RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 GabpaQ00422 454 aa18.11■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 B230104I21RikQ3USW4 141 aa18.11■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Pip5kl1Q6U7H8 395 aa18.11■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Plcg2Q8CIH5 1265 aa18.11■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Atp5c1Q91VR2 298 aaKnown RBP18.11■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 PdhbQ9D051 359 aa18.11■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Sil1Q9EPK6 465 aa18.11■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Tmem47Q9JJG6 181 aa18.11■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Fkbp1bQ9Z2I2 108 aa18.11■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Kiaa0100Q5SYL3 2234 aa18.11■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Rnf19bA2A7Q9 732 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Gm9857F7CXR1 130 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Prl7a2O54831 253 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Stx8O88983 236 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Hoxc6P10629 235 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 TbcaP48428 108 aaKnown RBP18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Fscn2Q32M02 492 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Kctd1Q5M956 257 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Tpd52Q62393 224 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 BcrQ6PAJ1 1270 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Cyp26b1Q811W2 512 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Smc5Q8CG46 1101 aaKnown RBP18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 MyripQ8K3I4 856 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Ero1aQ8R180 464 aa18.1■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Miga1Q4QQM5 600 aa18.09■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Ccdc85aQ5SP85 500 aa18.09■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Atp13a3Q5XF89 1219 aa18.09■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Zswim3Q8CFL8 695 aa18.09■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Dlk2Q8K1E3 382 aa18.09■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Pqbp1Q91VJ5 263 aaKnown RBP18.09■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 DaglbQ91WC9 669 aa18.09■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Mxra8Q9DBV4 442 aa18.09■□□□□ 0.49
Hmgb1-208ENSMUST00000139443 Wfdc16A2A5H4 111 aa18.08■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Myl3P09542 204 aa18.08■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Usp50Q6P8X6 390 aa18.08■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Pgrmc2Q80UU9 217 aaKnown RBP18.08■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Smc1bQ920F6 1248 aa18.08■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 4921524L21RikQ9D5T2 438 aa18.08■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Usp42B2RQC2 1324 aaKnown RBP18.07■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Btnl4A2CG29 586 aa18.07■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Prr16A3KMN5 304 aa18.07■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Nkx1-2P42580 305 aa18.07■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Myo19Q5SV80 963 aa18.07■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Vgll2Q8BGW8 322 aa18.07■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Taco1Q8K0Z7 294 aaKnown RBP18.07■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Lonrf3Q9D4H7 753 aa18.07■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Nek4Q9Z1J2 792 aa18.07■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Cyp3a59D3Z2W7 503 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 LtkP08923 888 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 OatP29758 439 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Ddit3P35639 168 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Nploc4P60670 608 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 NfiaQ02780 532 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 PhkbQ7TSH2 1085 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Spata7Q80VP2 582 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Iws1Q8C1D8 766 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Shisa4Q8CA71 197 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Pof1bQ8K4L4 587 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Tll2Q9WVM6 1012 aa18.06■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Gm42715A0A087WP63 3095 aaKnown RBP18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Pitpnm1O35954 1243 aa18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Pdia3P27773 505 aaKnown RBP18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Map4k1P70218 827 aa18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Stim2P83093 746 aa18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Cntnap5bQ0V8T8 1292 aa18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Samd11Q1RNF8 542 aa18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Slc44a1Q6X893 653 aa18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Taok2Q6ZQ29 1240 aa18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Zhx2Q8C0C0 836 aaKnown RBP18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Pcdhb22Q91XZ8 794 aa18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Odf2lQ9D478 642 aa18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 IkQ9Z1M8 557 aaKnown RBP18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Scn3aA2ASI5 1947 aa18.05■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Rbm8a2A0A0N4SUH6 174 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Dnajb6O54946 365 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Scg2Q03517 617 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Ifit2Q64112 472 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Tcp11l1Q8BTG3 509 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Kiaa1524Q8BWY9 907 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Rbm8aQ9CWZ3 174 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 CenppQ9CZ92 286 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Chmp5Q9D7S9 219 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Ak2Q9WTP6 239 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 PatjQ63ZW7 1834 aa18.04■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Lipo1J3QME6 396 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Dnajc2P54103 621 aaKnown RBP18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Kifap3P70188 793 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 HmgcrQ01237 887 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Vmn1r209Q5NC97 312 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 LrmpQ60664 539 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Usp17leQ7M764 540 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Ubxn10Q8BG34 277 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Ttc7aQ8BGB2 858 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Fsd2Q8BZ52 692 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Usp44Q8C2S0 711 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Pus7lQ8CE46 702 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Mad2l2Q9D752 211 aa18.03■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Kntc1Q8C3Y4 2207 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 Gm30191A0A0U1RNT7 187 aa18.02■□□□□ 0.48
Hmgb1-208ENSMUST00000139443 MycP01108 439 aa18.02■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 59.2 ms