RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 CTAGE15A4D2H0 777 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 CTAGE8P0CG41 777 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 USP5P45974 858 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 MUM1L1Q5H9M0 696 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 CTAGE6Q86UF2 777 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 CTAGE4Q8IX94 777 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 HNRNPLLQ8WVV9 542 aaKnown RBP19.26■□□□□ 0.67
SPG7-201ENST00000268704 NELFBQ8WX92 580 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 FEZ2Q9UHY8 353 aaPredicted RBP19.26■□□□□ 0.67
SPG7-201ENST00000268704 COL4A1P02462 1669 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 KCNJ18B7U540 433 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 KCNJ12Q14500 433 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 PDXDC2PQ6P474 469 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 ZNF34Q8IZ26 560 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 CERKQ8TCT0 537 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 EEF2KMTQ96G04 330 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 REXO2Q9Y3B8 237 aaKnown RBP19.26■□□□□ 0.67
SPG7-201ENST00000268704 BCL9LQ86UU0 1499 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 PLCH1Q4KWH8 1693 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 MAGEB6P1A0A0J9YX57 407 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 PES1O00541 588 aaKnown RBP19.26■□□□□ 0.67
SPG7-201ENST00000268704 TRIM66O15016 1216 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 PRPF3O43395 683 aaKnown RBP19.26■□□□□ 0.67
SPG7-201ENST00000268704 GYG1P46976 350 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 TCP11X2Q5H9J9 407 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 CATIPQ7Z7H3 387 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 TMTC1Q8IUR5 882 aa19.26■□□□□ 0.67
SPG7-201ENST00000268704 A0A0G2JS52 829 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 ATP2C1P98194 919 aaPredicted RBP19.25■□□□□ 0.67
SPG7-201ENST00000268704 TROAPQ12815 778 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 PAK1Q13153 545 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 CASP8Q14790 479 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 SLC4A8Q2Y0W8 1093 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 LIMA1Q9UHB6 759 aaKnown RBP19.25■□□□□ 0.67
SPG7-201ENST00000268704 ITIH6Q6UXX5 1313 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 FECHP22830 423 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 UBXN1Q04323 297 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 CYP26C1Q6V0L0 522 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 CCDC102AQ96A19 550 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 NHSL1Q5SYE7 1610 aa19.25■□□□□ 0.67
SPG7-201ENST00000268704 LRRIQ3A6PVS8 624 aaPredicted RBP19.24■□□□□ 0.67
SPG7-201ENST00000268704 SEMA3EO15041 775 aa19.24■□□□□ 0.67
SPG7-201ENST00000268704 CHRNDQ07001 517 aa19.24■□□□□ 0.67
SPG7-201ENST00000268704 FOXR1Q6PIV2 292 aa19.24■□□□□ 0.67
SPG7-201ENST00000268704 SRBD1Q8N5C6 995 aaKnown RBP19.24■□□□□ 0.67
SPG7-201ENST00000268704 CICQ96RK0 1608 aaPredicted RBP19.24■□□□□ 0.67
SPG7-201ENST00000268704 SRGAP2O75044 1071 aa19.24■□□□□ 0.67
SPG7-201ENST00000268704 RCAN1P53805 252 aa19.24■□□□□ 0.67
SPG7-201ENST00000268704 IQUBQ8NA54 791 aa19.24■□□□□ 0.67
SPG7-201ENST00000268704 CCDC51Q96ER9 411 aa19.24■□□□□ 0.67
SPG7-201ENST00000268704 MYO6Q9UM54 1294 aa19.24■□□□□ 0.67
SPG7-201ENST00000268704 CNTNAP5Q8WYK1 1306 aa19.24■□□□□ 0.67
SPG7-201ENST00000268704 ERLIN1O75477 346 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 PRCPP42785 496 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 AMPD2Q01433 879 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 PMS1P54277 932 aaKnown RBP19.23■□□□□ 0.67
SPG7-201ENST00000268704 CT47A1Q5JQC4 288 aaPredicted RBP19.23■□□□□ 0.67
SPG7-201ENST00000268704 FAM47AQ5JRC9 791 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 GDAP1L1Q96MZ0 367 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 BRMS1Q9HCU9 246 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 RWDD2AQ9UIY3 292 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 DUOX1Q9NRD9 1551 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 TTC26A0AVF1 554 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 TMTC3Q6ZXV5 915 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 C10orf67Q8IYJ2 551 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 PLIN2Q99541 437 aa19.23■□□□□ 0.67
SPG7-201ENST00000268704 RIOK1Q9BRS2 568 aaKnown RBP19.23■□□□□ 0.67
SPG7-201ENST00000268704 COL1A1P02452 1464 aaPredicted RBP19.22■□□□□ 0.67
SPG7-201ENST00000268704 PP2D1A8MPX8 630 aa19.22■□□□□ 0.67
SPG7-201ENST00000268704 POTEB2H3BUK9 544 aa19.22■□□□□ 0.67
SPG7-201ENST00000268704 NDUFA10O95299 355 aa19.22■□□□□ 0.67
SPG7-201ENST00000268704 ACTN2P35609 894 aa19.22■□□□□ 0.67
SPG7-201ENST00000268704 NLRP5P59047 1200 aa19.22■□□□□ 0.67
SPG7-201ENST00000268704 WHAMMP3Q1A5X7 153 aa19.22■□□□□ 0.67
SPG7-201ENST00000268704 IRF2BP1Q8IU81 584 aa19.22■□□□□ 0.67
SPG7-201ENST00000268704 GOLGA5Q8TBA6 731 aa19.22■□□□□ 0.67
SPG7-201ENST00000268704 RASGRP4Q8TDF6 673 aa19.22■□□□□ 0.67
SPG7-201ENST00000268704 LRRC10BA6NIK2 292 aa19.21■□□□□ 0.67
SPG7-201ENST00000268704 ZMYND10O75800 440 aa19.21■□□□□ 0.67
SPG7-201ENST00000268704 RPN1P04843 607 aaKnown RBP19.21■□□□□ 0.67
SPG7-201ENST00000268704 CAPZA3Q96KX2 299 aa19.21■□□□□ 0.67
SPG7-201ENST00000268704 MTA3Q9BTC8 594 aa19.21■□□□□ 0.67
SPG7-201ENST00000268704 EPN1Q9Y6I3 576 aaPredicted RBP19.21■□□□□ 0.67
SPG7-201ENST00000268704 IGHMBP2P38935 993 aaKnown RBP19.21■□□□□ 0.67
SPG7-201ENST00000268704 ZNF384Q8TF68 577 aa19.21■□□□□ 0.67
SPG7-201ENST00000268704 PSD3Q9NYI0 1048 aa19.21■□□□□ 0.67
SPG7-201ENST00000268704 ANAPC4Q9UJX5 808 aa19.21■□□□□ 0.67
SPG7-201ENST00000268704 GTPBP6O43824 516 aaPredicted RBP19.21■□□□□ 0.67
SPG7-201ENST00000268704 ATP1A1P05023 1023 aaKnown RBP19.21■□□□□ 0.67
SPG7-201ENST00000268704 TNNT3P45378 269 aaPredicted RBP19.21■□□□□ 0.67
SPG7-201ENST00000268704 IQCA1Q86XH1 822 aa19.21■□□□□ 0.67
SPG7-201ENST00000268704 HINFPQ9BQA5 517 aa19.21■□□□□ 0.67
SPG7-201ENST00000268704 BCL9O00512 1426 aa19.2■□□□□ 0.66
SPG7-201ENST00000268704 ERVV-1B6SEH8 477 aa19.2■□□□□ 0.66
SPG7-201ENST00000268704 EIF3JO75822 258 aaKnown RBP19.2■□□□□ 0.66
SPG7-201ENST00000268704 PIP4K2BP78356 416 aa19.2■□□□□ 0.66
SPG7-201ENST00000268704 ZNF658Q5TYW1 1059 aaPredicted RBP19.2■□□□□ 0.66
SPG7-201ENST00000268704 PLEKHA4Q9H4M7 779 aa19.2■□□□□ 0.66
SPG7-201ENST00000268704 TAF1P21675 1872 aa19.2■□□□□ 0.66
SPG7-201ENST00000268704 USP17L12C9JPN9 530 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms