q06 1357 aa19.85■□□□□ 0.77
TRAPPC1-201ENST00000303731 ZNFX1Q9P2E3 1918 aaKnown RBP19.85■□□□□ 0.77
TRAPPC1-201ENST00000303731 VWA5AO00534 786 aa19.85■□□□□ 0.77
TRAPPC1-201ENST00000303731 COL6A1P12109 1028 aa19.85■□□□□ 0.77
TRAPPC1-201ENST00000303731 FAM83BQ5T0W9 1011 aa19.85■□□□□ 0.77
TRAPPC1-201ENST00000303731 MKL1Q969V6 931 aa19.85■□□□□ 0.77
TRAPPC1-201ENST00000303731 SLF1Q9BQI6 1058 aa19.85■□□□□ 0.77
TRAPPC1-201ENST00000303731 PRO3102Q9H379 93 aa19.85■□□□□ 0.77
TRAPPC1-201ENST00000303731 RBM27Q9P2N5 1060 aaKnown RBP19.85■□□□□ 0.77
TRAPPC1-201ENST00000303731 IGKV6D-41A0A0C4DH26 115 aa19.84■□□□□ 0.77
TRAPPC1-201ENST00000303731 F5H6K3 240 aa19.84■□□□□ 0.77
TRAPPC1-201ENST00000303731 TTLL1O95922 423 aa19.84■□□□□ 0.77
TRAPPC1-201ENST00000303731 CYBAP13498 195 aa19.84■□□□□ 0.77
TRAPPC1-201ENST00000303731 CNGA1P29973 690 aa19.84■□□□□ 0.77
TRAPPC1-201ENST00000303731 CYP2C19P33261 490 aa19.84■□□□□ 0.77
TRAPPC1-201ENST00000303731 STAT3P40763 770 aa19.84■□□□□ 0.77
TRAPPC1-201ENST00000303731 KLRC3Q07444 240 aa19.84■□□□□ 0.77
TRAPPC1-201ENST00000303731 SAMD1Q6SPF0 538 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC1-201ENST00000303731 STK11IPQ8N1F8 1099 aa19.84■□□□□ 0.77
TRAPPC1-201ENST00000303731 TSPY3P0CV98 308 aa19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 TSPY8P0CW00 308 aa19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 PPARAQ07869 468 aa19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 PRPF38AQ8NAV1 312 aaKnown RBP19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 SEC62Q99442 399 aaKnown RBP19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 FBXO28Q9NVF7 368 aa19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 MTMR4Q9NYA4 1195 aa19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 CLIP2Q9UDT6 1046 aa19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 NRBP1Q9UHY1 535 aa19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 ZNF214Q9UL59 606 aaPredicted RBP19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 DIS3Q9Y2L1 958 aaKnown RBP19.83■□□□□ 0.77
TRAPPC1-201ENST00000303731 PFASO15067 1338 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 COBLO75128 1261 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 PRDM1O75626 825 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 NDUFB10O96000 172 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 PDE1AP54750 535 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 KCTD2Q14681 263 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 C7orf61Q8IZ16 206 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 GMCL1P1Q8NEA9 526 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 NEDD1Q8NHV4 660 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 CEP95Q96GE4 821 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 MAML3Q96JK9 1138 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 MMP19Q99542 508 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 TEX13BQ9BXU2 312 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 HELLSQ9NRZ9 838 aa19.82■□□□□ 0.76
TRAPPC1-201ENST00000303731 DNM1LO00429 736 aa19.81■□□□□ 0.76
TRAPPC1-201ENST00000303731 SEPT4O43236 478 aa19.81■□□□□ 0.76
TRAPPC1-201ENST00000303731 ARRDC4Q8NCT1 418 aa19.81■□□□□ 0.76
TRAPPC1-201ENST00000303731 REPS2Q8NFH8 660 aa19.81■□□□□ 0.76
TRAPPC1-201ENST00000303731 RWDD1Q9H446 243 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC1-201ENST00000303731 PLXNA1Q9UIW2 1896 aa19.8■□□□□ 0.76
TRAPPC1-201ENST00000303731 ATP2A1O14983 1001 aa19.8■□□□□ 0.76
TRAPPC1-201ENST00000303731 ZBED4O75132 1171 aa19.8■□□□□ 0.76
TRAPPC1-201ENST00000303731 FDX1P10109 184 aa19.8■□□□□ 0.76
TRAPPC1-201ENST00000303731 YTHDC1Q96MU7 727 aaKnown RBP19.8■□□□□ 0.76
TRAPPC1-201ENST00000303731 FEM1BQ9UK73 627 aa19.8■□□□□ 0.76
TRAPPC1-201ENST00000303731 CTDP1Q9Y5B0 961 aaPredicted RBP19.8■□□□□ 0.76
TRAPPC1-201ENST00000303731 BMP8BP34820 402 aa19.79■□□□□ 0.76
TRAPPC1-201ENST00000303731 TRPV1Q8NER1 839 aa19.79■□□□□ 0.76
TRAPPC1-201ENST00000303731 NUP88Q99567 741 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC1-201ENST00000303731 OAZ1P54368 228 aa19.78■□□□□ 0.76
TRAPPC1-201ENST00000303731 TFAP4Q01664 338 aa19.78■□□□□ 0.76
TRAPPC1-201ENST00000303731 SNRNP48Q6IEG0 339 aaKnown RBP19.78■□□□□ 0.76
TRAPPC1-201ENST00000303731 SMC5Q8IY18 1101 aa19.78■□□□□ 0.76
TRAPPC1-201ENST00000303731 MSL3Q8N5Y2 521 aaKnown RBP19.78■□□□□ 0.76
TRAPPC1-201ENST00000303731 GDF15Q99988 308 aa19.78■□□□□ 0.76
TRAPPC1-201ENST00000303731 ANAPC4Q9UJX5 808 aa19.78■□□□□ 0.76
TRAPPC1-201ENST00000303731 BMP3P12645 472 aa19.77■□□□□ 0.76
TRAPPC1-201ENST00000303731 ALX1Q15699 326 aa19.77■□□□□ 0.76
TRAPPC1-201ENST00000303731 ZNF792Q3KQV3 632 aa19.77■□□□□ 0.76
TRAPPC1-201ENST00000303731 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.77■□□□□ 0.76
TRAPPC1-201ENST00000303731 TINF2Q9BSI4 451 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms