RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 MAGEA1P43355 309 aa19.13■□□□□ 0.65
SHANK1-201ENST00000293441 MCF2L2Q86YR7 1114 aa19.13■□□□□ 0.65
SHANK1-201ENST00000293441 RRAGAQ7L523 313 aa19.13■□□□□ 0.65
SHANK1-201ENST00000293441 ARFGAP2Q8N6H7 521 aa19.13■□□□□ 0.65
SHANK1-201ENST00000293441 EAF2Q96CJ1 260 aaPredicted RBP19.13■□□□□ 0.65
SHANK1-201ENST00000293441 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
SHANK1-201ENST00000293441 K7ENM7 598 aa19.13■□□□□ 0.65
SHANK1-201ENST00000293441 TYW1BQ6NUM6 668 aa19.13■□□□□ 0.65
SHANK1-201ENST00000293441 KLHL7Q8IXQ5 586 aa19.13■□□□□ 0.65
SHANK1-201ENST00000293441 SUGCTQ9HAC7 445 aa19.13■□□□□ 0.65
SHANK1-201ENST00000293441 SAMD9Q5K651 1589 aa19.13■□□□□ 0.65
SHANK1-201ENST00000293441 ZMYM6O95789 1325 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 TMEM232C9JQI7 657 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 HSPD1P10809 573 aaKnown RBP19.12■□□□□ 0.65
SHANK1-201ENST00000293441 HSPA1LP34931 641 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 ZHX1Q9UKY1 873 aaPredicted RBP19.12■□□□□ 0.65
SHANK1-201ENST00000293441 MTX1Q13505 466 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 MMS19Q96T76 1030 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 KCNQ4P56696 695 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 SLFN12Q8IYM2 578 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 PHKA1P46020 1223 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 SLFN13Q68D06 897 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 SESTD1Q86VW0 696 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 GABPB2Q8TAK5 448 aaPredicted RBP19.12■□□□□ 0.65
SHANK1-201ENST00000293441 PALM3A6NDB9 673 aaPredicted RBP19.12■□□□□ 0.65
SHANK1-201ENST00000293441 ADORA1P30542 326 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 YWHAEP62258 255 aaKnown RBP19.12■□□□□ 0.65
SHANK1-201ENST00000293441 PANK4Q9NVE7 773 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 CD2APQ9Y5K6 639 aa19.12■□□□□ 0.65
SHANK1-201ENST00000293441 RXRBP28702 533 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 ZNF75DP51815 510 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 FAM196AQ6ZSG2 479 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 FANCBQ8NB91 859 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 TEKT3Q9BXF9 490 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 IFRD2Q12894 506 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-201ENST00000293441 VPS52Q8N1B4 723 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 KCNG1Q9UIX4 513 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 XDHP47989 1333 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 MYOM2P54296 1465 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 INSRP06213 1382 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 INTS8Q75QN2 995 aaKnown RBP19.11■□□□□ 0.65
SHANK1-201ENST00000293441 PLA2G4DQ86XP0 818 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-201ENST00000293441 MED23Q9ULK4 1368 aa19.11■□□□□ 0.65
SHANK1-201ENST00000293441 FAM193BQ96PV7 902 aaPredicted RBP19.1■□□□□ 0.65
SHANK1-201ENST00000293441 PUS3Q9BZE2 481 aaKnown RBP19.1■□□□□ 0.65
SHANK1-201ENST00000293441 STIM2Q9P246 746 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 GNA14O95837 355 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 CLCN1P35523 988 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 SPICE1Q8N0Z3 855 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 GPATCH11Q8N954 259 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 SSH3Q8TE77 659 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 SLF1Q9BQI6 1058 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 HAUS2Q9NVX0 235 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 FGAP02671 866 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 SYCE1Q8N0S2 351 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 MICALL1Q8N3F8 863 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 CCDC89Q8N998 374 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 IWS1Q96ST2 819 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 GIPC1O14908 333 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 NR1I2O75469 434 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 PEX26Q7Z412 305 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 NEK8Q86SG6 692 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 TMTC1Q8IUR5 882 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 NOSTRINQ8IVI9 506 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 FAM135BQ49AJ0 1406 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 NEO1Q92859 1461 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 ADD1P35611 737 aaKnown RBP19.1■□□□□ 0.65
SHANK1-201ENST00000293441 PPARDQ03181 441 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 ERFEQ4G0M1 354 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 CCDC105Q8IYK2 499 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 MYOCDQ8IZQ8 938 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 DBNDD1Q9H9R9 158 aa19.1■□□□□ 0.65
SHANK1-201ENST00000293441 TNNC2P02585 160 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 SCG2P13521 617 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 YEATS2Q9ULM3 1422 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 EBAG9O00559 213 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 XRCC5P13010 732 aaKnown RBP19.09■□□□□ 0.65
SHANK1-201ENST00000293441 POLGP54098 1239 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-201ENST00000293441 CCDC110Q8TBZ0 833 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 ADPGKQ9BRR6 497 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 ABCC4O15439 1325 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 SERPINB2P05120 415 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 IFT20Q8IY31 132 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 GSDMBQ8TAX9 411 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 U2AF1L4Q8WU68 220 aaKnown RBP19.09■□□□□ 0.65
SHANK1-201ENST00000293441 BSPRYQ5W0U4 402 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 ZNF526Q8TF50 670 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-201ENST00000293441 MCTP2Q6DN12 878 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 SCYL2Q6P3W7 929 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 CSRNP1Q96S65 589 aa19.09■□□□□ 0.65
SHANK1-201ENST00000293441 TUBBP07437 444 aa19.08■□□□□ 0.65
SHANK1-201ENST00000293441 OR52Z1P0C646 297 aa19.08■□□□□ 0.65
SHANK1-201ENST00000293441 ZBTB1Q9Y2K1 713 aa19.08■□□□□ 0.65
SHANK1-201ENST00000293441 PROSER3Q2NL68 480 aa19.08■□□□□ 0.65
SHANK1-201ENST00000293441 MYSM1Q5VVJ2 828 aa19.08■□□□□ 0.64
SHANK1-201ENST00000293441 PDE8BO95263 885 aa19.08■□□□□ 0.64
SHANK1-201ENST00000293441 PFKFB1P16118 471 aa19.08■□□□□ 0.64
SHANK1-201ENST00000293441 RPS6KA1Q15418 735 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms