RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 SPDYE2BA6NHP3 402 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 RAD17O75943 681 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 SPDYE6P0CI01 402 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 SNHG28P0DPA3 235 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 FKBP1CQ5VVH2 108 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 RESP18Q5W5W9 173 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 TMEM179Q6ZVK1 233 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 MTMR14Q8NCE2 650 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 FERMT2Q96AC1 680 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 PRMT6Q96LA8 375 aaPredicted RBP21.71■■□□□ 1.07
VBP1-201ENST00000286428 NYAP2Q9P242 653 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 MTMR7Q9Y216 660 aa21.71■■□□□ 1.07
VBP1-201ENST00000286428 PFKFB1P16118 471 aa21.7■■□□□ 1.06
VBP1-201ENST00000286428 TNIP1Q15025 636 aa21.7■■□□□ 1.06
VBP1-201ENST00000286428 USP17L2Q6R6M4 530 aa21.7■■□□□ 1.06
VBP1-201ENST00000286428 TNFRSF25Q93038 417 aa21.7■■□□□ 1.06
VBP1-201ENST00000286428 MKL1Q969V6 931 aa21.7■■□□□ 1.06
VBP1-201ENST00000286428 RIOX1Q9H6W3 641 aa21.7■■□□□ 1.06
VBP1-201ENST00000286428 ANO10Q9NW15 660 aa21.7■■□□□ 1.06
VBP1-201ENST00000286428 DDTLA6NHG4 134 aaPredicted RBP21.69■■□□□ 1.06
VBP1-201ENST00000286428 CYTH3O43739 400 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 STX1AQ16623 288 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 HEATR3Q7Z4Q2 680 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 NAT10Q9H0A0 1025 aaKnown RBP21.69■■□□□ 1.06
VBP1-201ENST00000286428 C6orf50Q9HD87 102 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 HPSEQ9Y251 543 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 PCDHB6Q9Y5E3 794 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 SCN9AQ15858 1988 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 CACNB3P54284 484 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 TTC38Q5R3I4 469 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 ZFPM1Q8IX07 1006 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 PIBF1Q8WXW3 757 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 SYNPO2Q9UMS6 1093 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 MRVI1Q9Y6F6 885 aa21.69■■□□□ 1.06
VBP1-201ENST00000286428 MYH6P13533 1939 aa21.68■■□□□ 1.06
VBP1-201ENST00000286428 CCDC194A0A1B0GVG4 234 aa21.68■■□□□ 1.06
VBP1-201ENST00000286428 USP17L5A8MUK1 530 aa21.68■■□□□ 1.06
VBP1-201ENST00000286428 GOLGA8HP0CJ92 632 aa21.68■■□□□ 1.06
VBP1-201ENST00000286428 NPY5RQ15761 445 aa21.68■■□□□ 1.06
VBP1-201ENST00000286428 HS1BP3Q53T59 392 aa21.68■■□□□ 1.06
VBP1-201ENST00000286428 CIAPIN1Q6FI81 312 aa21.68■■□□□ 1.06
VBP1-201ENST00000286428 SHC4Q6S5L8 630 aa21.68■■□□□ 1.06
VBP1-201ENST00000286428 FAM151AQ8WW52 585 aa21.68■■□□□ 1.06
VBP1-201ENST00000286428 PYM1Q9BRP8 204 aaKnown RBP21.68■■□□□ 1.06
VBP1-201ENST00000286428 ZMYND12Q9H0C1 365 aa21.68■■□□□ 1.06
VBP1-201ENST00000286428 STXBP3O00186 592 aa21.67■■□□□ 1.06
VBP1-201ENST00000286428 ATP2B1P20020 1258 aa21.67■■□□□ 1.06
VBP1-201ENST00000286428 NAPAP54920 295 aa21.67■■□□□ 1.06
VBP1-201ENST00000286428 RBM26Q5T8P6 1007 aaKnown RBP21.67■■□□□ 1.06
VBP1-201ENST00000286428 WWC2Q6AWC2 1192 aa21.67■■□□□ 1.06
VBP1-201ENST00000286428 KANK3Q6NY19 840 aa21.67■■□□□ 1.06
VBP1-201ENST00000286428 PIK3AP1Q6ZUJ8 805 aa21.67■■□□□ 1.06
VBP1-201ENST00000286428 SHISA4Q96DD7 197 aa21.67■■□□□ 1.06
VBP1-201ENST00000286428 PDLIM2Q96JY6 352 aa21.67■■□□□ 1.06
VBP1-201ENST00000286428 FBXO2Q9UK22 296 aaPredicted RBP21.67■■□□□ 1.06
VBP1-201ENST00000286428 KCNH3Q9ULD8 1083 aa21.67■■□□□ 1.06
VBP1-201ENST00000286428 PCDHAC2Q9Y5I4 1007 aa21.67■■□□□ 1.06
VBP1-201ENST00000286428 ESYT2A0FGR8 921 aa21.66■■□□□ 1.06
VBP1-201ENST00000286428 RPS12P25398 132 aaKnown RBP21.66■■□□□ 1.06
VBP1-201ENST00000286428 ZNF543Q08ER8 600 aa21.66■■□□□ 1.06
VBP1-201ENST00000286428 ABCB5Q2M3G0 1257 aa21.66■■□□□ 1.06
VBP1-201ENST00000286428 ANO6Q4KMQ2 910 aa21.66■■□□□ 1.06
VBP1-201ENST00000286428 LRRC47Q8N1G4 583 aaKnown RBP21.66■■□□□ 1.06
VBP1-201ENST00000286428 CSRNP1Q96S65 589 aa21.66■■□□□ 1.06
VBP1-201ENST00000286428 KIAA1468Q9P260 1216 aa21.66■■□□□ 1.06
VBP1-201ENST00000286428 SH3BP5LQ7L8J4 393 aa21.66■■□□□ 1.06
VBP1-201ENST00000286428 KRT25Q7Z3Z0 450 aa21.66■■□□□ 1.06
VBP1-201ENST00000286428 FAM83AQ86UY5 434 aa21.66■■□□□ 1.06
VBP1-201ENST00000286428 DCAF4Q8WV16 495 aa21.66■■□□□ 1.06
VBP1-201ENST00000286428 ZNF70Q9UC06 446 aaPredicted RBP21.66■■□□□ 1.06
VBP1-201ENST00000286428 PPP1R1BQ9UD71 204 aaPredicted RBP21.66■■□□□ 1.06
VBP1-201ENST00000286428 LTBP3Q9NS15 1303 aa21.65■■□□□ 1.06
VBP1-201ENST00000286428 ZNF165P49910 485 aa21.65■■□□□ 1.06
VBP1-201ENST00000286428 ATP2B2Q01814 1243 aa21.65■■□□□ 1.06
VBP1-201ENST00000286428 SPDYE2Q495Y8 402 aa21.65■■□□□ 1.06
VBP1-201ENST00000286428 ARL6IP4Q66PJ3 421 aaKnown RBP21.65■■□□□ 1.06
VBP1-201ENST00000286428 PPP1R18Q6NYC8 613 aa21.65■■□□□ 1.06
VBP1-201ENST00000286428 GPKOWQ92917 476 aaPredicted RBP eCLIP21.65■■□□□ 1.06
VBP1-201ENST00000286428 DNAJC18Q9H819 358 aa21.65■■□□□ 1.06
VBP1-201ENST00000286428 ZNF646O15015 1829 aaPredicted RBP21.64■■□□□ 1.06
VBP1-201ENST00000286428 PSME4Q14997 1843 aa21.64■■□□□ 1.06
VBP1-201ENST00000286428 TNNI2P48788 182 aa21.64■■□□□ 1.05
VBP1-201ENST00000286428 EIF6P56537 245 aaKnown RBP21.64■■□□□ 1.05
VBP1-201ENST00000286428 CXCL9Q07325 125 aa21.64■■□□□ 1.05
VBP1-201ENST00000286428 R3HDM1Q15032 1099 aaKnown RBP21.64■■□□□ 1.05
VBP1-201ENST00000286428 HOMER1Q86YM7 354 aa21.64■■□□□ 1.05
VBP1-201ENST00000286428 CNNM3Q8NE01 707 aa21.64■■□□□ 1.05
VBP1-201ENST00000286428 CLIC6Q96NY7 704 aa21.64■■□□□ 1.05
VBP1-201ENST00000286428 GLT8D2Q9H1C3 349 aa21.64■■□□□ 1.05
VBP1-201ENST00000286428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.64■■□□□ 1.05
VBP1-201ENST00000286428 PNMA6FA0A0J9YX94 578 aa21.63■■□□□ 1.05
VBP1-201ENST00000286428 SMCO2A6NFE2 343 aa21.63■■□□□ 1.05
VBP1-201ENST00000286428 LAD1O00515 517 aa21.63■■□□□ 1.05
VBP1-201ENST00000286428 ATP2C1P98194 919 aaPredicted RBP21.63■■□□□ 1.05
VBP1-201ENST00000286428 ICA1Q05084 483 aa21.63■■□□□ 1.05
VBP1-201ENST00000286428 ORC2Q13416 577 aaPredicted RBP21.63■■□□□ 1.05
VBP1-201ENST00000286428 CCDC96Q2M329 555 aa21.63■■□□□ 1.05
VBP1-201ENST00000286428 CEP57L1Q8IYX8 460 aa21.63■■□□□ 1.05
VBP1-201ENST00000286428 VAT1LQ9HCJ6 419 aa21.63■■□□□ 1.05
VBP1-201ENST00000286428 USP25Q9UHP3 1055 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms