RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeastyeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD5YOR329C SSQ1Q05931 657 aaPredicted RBP2.36□□□□□ -2.03
SCD5YOR329C MCP2Q06567 569 aa2.36□□□□□ -2.03
SCD5YOR329C GRS2Q06817 618 aa2.36□□□□□ -2.03
SCD5YOR329C SYT1Q06836 1226 aa2.36□□□□□ -2.03
SCD5YOR329C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SCD5YOR329C TAF3Q12297 353 aa2.36□□□□□ -2.03
SCD5YOR329C AFI1Q99222 893 aa2.36□□□□□ -2.03
SCD5YOR329C CAN1P04817 590 aa2.35□□□□□ -2.03
SCD5YOR329C SCH9P11792 824 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C KEX2P13134 814 aa2.35□□□□□ -2.03
SCD5YOR329C GID7P25569 745 aa2.35□□□□□ -2.03
SCD5YOR329C YCR090CP25654 182 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C DAL1P32375 460 aa2.35□□□□□ -2.03
SCD5YOR329C COX13P32799 129 aa2.35□□□□□ -2.03
SCD5YOR329C MRS6P32864 603 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C IMP3P32899 183 aaPredicted RBP2.35□□□□□ -2.03
SCD5YOR329C YKL151CP36059 337 aa2.35□□□□□ -2.03
SCD5YOR329C KTR4P38131 464 aa2.35□□□□□ -2.03
SCD5YOR329C RFS1P38234 210 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C CCT6P39079 546 aa2.35□□□□□ -2.03
SCD5YOR329C PEP8P40335 379 aa2.35□□□□□ -2.03
SCD5YOR329C YIL161WP40449 235 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C MOB1P40484 314 aa2.35□□□□□ -2.03
SCD5YOR329C AXL1P40851 1208 aa2.35□□□□□ -2.03
SCD5YOR329C DIM1P41819 318 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C FLC3P53121 802 aa2.35□□□□□ -2.03
SCD5YOR329C MRM2P53123 320 aa2.35□□□□□ -2.03
SCD5YOR329C NMA2P53204 395 aa2.35□□□□□ -2.03
SCD5YOR329C TEP1P53916 434 aa2.35□□□□□ -2.03
SCD5YOR329C DOS2P54858 310 aa2.35□□□□□ -2.03
SCD5YOR329C ELP3Q02908 557 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C YMR102CQ03177 834 aa2.35□□□□□ -2.03
SCD5YOR329C CLU1Q03690 1277 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C PPN1Q04119 674 aa2.35□□□□□ -2.03
SCD5YOR329C ARA2Q04212 335 aa2.35□□□□□ -2.03
SCD5YOR329C YSH1Q06224 779 aaPredicted RBP2.35□□□□□ -2.03
SCD5YOR329C SEC10Q06245 871 aa2.35□□□□□ -2.03
SCD5YOR329C SWC7Q06707 132 aa2.35□□□□□ -2.03
SCD5YOR329C HBT1Q07653 1046 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C YDL176WQ12027 708 aa2.35□□□□□ -2.03
SCD5YOR329C CBP2P03874 630 aaPredicted RBP2.35□□□□□ -2.03
SCD5YOR329C STE6P12866 1290 aa2.35□□□□□ -2.03
SCD5YOR329C APE1P14904 514 aa2.35□□□□□ -2.03
SCD5YOR329C APA1P16550 321 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C PWP1P21304 576 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C MRPL8P22353 238 aa2.35□□□□□ -2.03
SCD5YOR329C CAD1P24813 409 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C ERG6P25087 383 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C AAD3P25612 363 aa2.35□□□□□ -2.03
