RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 MDM2Q00987 491 aaPredicted RBP14.72□□□□□ -0.05
NUP54-201ENST00000264883 BIRC2Q13490 618 aa14.72□□□□□ -0.05
NUP54-201ENST00000264883 TTF1Q15361 905 aaPredicted RBP14.72□□□□□ -0.05
NUP54-201ENST00000264883 CCDC57Q2TAC2 916 aa14.72□□□□□ -0.05
NUP54-201ENST00000264883 YTHDF3Q7Z739 585 aaKnown RBP14.72□□□□□ -0.05
NUP54-201ENST00000264883 CENPHQ9H3R5 247 aa14.72□□□□□ -0.05
NUP54-201ENST00000264883 VCPKMTQ9H867 229 aa14.72□□□□□ -0.05
NUP54-201ENST00000264883 NID2Q14112 1375 aa14.72□□□□□ -0.05
NUP54-201ENST00000264883 GPAA1O43292 621 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 OPA1O60313 960 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 IBSPP21815 317 aaPredicted RBP14.71□□□□□ -0.05
NUP54-201ENST00000264883 ACTN3Q08043 901 aaPredicted RBP14.71□□□□□ -0.05
NUP54-201ENST00000264883 SF3B2Q13435 895 aaKnown RBP14.71□□□□□ -0.05
NUP54-201ENST00000264883 ZNF827Q17R98 1081 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 CCDC40Q4G0X9 1142 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 ZNF579Q8NAF0 562 aaKnown RBP14.71□□□□□ -0.05
NUP54-201ENST00000264883 ZNF512BQ96KM6 892 aaPredicted RBP14.71□□□□□ -0.05
NUP54-201ENST00000264883 RPGRIP1Q96KN7 1286 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 SLC4A9Q96Q91 983 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 MED15Q96RN5 788 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 TRIM6Q9C030 488 aaPredicted RBP14.71□□□□□ -0.05
NUP54-201ENST00000264883 HDAC6Q9UBN7 1215 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 ECM29Q5VYK3 1845 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 ECM2O94769 699 aaPredicted RBP14.71□□□□□ -0.05
NUP54-201ENST00000264883 FECHP22830 423 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 ERCC5P28715 1186 aaPredicted RBP14.71□□□□□ -0.05
NUP54-201ENST00000264883 PBX1P40424 430 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 IARSP41252 1262 aaKnown RBP14.71□□□□□ -0.05
NUP54-201ENST00000264883 SARNPP82979 210 aaKnown RBP14.71□□□□□ -0.05
NUP54-201ENST00000264883 PDCLQ13371 301 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 POSTNQ15063 836 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 SLC9C2Q5TAH2 1124 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 APOA5Q6Q788 366 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 SGMS1Q86VZ5 419 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 FAM184BQ9ULE4 1060 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 SAR1BQ9Y6B6 198 aa14.71□□□□□ -0.05
NUP54-201ENST00000264883 ENC1O14682 589 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 ZBTB43O43298 467 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 RASSF9O75901 435 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 CDR1P51861 262 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 ERVK-24P63145 666 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 CKAP4Q07065 602 aaKnown RBP14.7□□□□□ -0.06
NUP54-201ENST00000264883 PLCB4Q15147 1175 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 SAFBQ15424 915 aaKnown RBP eCLIP14.7□□□□□ -0.06
NUP54-201ENST00000264883 RNF187Q5TA31 235 aaPredicted RBP14.7□□□□□ -0.06
NUP54-201ENST00000264883 DNAJC10Q8IXB1 793 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 THSD7AQ9UPZ6 1657 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 GYPCP04921 128 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 SARSP49591 514 aaKnown RBP14.7□□□□□ -0.06
NUP54-201ENST00000264883 FXR1P51114 621 aaKnown RBP eCLIP14.7□□□□□ -0.06
NUP54-201ENST00000264883 PLCD1P51178 756 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 CLNS1AP54105 237 aaKnown RBP14.7□□□□□ -0.06
NUP54-201ENST00000264883 MORC3Q14149 939 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 FAM98CQ17RN3 349 aaKnown RBP14.7□□□□□ -0.06
NUP54-201ENST00000264883 APTXQ7Z2E3 356 aaKnown RBP14.7□□□□□ -0.06
NUP54-201ENST00000264883 AENQ8WTP8 325 aaKnown RBP14.7□□□□□ -0.06
NUP54-201ENST00000264883 CAPZA3Q96KX2 299 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 SLF1Q9BQI6 1058 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 GUCA1BQ9UMX6 200 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 CEP131Q9UPN4 1083 aa14.7□□□□□ -0.06
NUP54-201ENST00000264883 A0A1B0GUA9 196 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 PSMD14O00487 310 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 SRGAP2O75044 1071 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 LIFRP42702 1097 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 NAP1L1P55209 391 aaKnown RBP14.69□□□□□ -0.06
NUP54-201ENST00000264883 RILPL1Q5EBL4 403 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 CYP26C1Q6V0L0 522 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 SND1Q7KZF4 910 aaKnown RBP eCLIP14.69□□□□□ -0.06
NUP54-201ENST00000264883 CEP57Q86XR8 500 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 PAGR1Q9BTK6 254 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 PLA2G12BQ9BX93 195 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 PUS7LQ9H0K6 701 aaKnown RBP14.69□□□□□ -0.06
NUP54-201ENST00000264883 TBC1D2BQ9UPU7 963 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 MYH8P13535 1937 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 SSRP1Q08945 709 aaKnown RBP14.69□□□□□ -0.06
NUP54-201ENST00000264883 UBE3CQ15386 1083 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 SNCBQ16143 134 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 FILIP1LQ4L180 1135 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 GRIPAP1Q4V328 841 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 TTLL7Q6ZT98 887 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 NOSTRINQ8IVI9 506 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 CCDC13Q8IYE1 715 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 SLC40A1Q9NP59 571 aa14.69□□□□□ -0.06
NUP54-201ENST00000264883 ADD3Q9UEY8 706 aaKnown RBP14.69□□□□□ -0.06
NUP54-201ENST00000264883 DDX20Q9UHI6 824 aaKnown RBP14.69□□□□□ -0.06
NUP54-201ENST00000264883 TRPC5Q9UL62 973 aaPredicted RBP14.69□□□□□ -0.06
NUP54-201ENST00000264883 CICQ96RK0 1608 aaPredicted RBP14.69□□□□□ -0.06
NUP54-201ENST00000264883 GOLGA8AA7E2F4 631 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 ATP1A1P05023 1023 aaKnown RBP14.68□□□□□ -0.06
NUP54-201ENST00000264883 EPB41P11171 864 aaKnown RBP14.68□□□□□ -0.06
NUP54-201ENST00000264883 PTPREP23469 700 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 ADD2P35612 726 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 ALX1Q15699 326 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 NTRK3Q16288 839 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 ZNF594Q96JF6 807 aaPredicted RBP14.68□□□□□ -0.06
NUP54-201ENST00000264883 SEMA3EO15041 775 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 ZEB2O60315 1214 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 FMNL1O95466 1100 aaPredicted RBP14.68□□□□□ -0.06
NUP54-201ENST00000264883 ZAP70P43403 619 aa14.68□□□□□ -0.06
NUP54-201ENST00000264883 TRIM28Q13263 835 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms