RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	MGR3	Q04472	501 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	VBA4	Q04602	768 aa	Known RBP	5.25	□□□□□ -1.57
ECM1	YAL059W	GTB1	Q04924	702 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	TRI1	Q05024	226 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	MCP2	Q06567	569 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	VPS36	Q06696	566 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	AAD4	Q07747	329 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	ENT4	Q07872	247 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	RTC5	Q12108	567 aa	Known RBP	5.25	□□□□□ -1.57
ECM1	YAL059W	NMD4	Q12129	218 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	PSY3	Q12318	242 aa		5.25	□□□□□ -1.57
ECM1	YAL059W	CTT1	P06115	562 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	ERG20	P08524	352 aa	Known RBP	5.24	□□□□□ -1.57
ECM1	YAL059W	STE12	P13574	688 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	KAR3	P17119	729 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	YCK1	P23291	538 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	PHO84	P25297	587 aa	Known RBP	5.24	□□□□□ -1.57
ECM1	YAL059W	ARP2	P32381	391 aa	Known RBP	5.24	□□□□□ -1.57
ECM1	YAL059W	MRP20	P32387	263 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	MF(ALPHA)2	P32435	120 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	YEL043W	P32618	956 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	PHO11	P35842	467 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	CCL1	P37366	393 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	PCH2	P38126	564 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	SRO77	P38163	1010 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	CBR1	P38626	284 aa	Known RBP	5.24	□□□□□ -1.57
ECM1	YAL059W	PHO12	P38693	467 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	SMF1	P38925	575 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	PFK26	P40433	827 aa	Known RBP	5.24	□□□□□ -1.57
ECM1	YAL059W	CAB2	P40506	365 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	YNR071C	P53757	342 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	NGL3	Q03210	505 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	DBP9	Q06218	594 aa	Known RBP	5.24	□□□□□ -1.57
ECM1	YAL059W	LUC7	Q07508	261 aa	Predicted RBP	5.24	□□□□□ -1.57
ECM1	YAL059W	FMP45	Q07651	309 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	RIX7	Q07844	837 aa	Known RBP	5.24	□□□□□ -1.57
ECM1	YAL059W	CLP1	Q08685	445 aa	Predicted RBP	5.24	□□□□□ -1.57
ECM1	YAL059W	YRM1	Q12340	786 aa		5.24	□□□□□ -1.57
ECM1	YAL059W	RRP43	P25359	394 aa	Predicted RBP	5.23	□□□□□ -1.57
ECM1	YAL059W	YCR051W	P25631	222 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	CAP1	P28495	268 aa	Known RBP	5.23	□□□□□ -1.57
ECM1	YAL059W	NTG1	P31378	399 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	PET127	P32606	800 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	FRD1	P32614	470 aa	Known RBP	5.23	□□□□□ -1.57
ECM1	YAL059W	DAD2	P36162	133 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	YHR054C	P38780	354 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	CTM1	P38818	585 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	MET18	P40469	1032 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	FET5	P43561	622 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	BST1	P43571	1029 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	EPL1	P43572	832 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	BPL1	P48445	690 aa	Predicted RBP	5.23	□□□□□ -1.57
ECM1	YAL059W	FHN1	P53279	174 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	ARP5	P53946	755 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	ACS1	Q01574	713 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	RAD30	Q04049	632 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	DIA2	Q08496	732 aa	Predicted RBP	5.23	□□□□□ -1.57
ECM1	YAL059W	RIM20	Q12033	661 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	HOS1	Q12214	470 aa		5.23	□□□□□ -1.57
ECM1	YAL059W	RUD3	Q12234	484 aa	Known RBP	5.23	□□□□□ -1.57
ECM1	YAL059W	FRS1	P15624	595 aa	Known RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	URA7	P28274	579 aa	Known RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	PAP1	P29468	568 aa	Known RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	UBP11	P36026	717 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	REG2	P38232	338 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	MUP3	P38734	546 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	IST3	P40565	148 aa	Predicted RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	STU2	P46675	888 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	COG1	P53079	417 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	DAK1	P54838	584 aa	Known RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	PRO2	P54885	456 aa	Known RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	SMX3	P54999	86 aa	Predicted RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	TOF2	Q02208	771 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	RCR2	Q03446	210 aa	Known RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	RBA50	Q04418	439 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	RCO1	Q04779	684 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	ATG38	Q05789	226 aa	Known RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	YPS7	Q06325	596 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	CRD1	Q07560	283 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	PML1	Q07930	204 aa	Predicted RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	HER1	Q12276	1246 aa		5.22	□□□□□ -1.57
ECM1	YAL059W	PFK27	Q12471	397 aa	Predicted RBP	5.22	□□□□□ -1.57
ECM1	YAL059W	CPR2	P23285	205 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	MRPL25	P23369	157 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	BCS1	P32839	456 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	COY1	P34237	679 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	HEL1	P36113	551 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	YHR033W	P38690	423 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	YEL057C	P39983	233 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	FMP10	P40098	244 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	SEC9	P40357	651 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	TCB2	P48231	1178 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	SHE4	P51534	789 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	RPN14	P53196	417 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	MAK10	Q02197	733 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	ATG21	Q02887	496 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	EFR3	Q03653	782 aa	Known RBP	5.21	□□□□□ -1.58
ECM1	YAL059W	DON1	Q05610	365 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	MMR1	Q06324	491 aa		5.21	□□□□□ -1.58
ECM1	YAL059W	IRC10	Q08118	586 aa		5.21	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 78 ms