SCD5YOR329C CDC20P26309 610 aa2.35□□□□□ -2.03
SCD5YOR329C COQ8P27697 501 aa2.35□□□□□ -2.03
SCD5YOR329C GUT2P32191 649 aa2.35□□□□□ -2.03
SCD5YOR329C MVD1P32377 396 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C PDB1P32473 366 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C SSE1P32589 693 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C SWE1P32944 819 aa2.35□□□□□ -2.03
SCD5YOR329C FRE2P36033 711 aa2.35□□□□□ -2.03
SCD5YOR329C CUE2P36075 443 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C GIP1P38229 639 aa2.35□□□□□ -2.03
SCD5YOR329C NEM1P38757 446 aa2.35□□□□□ -2.03
SCD5YOR329C YJL206CP39529 758 aa2.35□□□□□ -2.03
SCD5YOR329C SEO1P39709 593 aa2.35□□□□□ -2.03
SCD5YOR329C ALG5P40350 334 aa2.35□□□□□ -2.03
SCD5YOR329C MET18P40469 1032 aa2.35□□□□□ -2.03
SCD5YOR329C INP51P40559 946 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C TMA22P47089 198 aaPredicted RBP2.35□□□□□ -2.03
SCD5YOR329C TAN1P53072 289 aaPredicted RBP2.35□□□□□ -2.03
SCD5YOR329C NNF2P53253 936 aa2.35□□□□□ -2.03
SCD5YOR329C SHY1P53266 389 aa2.35□□□□□ -2.03
SCD5YOR329C YGR250CP53316 781 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C NOP19P53317 196 aaPredicted RBP2.35□□□□□ -2.03
SCD5YOR329C HST2P53686 357 aa2.35□□□□□ -2.03
SCD5YOR329C YNL143CP53908 130 aa2.35□□□□□ -2.03
SCD5YOR329C IMP4P53941 290 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C IRC15Q02733 499 aa2.35□□□□□ -2.03
SCD5YOR329C EMI2Q04409 500 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C HFD1Q04458 532 aa2.35□□□□□ -2.03
SCD5YOR329C BCH1Q05029 724 aa2.35□□□□□ -2.03
SCD5YOR329C ARP9Q05123 467 aa2.35□□□□□ -2.03
SCD5YOR329C MCH5Q08777 521 aa2.35□□□□□ -2.03
SCD5YOR329C GNT1Q12096 491 aa2.35□□□□□ -2.03
SCD5YOR329C LPX1Q12405 387 aaKnown RBP2.35□□□□□ -2.03
SCD5YOR329C HSH49Q99181 213 aaPredicted RBP2.35□□□□□ -2.03
SCD5YOR329C MPD2Q99316 277 aa2.35□□□□□ -2.03
SCD5YOR329C CAR1P00812 333 aaKnown RBP2.34□□□□□ -2.03
SCD5YOR329C RHO2P06781 192 aa2.34□□□□□ -2.03
SCD5YOR329C SST2P11972 698 aaKnown RBP2.34□□□□□ -2.03
SCD5YOR329C ACO1P19414 778 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SCD5YOR329C PRP6P19735 899 aaPredicted RBP2.34□□□□□ -2.03
SCD5YOR329C SEC15P22224 910 aa2.34□□□□□ -2.03
SCD5YOR329C SIN4P32259 974 aa2.34□□□□□ -2.03
SCD5YOR329C AEP1P32493 518 aa2.34□□□□□ -2.03
SCD5YOR329C CYM1P32898 989 aa2.34□□□□□ -2.03
SCD5YOR329C RPS1AP33442 255 aaKnown RBP2.34□□□□□ -2.03
SCD5YOR329C STE13P33894 931 aa2.34□□□□□ -2.03
SCD5YOR329C PXA2P34230 853 aa2.34□□□□□ -2.03
SCD5YOR329C TFA2P36145 328 aa2.34□□□□□ -2.03
SCD5YOR329C GDT1P38301 280 aaPredicted RBP2.34□□□□□ -2.03
SCD5YOR329C RFC3P38629 340 aa2.34□□□□□ -2.03
SCD5YOR329C ARP1P38696 384 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms