RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ERCC5P28715 1186 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-221ENST00000640341 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
SCARB2-221ENST00000640341 CC2D1AQ6P1N0 951 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-221ENST00000640341 PHF20Q9BVI0 1012 aa16.53■□□□□ 0.24
SCARB2-221ENST00000640341 DCCP43146 1447 aa16.53■□□□□ 0.24
SCARB2-221ENST00000640341 PP2D1A8MPX8 630 aa16.53■□□□□ 0.24
SCARB2-221ENST00000640341 ST5P78524 1137 aa16.53■□□□□ 0.24
SCARB2-221ENST00000640341 NT5DC1Q5TFE4 455 aa16.53■□□□□ 0.24
SCARB2-221ENST00000640341 C4AP0C0L4 1744 aa16.53■□□□□ 0.24
SCARB2-221ENST00000640341 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
SCARB2-221ENST00000640341 LOC102724428A0A0B4J2F2 783 aa16.52■□□□□ 0.24
SCARB2-221ENST00000640341 TRIM49BA6NDI0 452 aa16.52■□□□□ 0.24
SCARB2-221ENST00000640341 SIK1P57059 783 aa16.52■□□□□ 0.24
SCARB2-221ENST00000640341 MAPK8IP2Q13387 824 aaPredicted RBP16.52■□□□□ 0.24
SCARB2-221ENST00000640341 SMC1AQ14683 1233 aaKnown RBP16.52■□□□□ 0.24
SCARB2-221ENST00000640341 INTS5Q6P9B9 1019 aaKnown RBP16.52■□□□□ 0.24
SCARB2-221ENST00000640341 SLC35F6Q8N357 371 aa16.52■□□□□ 0.24
SCARB2-221ENST00000640341 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
SCARB2-221ENST00000640341 SUGCTQ9HAC7 445 aa16.52■□□□□ 0.24
SCARB2-221ENST00000640341 ADD3Q9UEY8 706 aaKnown RBP16.52■□□□□ 0.24
SCARB2-221ENST00000640341 IQUBQ8NA54 791 aa16.52■□□□□ 0.24
SCARB2-221ENST00000640341 GUCA1BQ9UMX6 200 aa16.52■□□□□ 0.24
SCARB2-221ENST00000640341 PHACTR2O75167 634 aa16.52■□□□□ 0.23
SCARB2-221ENST00000640341 TBC1D8O95759 1140 aa16.52■□□□□ 0.23
SCARB2-221ENST00000640341 GYPCP04921 128 aa16.52■□□□□ 0.23
SCARB2-221ENST00000640341 PRDX5P30044 214 aa16.52■□□□□ 0.23
SCARB2-221ENST00000640341 UBXN1Q04323 297 aa16.52■□□□□ 0.23
SCARB2-221ENST00000640341 TROAPQ12815 778 aa16.52■□□□□ 0.23
SCARB2-221ENST00000640341 ITPK1Q13572 414 aa16.52■□□□□ 0.23
SCARB2-221ENST00000640341 KRT31Q15323 416 aa16.52■□□□□ 0.23
SCARB2-221ENST00000640341 CTR9Q6PD62 1173 aa16.52■□□□□ 0.23
SCARB2-221ENST00000640341 GPR161Q8N6U8 529 aaKnown RBP16.52■□□□□ 0.23
SCARB2-221ENST00000640341 BCL9O00512 1426 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 CCDC66A2RUB6 948 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 RNF225M0QZC1 329 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-221ENST00000640341 MYO1BO43795 1136 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 ZRANB2O95218 330 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCARB2-221ENST00000640341 ERCC3P19447 782 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 CELF1Q92879 486 aaKnown RBP16.51■□□□□ 0.23
SCARB2-221ENST00000640341 HINFPQ9BQA5 517 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 PPP1R3GB7ZBB8 358 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 MFAP3LO75121 409 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 KRT9P35527 623 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 NELFBQ8WX92 580 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 RIOK1Q9BRS2 568 aaKnown RBP16.51■□□□□ 0.23
SCARB2-221ENST00000640341 MCM9Q9NXL9 1143 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 TRIM10Q9UDY6 481 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 XDHP47989 1333 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 ENC1O14682 589 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 CPVLQ9H3G5 476 aa16.51■□□□□ 0.23
SCARB2-221ENST00000640341 PRPF3O43395 683 aaKnown RBP16.5■□□□□ 0.23
SCARB2-221ENST00000640341 CAMTA2O94983 1202 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 STAT6P42226 847 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 DDB1Q16531 1140 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 ANKRD20A12PQ8NF67 263 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 PCMTD1Q96MG8 357 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-221ENST00000640341 GSDMAQ96QA5 445 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 MYH7P12883 1935 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 NUTM2BA6NNL0 878 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-221ENST00000640341 NUTM2EB1AL46 878 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-221ENST00000640341 KCNQ2O43526 872 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 NTSR2O95665 410 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 FERMT2Q96AC1 680 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 PARP4Q9UKK3 1724 aaKnown RBP16.5■□□□□ 0.23
SCARB2-221ENST00000640341 PAK1Q13153 545 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 TMTC3Q6ZXV5 915 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 CTAGE1Q96RT6 745 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 STX8Q9UNK0 236 aa16.5■□□□□ 0.23
SCARB2-221ENST00000640341 CTAGE9A4FU28 777 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 LONRF2Q1L5Z9 754 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 SKIDA1Q1XH10 827 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 APTXQ7Z2E3 356 aaKnown RBP16.49■□□□□ 0.23
SCARB2-221ENST00000640341 CHP1Q99653 195 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 USP17L8P0C7I0 530 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 SCG2P13521 617 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 MECOMQ03112 1051 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 JAKMIP3Q5VZ66 844 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 CNGA4Q8IV77 575 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 ZNF384Q8TF68 577 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 FAM84BQ96KN1 310 aaPredicted RBP16.49■□□□□ 0.23
SCARB2-221ENST00000640341 GDAP1L1Q96MZ0 367 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 PANX2Q96RD6 677 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 FAM53CQ9NYF3 392 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 STRCP1A6NGW2 1772 aa16.49■□□□□ 0.23
SCARB2-221ENST00000640341 KCNJ18B7U540 433 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 GOLGA8HP0CJ92 632 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 LMAN1P49257 510 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 FUT2Q10981 343 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 KCNJ12Q14500 433 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 NCAPH2Q6IBW4 605 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 HEATR3Q7Z4Q2 680 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 SPATA20Q8TB22 786 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 DYNLL2Q96FJ2 89 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 MTRQ99707 1265 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 TXLNAP40222 546 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 ERVK-24P63145 666 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 PARP10Q53GL7 1025 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 SLC51AQ86UW1 340 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 STAG2Q8N3U4 1231 aa16.48■□□□□ 0.23
SCARB2-221ENST00000640341 UBR2Q8IWV8 1755 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms