RNA–Protein interactions for RNA: YDR201W

SPC19, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC19, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC19	YDR201W	RLI1	Q03195	608 aa	Known RBP	4.09	□□□□□ -1.75
SPC19	YDR201W	INP2	Q03824	705 aa		4.09	□□□□□ -1.75
SPC19	YDR201W	NHX1	Q04121	633 aa		4.09	□□□□□ -1.75
SPC19	YDR201W	RSC2	Q06488	889 aa		4.09	□□□□□ -1.75
SPC19	YDR201W	SWC7	Q06707	132 aa		4.09	□□□□□ -1.75
SPC19	YDR201W	SLD7	Q08457	257 aa		4.09	□□□□□ -1.75
SPC19	YDR201W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
SPC19	YDR201W	NOT5	Q12514	560 aa	Predicted RBP	4.09	□□□□□ -1.75
SPC19	YDR201W	RGS2	Q99188	309 aa		4.09	□□□□□ -1.75
SPC19	YDR201W	AFI1	Q99222	893 aa		4.09	□□□□□ -1.75
SPC19	YDR201W	ENO2	P00925	437 aa	Known RBP	4.08	□□□□□ -1.76
SPC19	YDR201W	ARD1	P07347	238 aa	Predicted RBP	4.08	□□□□□ -1.76
SPC19	YDR201W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SPC19	YDR201W	PWP1	P21304	576 aa	Known RBP	4.08	□□□□□ -1.76
SPC19	YDR201W	ATP12	P22135	325 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	PDE1	P22434	369 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	AMD2	P22580	549 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	VAN1	P23642	535 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	MSH2	P25847	964 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	RAD27	P26793	382 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	RAD16	P31244	790 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	SRP101	P32916	621 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	RDH54	P38086	958 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	YHI9	P38765	294 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	YDR089W	P38966	869 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	MEF2	P39677	819 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	VAC8	P39968	578 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	MGS1	P40151	587 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	ELO3	P40319	345 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	HOS4	P40480	1083 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	YIR016W	P40572	265 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	UFE1	P41834	346 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	YFL040W	P43562	540 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	UBP6	P43593	499 aa	Known RBP	4.08	□□□□□ -1.76
SPC19	YDR201W	ARC1	P46672	376 aa	Known RBP	4.08	□□□□□ -1.76
SPC19	YDR201W	DLD2	P46681	530 aa	Known RBP	4.08	□□□□□ -1.76
SPC19	YDR201W	MRM2	P53123	320 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	UTP8	P53276	713 aa	Known RBP	4.08	□□□□□ -1.76
SPC19	YDR201W	GND2	P53319	492 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	BUD32	P53323	261 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	TRM112	P53738	135 aa	Predicted RBP	4.08	□□□□□ -1.76
SPC19	YDR201W	IST1	P53843	298 aa	Predicted RBP	4.08	□□□□□ -1.76
SPC19	YDR201W	YNL058C	P53947	316 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	PNG1	Q02890	363 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	RNY1	Q02933	434 aa	Known RBP	4.08	□□□□□ -1.76
SPC19	YDR201W	TRS31	Q03337	283 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	TVP15	Q03860	143 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	GTB1	Q04924	702 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	YLR177W	Q06251	628 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	LCB4	Q12246	624 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	OCA6	Q12454	224 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	YMR030W-A	Q3E760	96 aa		4.08	□□□□□ -1.76
SPC19	YDR201W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SPC19	YDR201W	EXO70	P19658	623 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	NPP1	P25353	742 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SPC19	YDR201W	BEM3	P32873	1128 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	ADD66	P36040	267 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	TGL4	P36165	910 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	RIM2	P38127	377 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	MRP21	P38175	177 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	FZO1	P38297	855 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	YHL041W	P38730	149 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	NUP60	P39705	539 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	JHD1	P40034	492 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	BTT1	P40314	149 aa	Predicted RBP	4.07	□□□□□ -1.76
SPC19	YDR201W	SEC28	P40509	296 aa	Known RBP	4.07	□□□□□ -1.76
SPC19	YDR201W	BST1	P43571	1029 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	MAD3	P47074	515 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	BFA1	P47113	574 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	ILM1	P47155	203 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	MRX6	P48564	524 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	ASN2	P49090	572 aa	Known RBP	4.07	□□□□□ -1.76
SPC19	YDR201W	PRP24	P49960	444 aa	Known RBP	4.07	□□□□□ -1.76
SPC19	YDR201W	TEL2	P53038	688 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	YNL165W	P53891	406 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	EFM6	P53970	246 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	CDC14	Q00684	551 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	LGE1	Q02796	332 aa	Known RBP	4.07	□□□□□ -1.76
SPC19	YDR201W	FMN1	Q03778	218 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	RPN9	Q04062	393 aa	Known RBP	4.07	□□□□□ -1.76
SPC19	YDR201W	LDB18	Q07887	179 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	OSW1	Q08692	278 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	PGC1	Q08959	321 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	GNT1	Q12096	491 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	APC9	Q12107	265 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	CHS5	Q12114	671 aa	Known RBP	4.07	□□□□□ -1.76
SPC19	YDR201W	MNL2	Q12205	849 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	NDJ1	Q12366	352 aa		4.07	□□□□□ -1.76
SPC19	YDR201W	LPX1	Q12405	387 aa	Known RBP	4.07	□□□□□ -1.76
SPC19	YDR201W	YPR089W	O13585	888 aa		4.06	□□□□□ -1.76
SPC19	YDR201W	MIS1	P09440	975 aa	Known RBP	4.06	□□□□□ -1.76
SPC19	YDR201W	SAC7	P17121	654 aa		4.06	□□□□□ -1.76
SPC19	YDR201W	CLN1	P20437	546 aa		4.06	□□□□□ -1.76
SPC19	YDR201W	REC107	P21651	314 aa		4.06	□□□□□ -1.76
SPC19	YDR201W	BEM1	P29366	551 aa		4.06	□□□□□ -1.76
SPC19	YDR201W	MLS1	P30952	554 aa		4.06	□□□□□ -1.76
SPC19	YDR201W	SGE1	P33335	543 aa		4.06	□□□□□ -1.76
SPC19	YDR201W	WHI3	P34761	661 aa	Known RBP	4.06	□□□□□ -1.76
SPC19	YDR201W	ASK1	P35734	292 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms