RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C YML108WQ03759 105 aa3.59□□□□□ -1.83
SSM4YIL030C PML39Q03760 334 aa3.59□□□□□ -1.83
SSM4YIL030C TAF11Q04226 346 aa3.59□□□□□ -1.83
SSM4YIL030C YMR321CQ04898 105 aa3.59□□□□□ -1.83
SSM4YIL030C LAM6Q08001 693 aa3.59□□□□□ -1.83
SSM4YIL030C NRT1Q08485 598 aa3.59□□□□□ -1.83
SSM4YIL030C YPL216WQ08964 1102 aa3.59□□□□□ -1.83
SSM4YIL030C ENV7Q12003 364 aa3.59□□□□□ -1.83
SSM4YIL030C GPM2Q12008 311 aa3.59□□□□□ -1.83
SSM4YIL030C WTM1Q12363 437 aaKnown RBP3.59□□□□□ -1.83
SSM4YIL030C SPT2P06843 333 aaPredicted RBP3.59□□□□□ -1.83
SSM4YIL030C HSP26P15992 214 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SSM4YIL030C UBA1P22515 1024 aaKnown RBP3.59□□□□□ -1.83
SSM4YIL030C CLB2P24869 491 aa3.59□□□□□ -1.83
SSM4YIL030C CHA1P25379 360 aaKnown RBP3.59□□□□□ -1.83
SSM4YIL030C RPS7AP26786 190 aaKnown RBP3.59□□□□□ -1.83
SSM4YIL030C TOD6P34219 525 aa3.59□□□□□ -1.83
SSM4YIL030C TVP38P36164 337 aa3.59□□□□□ -1.83
SSM4YIL030C PDS1P40316 373 aaPredicted RBP3.59□□□□□ -1.83
SSM4YIL030C SPR3P41901 512 aa3.59□□□□□ -1.83
SSM4YIL030C AGX1P43567 385 aa3.59□□□□□ -1.83
SSM4YIL030C JJJ3P47138 172 aa3.59□□□□□ -1.83
SSM4YIL030C UTP8P53276 713 aaKnown RBP3.59□□□□□ -1.83
SSM4YIL030C DYN3Q04949 312 aa3.59□□□□□ -1.83
SSM4YIL030C VPS36Q06696 566 aa3.59□□□□□ -1.83
SSM4YIL030C MED2Q12124 431 aa3.59□□□□□ -1.83
SSM4YIL030C YPR1Q12458 312 aa3.59□□□□□ -1.83
SSM4YIL030C YGR161W-CQ3E744 92 aa3.59□□□□□ -1.83
SSM4YIL030C MSB2P32334 1306 aa3.59□□□□□ -1.84
SSM4YIL030C CAR1P00812 333 aaKnown RBP3.59□□□□□ -1.84
SSM4YIL030C HOM2P13663 365 aaKnown RBP3.59□□□□□ -1.84
SSM4YIL030C NPP1P25353 742 aa3.59□□□□□ -1.84
SSM4YIL030C NGG1P32494 702 aa3.59□□□□□ -1.84
SSM4YIL030C RPS1AP33442 255 aaKnown RBP3.59□□□□□ -1.84
SSM4YIL030C KSP1P38691 1029 aaKnown RBP3.59□□□□□ -1.84
SSM4YIL030C RRN7P40992 514 aa3.59□□□□□ -1.84
SSM4YIL030C YGR210CP42942 411 aa3.59□□□□□ -1.84
SSM4YIL030C PTR3P43606 678 aa3.59□□□□□ -1.84
SSM4YIL030C EXG2P52911 562 aa3.59□□□□□ -1.84
SSM4YIL030C DAM1P53267 343 aa3.59□□□□□ -1.84
SSM4YIL030C APP1P53933 587 aa3.59□□□□□ -1.84
SSM4YIL030C MPS1P54199 764 aa3.59□□□□□ -1.84
SSM4YIL030C YPL107WQ02873 248 aa3.59□□□□□ -1.84
SSM4YIL030C BUD7Q08754 746 aa3.59□□□□□ -1.84
SSM4YIL030C YOR289WQ12012 251 aaPredicted RBP3.59□□□□□ -1.84
SSM4YIL030C HPR1P17629 752 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C ATP7P30902 174 aa3.58□□□□□ -1.84
SSM4YIL030C ZRT3P34240 503 aa3.58□□□□□ -1.84
SSM4YIL030C STB6P36085 766 aa3.58□□□□□ -1.84
SSM4YIL030C YKR023WP36119 530 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C SLM4P38247 162 aa3.58□□□□□ -1.84
SSM4YIL030C YEN1P40028 759 aa3.58□□□□□ -1.84
SSM4YIL030C YER156CP40093 338 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C NUP85P46673 744 aa3.58□□□□□ -1.84
SSM4YIL030C YGL036WP53185 909 aaPredicted RBP3.58□□□□□ -1.84
SSM4YIL030C NAM8Q00539 523 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C AIM39Q08223 395 aa3.58□□□□□ -1.84
SSM4YIL030C RSA1Q08932 381 aa3.58□□□□□ -1.84
SSM4YIL030C DED1P06634 604 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C SUI3P09064 285 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C PUT1P09368 476 aa3.58□□□□□ -1.84
SSM4YIL030C RDS2P19541 446 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C ACE2P21192 770 aa3.58□□□□□ -1.84
SSM4YIL030C HRR25P29295 494 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C TPO5P36029 618 aa3.58□□□□□ -1.84
SSM4YIL030C CCL1P37366 393 aa3.58□□□□□ -1.84
SSM4YIL030C EXO84P38261 753 aa3.58□□□□□ -1.84
SSM4YIL030C YBR225WP38321 900 aa3.58□□□□□ -1.84
SSM4YIL030C HSE1P38753 452 aa3.58□□□□□ -1.84
SSM4YIL030C CKB2P38930 258 aa3.58□□□□□ -1.84
SSM4YIL030C STN1P38960 494 aa3.58□□□□□ -1.84
SSM4YIL030C YER137CP40083 148 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C AAD10P47182 288 aa3.58□□□□□ -1.84
SSM4YIL030C SPC105P53148 917 aa3.58□□□□□ -1.84
SSM4YIL030C YNL010WP53981 241 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C SMA1Q02651 245 aa3.58□□□□□ -1.84
SSM4YIL030C ECM11Q04110 302 aa3.58□□□□□ -1.84
SSM4YIL030C ATG26Q06321 1198 aa3.58□□□□□ -1.84
SSM4YIL030C MCA1Q08601 432 aa3.58□□□□□ -1.84
SSM4YIL030C SAM4Q08985 325 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C YHR213W-AQ8TGT4 77 aa3.58□□□□□ -1.84
SSM4YIL030C ILV1P00927 576 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C RPL24AP04449 155 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C CMD1P06787 147 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C MAS1P10507 462 aa3.58□□□□□ -1.84
SSM4YIL030C GAL3P13045 520 aa3.58□□□□□ -1.84
SSM4YIL030C CYM1P32898 989 aa3.58□□□□□ -1.84
SSM4YIL030C SCD5P34758 872 aa3.58□□□□□ -1.84
SSM4YIL030C YBR137WP38276 179 aa3.58□□□□□ -1.84
SSM4YIL030C GND1P38720 489 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C RRP4P38792 359 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C CYC2P38909 366 aa3.58□□□□□ -1.84
SSM4YIL030C PIK1P39104 1066 aa3.58□□□□□ -1.84
SSM4YIL030C ULP2P40537 1034 aaPredicted RBP3.58□□□□□ -1.84
SSM4YIL030C ELP2P42935 788 aa3.58□□□□□ -1.84
SSM4YIL030C RPN11P43588 306 aaKnown RBP3.58□□□□□ -1.84
SSM4YIL030C ULI1P43604 169 aa3.58□□□□□ -1.84
SSM4YIL030C RRT5P43607 289 aa3.58□□□□□ -1.84
SSM4YIL030C ATH1P48016 1211 aa3.58□□□□□ -1.84
SSM4YIL030C HHO1P53551 258 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms