RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 SfswapQ3USH5 945 aaKnown RBP14.54□□□□□ -0.08
Nup88-203ENSMUST00000108531 Lrrn2Q6PHP6 730 aa14.54□□□□□ -0.08
Nup88-203ENSMUST00000108531 Ccp110Q7TSH4 1004 aa14.54□□□□□ -0.08
Nup88-203ENSMUST00000108531 Epn1Q80VP1 575 aa14.54□□□□□ -0.08
Nup88-203ENSMUST00000108531 Setdb2Q8C267 713 aa14.54□□□□□ -0.08
Nup88-203ENSMUST00000108531 Ccdc38Q8CDN8 563 aa14.54□□□□□ -0.08
Nup88-203ENSMUST00000108531 Tmem60Q8K174 133 aa14.54□□□□□ -0.08
Nup88-203ENSMUST00000108531 Rai14Q9EP71 979 aaKnown RBP14.54□□□□□ -0.08
Nup88-203ENSMUST00000108531 RabggtaQ9JHK4 567 aa14.54□□□□□ -0.08
Nup88-203ENSMUST00000108531 Pnpla6Q3TRM4 1355 aa14.54□□□□□ -0.08
Nup88-203ENSMUST00000108531 Stx8O88983 236 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Nr5a1P33242 462 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Dnm2P39054 870 aaKnown RBP14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Chp1P61022 195 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Vsnl1P62761 191 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Cep131Q62036 1060 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Ctdp1Q7TSG2 960 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Krt222Q8CCX5 294 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Ccdc73Q8CDM4 1066 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Pspc1Q8R326 523 aaKnown RBP14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Washc1Q8VDD8 475 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Pla2g12bQ99P27 195 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Mis18aQ9CZJ6 204 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Tex13cD3YU32 604 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Ugt1a8D3Z748 530 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Ugt1a10E9PXN7 530 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Nap1l2P51860 460 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Ano9P86044 747 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Atp8b1Q148W0 1251 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 ItgadQ3V0T4 1168 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 MmeQ61391 750 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Ankrd23Q812A3 306 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Spata4Q8K3V1 295 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Klhl10Q9D5V2 608 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Ubxn8Q9QZ49 277 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Mast2Q60592 1734 aa14.53□□□□□ -0.08
Nup88-203ENSMUST00000108531 Herc3A6H6S0 1050 aa14.52□□□□□ -0.08
Nup88-203ENSMUST00000108531 Ildr1Q8CBR1 537 aa14.52□□□□□ -0.08
Nup88-203ENSMUST00000108531 Q91WD4 421 aa14.52□□□□□ -0.08
Nup88-203ENSMUST00000108531 Apopt1Q9CQW7 192 aa14.52□□□□□ -0.08
Nup88-203ENSMUST00000108531 Mss51Q9D5Z5 446 aa14.52□□□□□ -0.08
Nup88-203ENSMUST00000108531 Eif2ak3Q9Z2B5 1114 aa14.52□□□□□ -0.08
Nup88-203ENSMUST00000108531 Sema3fO88632 785 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Rfc1P35601 1131 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Rasa2P58069 847 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tubb5P99024 444 aaKnown RBP14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Slc9a1Q61165 820 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Cnnm4Q69ZF7 771 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Usp50Q6P8X6 390 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 MtrrQ8C1A3 696 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Tmem63cQ8CBX0 802 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Sash3Q8K352 380 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Nup133Q8R0G9 1155 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Stap2Q8R0L1 411 aa14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Sf3b3Q921M3 1217 aaKnown RBP14.52□□□□□ -0.09
Nup88-203ENSMUST00000108531 Peak1Q69Z38 1735 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Stox1B2RQL2 990 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 ByslO54825 436 aaKnown RBP14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Npy5rO70342 466 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Kcnb1Q03717 857 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 LrmpQ60664 539 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Pabpc4Q6PHQ9 660 aaKnown RBP14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Dnph1Q80VJ3 173 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 DlatQ8BMF4 642 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ccdc122Q8BVN0 290 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ccdc14Q8K2J4 934 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Klc3Q91W40 508 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Dnajc7Q9QYI3 494 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Lgr5Q9Z1P4 907 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Pcdh11xF6ZNL5 1338 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Adgra3Q7TT36 1310 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gm4307E9PZY4 289 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gm4312K9J7E2 289 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 CltaO08585 235 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ftl1P29391 183 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Pth1rP41593 591 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gimap8Q75N62 688 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Txndc16Q7TN22 820 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Ccdc93Q7TQK5 629 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Nek5Q7TSC3 627 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Lrrc1Q80VQ1 524 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Phc3Q8CHP6 981 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 1700018B08RikQ9DA83 213 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 AllcQ9JHX6 414 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Cbx8Q9QXV1 362 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gja10Q9WUS4 505 aa14.51□□□□□ -0.09
Nup88-203ENSMUST00000108531 NesQ6P5H2 1864 aaKnown RBP14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Krt78E9Q0F0 1068 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Psmd14O35593 310 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Stim1P70302 685 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 McamQ8R2Y2 648 aaKnown RBP14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 AdarQ99MU3 1178 aaKnown RBP14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Letm1Q9Z2I0 738 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Arfgef1G3X9K3 1846 aaKnown RBP14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 PfasQ5SUR0 1337 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gm36210A0A1B0GS00 229 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Zfp853A0A1D5RM95 733 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gm28042B7ZCM9 1014 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gm5934D3Z4U6 212 aa14.5□□□□□ -0.09
Nup88-203ENSMUST00000108531 Gm10378F6XQQ1 160 aa14.5□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms