RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.18■□□□□ 0.82
PHGDH-234ENST00000642041 ABCF2Q9UG63 623 aa20.18■□□□□ 0.82
PHGDH-234ENST00000642041 SMC3Q9UQE7 1217 aa20.18■□□□□ 0.82
PHGDH-234ENST00000642041 E7EWF7 191 aa20.17■□□□□ 0.82
PHGDH-234ENST00000642041 CYP2C8P10632 490 aa20.17■□□□□ 0.82
PHGDH-234ENST00000642041 INPP5BP32019 993 aa20.17■□□□□ 0.82
PHGDH-234ENST00000642041 CACNB3P54284 484 aa20.17■□□□□ 0.82
PHGDH-234ENST00000642041 GPAT2Q6NUI2 795 aa20.17■□□□□ 0.82
PHGDH-234ENST00000642041 TMTC2Q8N394 836 aa20.17■□□□□ 0.82
PHGDH-234ENST00000642041 MUC3AQ02505 3323 aa20.17■□□□□ 0.82
PHGDH-234ENST00000642041 SLC3A2P08195 630 aaKnown RBP20.16■□□□□ 0.82
PHGDH-234ENST00000642041 PLCG2P16885 1265 aa20.16■□□□□ 0.82
PHGDH-234ENST00000642041 EVCP57679 992 aa20.16■□□□□ 0.82
PHGDH-234ENST00000642041 HDLBPQ00341 1268 aaKnown RBP20.16■□□□□ 0.82
PHGDH-234ENST00000642041 EXOSC10Q01780 885 aaKnown RBP20.16■□□□□ 0.82
PHGDH-234ENST00000642041 FKBP1CQ5VVH2 108 aa20.16■□□□□ 0.82
PHGDH-234ENST00000642041 SPRYD3Q8NCJ5 442 aa20.16■□□□□ 0.82
PHGDH-234ENST00000642041 TMEM87BQ96K49 555 aa20.16■□□□□ 0.82
PHGDH-234ENST00000642041 ATP8A2Q9NTI2 1148 aa20.16■□□□□ 0.82
PHGDH-234ENST00000642041 DOCK3Q8IZD9 2030 aa20.15■□□□□ 0.82
PHGDH-234ENST00000642041 TNPO2O14787 897 aaKnown RBP20.15■□□□□ 0.82
PHGDH-234ENST00000642041 AMOTL1Q8IY63 956 aa20.15■□□□□ 0.82
PHGDH-234ENST00000642041 IFNL3Q8IZI9 196 aa20.15■□□□□ 0.82
PHGDH-234ENST00000642041 CRNKL1Q9BZJ0 848 aaKnown RBP20.15■□□□□ 0.82
PHGDH-234ENST00000642041 TMOD2Q9NZR1 351 aa20.15■□□□□ 0.82
PHGDH-234ENST00000642041 ZNF112Q9UJU3 913 aa20.15■□□□□ 0.82
PHGDH-234ENST00000642041 CXCL11O14625 94 aa20.14■□□□□ 0.81
PHGDH-234ENST00000642041 MBD4O95243 580 aa20.14■□□□□ 0.81
PHGDH-234ENST00000642041 LDHBP07195 334 aaKnown RBP20.14■□□□□ 0.81
PHGDH-234ENST00000642041 HMGN5P82970 282 aaKnown RBP20.14■□□□□ 0.81
PHGDH-234ENST00000642041 SART3Q15020 963 aaKnown RBP20.14■□□□□ 0.81
PHGDH-234ENST00000642041 MIGA2Q7L4E1 593 aa20.14■□□□□ 0.81
PHGDH-234ENST00000642041 DZIP1Q86YF9 867 aaKnown RBP20.14■□□□□ 0.81
PHGDH-234ENST00000642041 C11orf49Q9H6J7 331 aa20.14■□□□□ 0.81
PHGDH-234ENST00000642041 SLC4A4Q9Y6R1 1079 aa20.14■□□□□ 0.81
PHGDH-234ENST00000642041 MCM4P33991 863 aa20.13■□□□□ 0.81
PHGDH-234ENST00000642041 PPP2R5BQ15173 497 aa20.13■□□□□ 0.81
PHGDH-234ENST00000642041 CSPP1Q1MSJ5 1256 aa20.13■□□□□ 0.81
PHGDH-234ENST00000642041 SYMPKQ92797 1274 aaKnown RBP20.13■□□□□ 0.81
PHGDH-234ENST00000642041 NSUN4Q96CB9 384 aaKnown RBP20.13■□□□□ 0.81
PHGDH-234ENST00000642041 FAM161BQ96MY7 647 aa20.13■□□□□ 0.81
PHGDH-234ENST00000642041 ANAPC4Q9UJX5 808 aa20.13■□□□□ 0.81
PHGDH-234ENST00000642041 TAOK2Q9UL54 1235 aa20.13■□□□□ 0.81
PHGDH-234ENST00000642041 COL2A1P02458 1487 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-234ENST00000642041 TDO2P48775 406 aa20.12■□□□□ 0.81
PHGDH-234ENST00000642041 PPP4CP60510 307 aa20.12■□□□□ 0.81
PHGDH-234ENST00000642041 NOL9Q5SY16 702 aaKnown RBP20.12■□□□□ 0.81
PHGDH-234ENST00000642041 MFSD6Q6ZSS7 791 aa20.12■□□□□ 0.81
PHGDH-234ENST00000642041 Q6ZUG5 572 aa20.12■□□□□ 0.81
PHGDH-234ENST00000642041 TEKT1Q969V4 418 aa20.12■□□□□ 0.81
PHGDH-234ENST00000642041 FAM163AQ96GL9 167 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-234ENST00000642041 RCAN1P53805 252 aa20.11■□□□□ 0.81
PHGDH-234ENST00000642041 GRIK5Q16478 980 aa20.11■□□□□ 0.81
PHGDH-234ENST00000642041 CCDC178Q5BJE1 867 aa20.11■□□□□ 0.81
PHGDH-234ENST00000642041 CPLX2Q6PUV4 134 aaKnown RBP20.11■□□□□ 0.81
PHGDH-234ENST00000642041 TNPO1Q92973 898 aaKnown RBP20.11■□□□□ 0.81
PHGDH-234ENST00000642041 COA7Q96BR5 231 aa20.11■□□□□ 0.81
PHGDH-234ENST00000642041 ZDHHC15Q96MV8 337 aa20.11■□□□□ 0.81
PHGDH-234ENST00000642041 MRIQ9BWK5 157 aa20.11■□□□□ 0.81
PHGDH-234ENST00000642041 ZNF287Q9HBT7 754 aa20.11■□□□□ 0.81
PHGDH-234ENST00000642041 GSG1L2A8MUP6 293 aa20.1■□□□□ 0.81
PHGDH-234ENST00000642041 BRD1O95696 1058 aa20.1■□□□□ 0.81
PHGDH-234ENST00000642041 PRDX5P30044 214 aa20.1■□□□□ 0.81
PHGDH-234ENST00000642041 AKNAD1Q5T1N1 836 aa20.1■□□□□ 0.81
PHGDH-234ENST00000642041 ZNF697Q5TEC3 545 aa20.1■□□□□ 0.81
PHGDH-234ENST00000642041 FASTKD5Q7L8L6 764 aaKnown RBP20.1■□□□□ 0.81
PHGDH-234ENST00000642041 MAFAQ8NHW3 353 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-234ENST00000642041 SLC45A1Q9Y2W3 748 aa20.1■□□□□ 0.81
PHGDH-234ENST00000642041 DDX60LQ5H9U9 1706 aaKnown RBP20.1■□□□□ 0.81
PHGDH-234ENST00000642041 ERICH2A1L162 156 aa20.09■□□□□ 0.81
PHGDH-234ENST00000642041 PFKFB2O60825 505 aa20.09■□□□□ 0.81
PHGDH-234ENST00000642041 HMGCRP04035 888 aa20.09■□□□□ 0.81
PHGDH-234ENST00000642041 LIFRP42702 1097 aa20.09■□□□□ 0.81
PHGDH-234ENST00000642041 MECOMQ03112 1051 aa20.09■□□□□ 0.81
PHGDH-234ENST00000642041 TOB2Q14106 344 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-234ENST00000642041 SBK1Q52WX2 424 aa20.09■□□□□ 0.81
PHGDH-234ENST00000642041 APOBEC3HQ6NTF7 200 aaKnown RBP20.09■□□□□ 0.81
PHGDH-234ENST00000642041 STAG1Q8WVM7 1258 aa20.09■□□□□ 0.81
PHGDH-234ENST00000642041 CDX2Q99626 313 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-234ENST00000642041 RIOK1Q9BRS2 568 aaKnown RBP20.09■□□□□ 0.81
PHGDH-234ENST00000642041 HMX1Q9NP08 348 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-234ENST00000642041 ARPP21Q9UBL0 812 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-234ENST00000642041 OGDHLQ9ULD0 1010 aa20.09■□□□□ 0.81
PHGDH-234ENST00000642041 TPCN1Q9ULQ1 816 aa20.09■□□□□ 0.81
PHGDH-234ENST00000642041 MYO5AQ9Y4I1 1855 aaKnown RBP20.08■□□□□ 0.81
PHGDH-234ENST00000642041 CDKL5O76039 1030 aa20.08■□□□□ 0.81
PHGDH-234ENST00000642041 MDM2Q00987 491 aaPredicted RBP20.08■□□□□ 0.81
PHGDH-234ENST00000642041 NBR1Q14596 966 aa20.08■□□□□ 0.81
PHGDH-234ENST00000642041 ME3Q16798 604 aa20.08■□□□□ 0.81
PHGDH-234ENST00000642041 SYNE3Q6ZMZ3 975 aa20.08■□□□□ 0.81
PHGDH-234ENST00000642041 MB21D2Q8IYB1 491 aaPredicted RBP20.08■□□□□ 0.81
PHGDH-234ENST00000642041 GTF3C6Q969F1 213 aa20.08■□□□□ 0.81
PHGDH-234ENST00000642041 ARMT1Q9H993 441 aa20.08■□□□□ 0.81
PHGDH-234ENST00000642041 PFASO15067 1338 aa20.07■□□□□ 0.8
PHGDH-234ENST00000642041 A0A0G2JLL6 359 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-234ENST00000642041 PRRT2Q7Z6L0 340 aaPredicted RBP20.07■□□□□ 0.8
PHGDH-234ENST00000642041 FAM151AQ8WW52 585 aa20.07■□□□□ 0.8
PHGDH-234ENST00000642041 ESR2Q92731 530 aa20.07■□□□□ 0.8
PHGDH-234ENST00000642041 BRF1Q92994 677 aa20.07■□□□□ 0.8
PHGDH-234ENST00000642041 FOXP2O15409 715 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms