RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 HAND2P61296 217 aa20.17■□□□□ 0.82
LIN28B-202ENST00000635857 TFAP4Q01664 338 aa20.17■□□□□ 0.82
LIN28B-202ENST00000635857 RRP12Q5JTH9 1297 aaKnown RBP20.17■□□□□ 0.82
LIN28B-202ENST00000635857 CATSPERGQ6ZRH7 1159 aa20.17■□□□□ 0.82
LIN28B-202ENST00000635857 P2RX7Q99572 595 aaKnown RBP20.17■□□□□ 0.82
LIN28B-202ENST00000635857 CWC22Q9HCG8 908 aaKnown RBP20.17■□□□□ 0.82
LIN28B-202ENST00000635857 NYAP2Q9P242 653 aa20.17■□□□□ 0.82
LIN28B-202ENST00000635857 MGAMO43451 1857 aa20.17■□□□□ 0.82
LIN28B-202ENST00000635857 PLIN4Q96Q06 1357 aa20.17■□□□□ 0.82
LIN28B-202ENST00000635857 MYH4Q9Y623 1939 aa20.17■□□□□ 0.82
LIN28B-202ENST00000635857 LAMA4Q16363 1823 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 CCDC85CA6NKD9 419 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 TNPO2O14787 897 aaKnown RBP20.16■□□□□ 0.82
LIN28B-202ENST00000635857 WDR46O15213 610 aaKnown RBP20.16■□□□□ 0.82
LIN28B-202ENST00000635857 TTLL1O95922 423 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 CHMLP26374 656 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 IMMTQ16891 758 aaKnown RBP20.16■□□□□ 0.82
LIN28B-202ENST00000635857 FAM47AQ5JRC9 791 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 MFSD6Q6ZSS7 791 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 SPICE1Q8N0Z3 855 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 NEDD1Q8NHV4 660 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 PAGR1Q9BTK6 254 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 ARHGAP39Q9C0H5 1083 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 CLIP2Q9UDT6 1046 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 PTPN22Q9Y2R2 807 aa20.16■□□□□ 0.82
LIN28B-202ENST00000635857 ORC4O43929 436 aa20.15■□□□□ 0.82
LIN28B-202ENST00000635857 CASC1Q6TDU7 716 aa20.15■□□□□ 0.82
LIN28B-202ENST00000635857 GPRC5AQ8NFJ5 357 aa20.15■□□□□ 0.82
LIN28B-202ENST00000635857 COA7Q96BR5 231 aa20.15■□□□□ 0.82
LIN28B-202ENST00000635857 PPP4R2Q9NY27 417 aa20.15■□□□□ 0.82
LIN28B-202ENST00000635857 HPS5Q9UPZ3 1129 aa20.15■□□□□ 0.82
LIN28B-202ENST00000635857 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.15■□□□□ 0.82
LIN28B-202ENST00000635857 ZSWIM8A7E2V4 1837 aa20.15■□□□□ 0.82
LIN28B-202ENST00000635857 MYPNQ86TC9 1320 aa20.14■□□□□ 0.81
LIN28B-202ENST00000635857 CCNA1P78396 465 aa20.14■□□□□ 0.81
LIN28B-202ENST00000635857 BMP2KLQ5H9B9 411 aa20.14■□□□□ 0.81
LIN28B-202ENST00000635857 AKNAD1Q5T1N1 836 aa20.14■□□□□ 0.81
LIN28B-202ENST00000635857 CEP95Q96GE4 821 aa20.14■□□□□ 0.81
LIN28B-202ENST00000635857 TRIM47Q96LD4 638 aa20.14■□□□□ 0.81
LIN28B-202ENST00000635857 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.14■□□□□ 0.81
LIN28B-202ENST00000635857 MTMR4Q9NYA4 1195 aa20.14■□□□□ 0.81
LIN28B-202ENST00000635857 HOXC10Q9NYD6 342 aa20.14■□□□□ 0.81
LIN28B-202ENST00000635857 SYNPO2Q9UMS6 1093 aa20.14■□□□□ 0.81
LIN28B-202ENST00000635857 FLOT1O75955 427 aa20.13■□□□□ 0.81
LIN28B-202ENST00000635857 NT5C2P49902 561 aa20.13■□□□□ 0.81
LIN28B-202ENST00000635857 COG2Q14746 738 aa20.13■□□□□ 0.81
LIN28B-202ENST00000635857 SAMD1Q6SPF0 538 aaPredicted RBP20.13■□□□□ 0.81
LIN28B-202ENST00000635857 KIAA1211Q6ZU35 1233 aa20.13■□□□□ 0.81
LIN28B-202ENST00000635857 SIAH1Q8IUQ4 282 aa20.13■□□□□ 0.81
LIN28B-202ENST00000635857 RAET1EQ8TD07 263 aa20.13■□□□□ 0.81
LIN28B-202ENST00000635857 STAG1Q8WVM7 1258 aa20.13■□□□□ 0.81
LIN28B-202ENST00000635857 MORF4L1Q9UBU8 362 aa20.13■□□□□ 0.81
LIN28B-202ENST00000635857 SRRDQ9UH36 339 aa20.13■□□□□ 0.81
LIN28B-202ENST00000635857 ISY1Q9ULR0 285 aaKnown RBP20.13■□□□□ 0.81
LIN28B-202ENST00000635857 STX8Q9UNK0 236 aa20.13■□□□□ 0.81
LIN28B-202ENST00000635857 IGKV6D-41A0A0C4DH26 115 aa20.12■□□□□ 0.81
LIN28B-202ENST00000635857 ERVK-9P63128 1117 aa20.12■□□□□ 0.81
LIN28B-202ENST00000635857 ERVK-24P63145 666 aa20.12■□□□□ 0.81
LIN28B-202ENST00000635857 SLC9C1Q4G0N8 1177 aa20.12■□□□□ 0.81
LIN28B-202ENST00000635857 NBPF11Q86T75 865 aa20.12■□□□□ 0.81
LIN28B-202ENST00000635857 ESR2Q92731 530 aa20.12■□□□□ 0.81
LIN28B-202ENST00000635857 RABGAP1Q9Y3P9 1069 aa20.12■□□□□ 0.81
LIN28B-202ENST00000635857 MAPK4P31152 587 aa20.11■□□□□ 0.81
LIN28B-202ENST00000635857 MB21D1Q8N884 522 aa20.11■□□□□ 0.81
LIN28B-202ENST00000635857 PTCH2Q9Y6C5 1203 aa20.11■□□□□ 0.81
LIN28B-202ENST00000635857 SPDYE16A6NNV3 312 aaPredicted RBP20.1■□□□□ 0.81
LIN28B-202ENST00000635857 F5H6K3 240 aa20.1■□□□□ 0.81
LIN28B-202ENST00000635857 SGSM2O43147 1006 aa20.1■□□□□ 0.81
LIN28B-202ENST00000635857 FGRP09769 529 aa20.1■□□□□ 0.81
LIN28B-202ENST00000635857 KLRC3Q07444 240 aa20.1■□□□□ 0.81
LIN28B-202ENST00000635857 FAM83BQ5T0W9 1011 aa20.1■□□□□ 0.81
LIN28B-202ENST00000635857 LBX2Q6XYB7 198 aa20.1■□□□□ 0.81
LIN28B-202ENST00000635857 LRRC47Q8N1G4 583 aaKnown RBP20.1■□□□□ 0.81
LIN28B-202ENST00000635857 CNNM2Q9H8M5 875 aa20.1■□□□□ 0.81
LIN28B-202ENST00000635857 INCENPQ9NQS7 918 aa20.1■□□□□ 0.81
LIN28B-202ENST00000635857 U3KPZ7 1027 aaPredicted RBP20.1■□□□□ 0.81
LIN28B-202ENST00000635857 TRDNQ13061 729 aa20.09■□□□□ 0.81
LIN28B-202ENST00000635857 KIAA1755Q5JYT7 1200 aa20.09■□□□□ 0.81
LIN28B-202ENST00000635857 WDR78Q5VTH9 848 aa20.09■□□□□ 0.81
LIN28B-202ENST00000635857 SKAP1Q86WV1 359 aa20.09■□□□□ 0.81
LIN28B-202ENST00000635857 IQCA1Q86XH1 822 aa20.09■□□□□ 0.81
LIN28B-202ENST00000635857 TBC1D10CQ8IV04 446 aa20.09■□□□□ 0.81
LIN28B-202ENST00000635857 GMCL1P1Q8NEA9 526 aa20.09■□□□□ 0.81
LIN28B-202ENST00000635857 MKL1Q969V6 931 aa20.09■□□□□ 0.81
LIN28B-202ENST00000635857 KRT23Q9C075 422 aa20.09■□□□□ 0.81
LIN28B-202ENST00000635857 RBPJLQ9UBG7 517 aa20.09■□□□□ 0.81
LIN28B-202ENST00000635857 CTDP1Q9Y5B0 961 aaPredicted RBP20.09■□□□□ 0.81
LIN28B-202ENST00000635857 NDUFB10O96000 172 aa20.08■□□□□ 0.81
LIN28B-202ENST00000635857 CTGFP29279 349 aa20.08■□□□□ 0.81
LIN28B-202ENST00000635857 DSG3P32926 999 aa20.08■□□□□ 0.81
LIN28B-202ENST00000635857 CAP1Q01518 475 aa20.08■□□□□ 0.81
LIN28B-202ENST00000635857 PRKCZQ05513 592 aa20.08■□□□□ 0.81
LIN28B-202ENST00000635857 CCDC178Q5BJE1 867 aa20.08■□□□□ 0.81
LIN28B-202ENST00000635857 IL25Q9H293 177 aa20.08■□□□□ 0.81
LIN28B-202ENST00000635857 TXNRD2Q9NNW7 524 aa20.08■□□□□ 0.81
LIN28B-202ENST00000635857 IVNS1ABPQ9Y6Y0 642 aa20.08■□□□□ 0.81
LIN28B-202ENST00000635857 CDC45O75419 566 aa20.07■□□□□ 0.8
LIN28B-202ENST00000635857 IKQ13123 557 aaPredicted RBP20.07■□□□□ 0.8
LIN28B-202ENST00000635857 PLS1Q14651 629 aa20.07■□□□□ 0.8
LIN28B-202ENST00000635857 SLFN13Q68D06 897 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms