RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 LACRTQ9GZZ8 138 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 GOLGA6CA6NDK9 693 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 GOLGA6DP0CG33 693 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 KRT2P35908 639 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 ARID5AQ03989 594 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 RASGRP2Q7LDG7 609 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 SPATA5Q8NB90 893 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 GOLGA6AQ9NYA3 693 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 ESYT3A0FGR9 886 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 PPP1R3GB7ZBB8 358 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 PATL2C9JE40 543 aaKnown RBP18.82■□□□□ 0.6
CTDP1-201ENST00000075430 ADAMTS3O15072 1205 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 IFIT1BQ5T764 474 aaKnown RBP18.82■□□□□ 0.6
CTDP1-201ENST00000075430 SH2D3CQ8N5H7 860 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 ZBTB38Q8NAP3 1195 aaPredicted RBP18.82■□□□□ 0.6
CTDP1-201ENST00000075430 ATG3Q9NT62 314 aa18.82■□□□□ 0.6
CTDP1-201ENST00000075430 MAGEC2Q9UBF1 373 aaPredicted RBP18.82■□□□□ 0.6
CTDP1-201ENST00000075430 POTEB2H3BUK9 544 aa18.81■□□□□ 0.6
CTDP1-201ENST00000075430 STAT6P42226 847 aa18.81■□□□□ 0.6
CTDP1-201ENST00000075430 FAM71BQ8TC56 605 aa18.81■□□□□ 0.6
CTDP1-201ENST00000075430 CTAGE1Q96RT6 745 aa18.81■□□□□ 0.6
CTDP1-201ENST00000075430 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
CTDP1-201ENST00000075430 SOS2Q07890 1332 aaPredicted RBP18.81■□□□□ 0.6
CTDP1-201ENST00000075430 PRCPP42785 496 aa18.81■□□□□ 0.6
CTDP1-201ENST00000075430 MTIF2P46199 727 aaKnown RBP18.81■□□□□ 0.6
CTDP1-201ENST00000075430 MAP9Q49MG5 647 aa18.81■□□□□ 0.6
CTDP1-201ENST00000075430 CCDC181Q5TID7 509 aa18.81■□□□□ 0.6
CTDP1-201ENST00000075430 NLRP10Q86W26 655 aa18.81■□□□□ 0.6
CTDP1-201ENST00000075430 KAT14Q9H8E8 782 aa18.81■□□□□ 0.6
CTDP1-201ENST00000075430 DYNLL1P63167 89 aaKnown RBP18.8■□□□□ 0.6
CTDP1-201ENST00000075430 CARD10Q9BWT7 1032 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 FAM207AQ9NSI2 230 aaPredicted RBP18.8■□□□□ 0.6
CTDP1-201ENST00000075430 TNS3Q68CZ2 1445 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 GSG1L2A8MUP6 293 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 PLEKP08567 350 aaPredicted RBP18.8■□□□□ 0.6
CTDP1-201ENST00000075430 ERCC5P28715 1186 aaPredicted RBP18.8■□□□□ 0.6
CTDP1-201ENST00000075430 SARSP49591 514 aaKnown RBP18.8■□□□□ 0.6
CTDP1-201ENST00000075430 RNF187Q5TA31 235 aaPredicted RBP18.8■□□□□ 0.6
CTDP1-201ENST00000075430 TYW1BQ6NUM6 668 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 FAM76AQ8TAV0 307 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 BRMS1Q9HCU9 246 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 GOLGA6BA6NDN3 693 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 NCK2O43639 380 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 PCCAP05165 728 aaPredicted RBP18.8■□□□□ 0.6
CTDP1-201ENST00000075430 SSBP05455 408 aaKnown RBP eCLIP18.8■□□□□ 0.6
CTDP1-201ENST00000075430 ARHGAP25P42331 645 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 PMS1P54277 932 aaKnown RBP18.8■□□□□ 0.6
CTDP1-201ENST00000075430 CTSWP56202 376 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 GNGT1P63211 74 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 CPVLQ9H3G5 476 aa18.8■□□□□ 0.6
CTDP1-201ENST00000075430 BUB1O43683 1085 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 ZNHIT6Q9NWK9 470 aaKnown RBP18.79■□□□□ 0.6
CTDP1-201ENST00000075430 CCDC196A0A1B0GTZ2 297 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 BACH1O14867 736 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 PDE8BO95263 885 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 ATP6V1AP38606 617 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 TBC1D8BQ0IIM8 1120 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 IQUBQ8NA54 791 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 SELENOOQ9BVL4 669 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 KRT23Q9C075 422 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 MLXIPQ9HAP2 919 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 RCCD1A6NED2 376 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 PDE2AO00408 941 aaPredicted RBP18.79■□□□□ 0.6
CTDP1-201ENST00000075430 MYO1BO43795 1136 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 PARP1P09874 1014 aaKnown RBP18.79■□□□□ 0.6
CTDP1-201ENST00000075430 GUCY2FP51841 1108 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 PDCLQ13371 301 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 WHAMMP3Q1A5X7 153 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 ICE2Q659A1 982 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 GIGYF2Q6Y7W6 1299 aaKnown RBP18.79■□□□□ 0.6
CTDP1-201ENST00000075430 OR8K1Q8NGG5 319 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 ISCA1Q9BUE6 129 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 TANGO6Q9C0B7 1094 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 RFX7Q2KHR2 1363 aa18.79■□□□□ 0.6
CTDP1-201ENST00000075430 MST1RQ04912 1400 aa18.78■□□□□ 0.6
CTDP1-201ENST00000075430 APTXQ7Z2E3 356 aaKnown RBP18.78■□□□□ 0.6
CTDP1-201ENST00000075430 MMRN2Q9H8L6 949 aa18.78■□□□□ 0.6
CTDP1-201ENST00000075430 CIAO1O76071 339 aa18.78■□□□□ 0.6
CTDP1-201ENST00000075430 VAT1LQ9HCJ6 419 aa18.78■□□□□ 0.6
CTDP1-201ENST00000075430 RIPOR2Q9Y4F9 1068 aa18.78■□□□□ 0.6
CTDP1-201ENST00000075430 TCP11X2Q5H9J9 407 aa18.78■□□□□ 0.6
CTDP1-201ENST00000075430 CATIPQ7Z7H3 387 aa18.78■□□□□ 0.6
CTDP1-201ENST00000075430 SHISA4Q96DD7 197 aa18.78■□□□□ 0.6
CTDP1-201ENST00000075430 FOXP1Q9H334 677 aaPredicted RBP18.78■□□□□ 0.6
CTDP1-201ENST00000075430 LRWD1Q9UFC0 647 aa18.78■□□□□ 0.6
CTDP1-201ENST00000075430 DMGDHQ9UI17 866 aaKnown RBP18.78■□□□□ 0.6
CTDP1-201ENST00000075430 NIP7Q9Y221 180 aaKnown RBP eCLIP18.78■□□□□ 0.6
CTDP1-201ENST00000075430 REXO2Q9Y3B8 237 aaKnown RBP18.78■□□□□ 0.6
CTDP1-201ENST00000075430 MAP3K15Q6ZN16 1313 aa18.77■□□□□ 0.6
CTDP1-201ENST00000075430 EBAG9O00559 213 aa18.77■□□□□ 0.6
CTDP1-201ENST00000075430 SYF2O95926 243 aaKnown RBP18.77■□□□□ 0.6
CTDP1-201ENST00000075430 TMC4Q7Z404 712 aa18.77■□□□□ 0.6
CTDP1-201ENST00000075430 XDHP47989 1333 aa18.77■□□□□ 0.6
CTDP1-201ENST00000075430 MAGEA9P43362 315 aa18.77■□□□□ 0.6
CTDP1-201ENST00000075430 GYG1P46976 350 aa18.77■□□□□ 0.6
CTDP1-201ENST00000075430 KANSL2Q9H9L4 492 aa18.77■□□□□ 0.6
CTDP1-201ENST00000075430 BCCIPQ9P287 314 aaKnown RBP eCLIP18.77■□□□□ 0.6
CTDP1-201ENST00000075430 NKRFO15226 690 aaKnown RBP eCLIP18.77■□□□□ 0.59
CTDP1-201ENST00000075430 HPDP32754 393 aaPredicted RBP18.77■□□□□ 0.59
CTDP1-201ENST00000075430 MSANTD4Q8NCY6 345 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms