RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 LBX2Q6XYB7 198 aa23.08■■□□□ 1.29
ATG4B-226ENST00000625810 APBA2Q99767 749 aa23.08■■□□□ 1.29
ATG4B-226ENST00000625810 CYP2D7A0A087X1C5 515 aa23.07■■□□□ 1.28
ATG4B-226ENST00000625810 CCDC17Q96LX7 622 aa23.07■■□□□ 1.28
ATG4B-226ENST00000625810 NBPF3Q9H094 633 aa23.07■■□□□ 1.28
ATG4B-226ENST00000625810 PUS7LQ9H0K6 701 aaKnown RBP23.07■■□□□ 1.28
ATG4B-226ENST00000625810 ARHGEF10LQ9HCE6 1279 aa23.07■■□□□ 1.28
ATG4B-226ENST00000625810 BTBD7Q9P203 1132 aa23.07■■□□□ 1.28
ATG4B-226ENST00000625810 SPDYE16A6NNV3 312 aaPredicted RBP23.06■■□□□ 1.28
ATG4B-226ENST00000625810 AKR1B1P15121 316 aa23.06■■□□□ 1.28
ATG4B-226ENST00000625810 CDK8P49336 464 aa23.06■■□□□ 1.28
ATG4B-226ENST00000625810 COG2Q14746 738 aa23.06■■□□□ 1.28
ATG4B-226ENST00000625810 TANGO6Q9C0B7 1094 aa23.06■■□□□ 1.28
ATG4B-226ENST00000625810 HOXC10Q9NYD6 342 aa23.06■■□□□ 1.28
ATG4B-226ENST00000625810 IVNS1ABPQ9Y6Y0 642 aa23.06■■□□□ 1.28
ATG4B-226ENST00000625810 CCND3P30281 292 aaPredicted RBP23.05■■□□□ 1.28
ATG4B-226ENST00000625810 ICA1Q05084 483 aa23.05■■□□□ 1.28
ATG4B-226ENST00000625810 MAP2K5Q13163 448 aa23.05■■□□□ 1.28
ATG4B-226ENST00000625810 SH2D4AQ9H788 454 aa23.05■■□□□ 1.28
ATG4B-226ENST00000625810 C16orf86Q6ZW13 317 aa23.04■■□□□ 1.28
ATG4B-226ENST00000625810 KBTBD3Q8NAB2 608 aa23.04■■□□□ 1.28
ATG4B-226ENST00000625810 C11orf49Q9H6J7 331 aa23.04■■□□□ 1.28
ATG4B-226ENST00000625810 LAMA3Q16787 3333 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 SLC15A5A6NIM6 579 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 SMIM22K7EJ46 135 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 PTPREP23469 700 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 ATP2B2Q01814 1243 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 TSHZ3Q63HK5 1081 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 LHX8Q68G74 356 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 CTR9Q6PD62 1173 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 CLEC10AQ8IUN9 316 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 C7orf61Q8IZ16 206 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 LPAR1Q92633 364 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 FLRT1Q9NZU1 646 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 TMX2Q9Y320 296 aa23.03■■□□□ 1.28
ATG4B-226ENST00000625810 KIAA1755Q5JYT7 1200 aa23.02■■□□□ 1.28
ATG4B-226ENST00000625810 STRBPQ96SI9 672 aaKnown RBP23.02■■□□□ 1.28
ATG4B-226ENST00000625810 ARPP21Q9UBL0 812 aaPredicted RBP23.02■■□□□ 1.28
ATG4B-226ENST00000625810 STAP2Q9UGK3 403 aa23.02■■□□□ 1.28
ATG4B-226ENST00000625810 PFASO15067 1338 aa23.02■■□□□ 1.28
ATG4B-226ENST00000625810 A0A0G2JMZ2 1700 aa23.02■■□□□ 1.28
ATG4B-226ENST00000625810 A0A1W2PPC1 479 aa23.01■■□□□ 1.27
ATG4B-226ENST00000625810 GRB14Q14449 540 aa23.01■■□□□ 1.27
ATG4B-226ENST00000625810 MFSD14CQ5VZR4 134 aa23.01■■□□□ 1.27
ATG4B-226ENST00000625810 SAMD1Q6SPF0 538 aaPredicted RBP23.01■■□□□ 1.27
ATG4B-226ENST00000625810 SIAH1Q8IUQ4 282 aa23.01■■□□□ 1.27
ATG4B-226ENST00000625810 SPICE1Q8N0Z3 855 aa23.01■■□□□ 1.27
ATG4B-226ENST00000625810 VCPKMTQ9H867 229 aa23.01■■□□□ 1.27
ATG4B-226ENST00000625810 RLFQ13129 1914 aa23■■□□□ 1.27
ATG4B-226ENST00000625810 RNF113AO15541 343 aaKnown RBP23■■□□□ 1.27
ATG4B-226ENST00000625810 FLOT1O75955 427 aa23■■□□□ 1.27
ATG4B-226ENST00000625810 HOXC6P09630 235 aa23■■□□□ 1.27
ATG4B-226ENST00000625810 COL6A1P12109 1028 aa23■■□□□ 1.27
ATG4B-226ENST00000625810 APPBP2Q92624 585 aa23■■□□□ 1.27
ATG4B-226ENST00000625810 KANSL2Q9H9L4 492 aa23■■□□□ 1.27
ATG4B-226ENST00000625810 ZMYND8Q9ULU4 1186 aaPredicted RBP23■■□□□ 1.27
ATG4B-226ENST00000625810 PCDHB15Q9Y5E8 787 aa23■■□□□ 1.27
ATG4B-226ENST00000625810 ZFYP08048 801 aaPredicted RBP22.99■■□□□ 1.27
ATG4B-226ENST00000625810 DSG3P32926 999 aa22.99■■□□□ 1.27
ATG4B-226ENST00000625810 PLS1Q14651 629 aa22.99■■□□□ 1.27
ATG4B-226ENST00000625810 LRRFIP1Q32MZ4 808 aaKnown RBP22.99■■□□□ 1.27
ATG4B-226ENST00000625810 OSBP2Q969R2 916 aa22.99■■□□□ 1.27
ATG4B-226ENST00000625810 MOV10L1Q9BXT6 1211 aaKnown RBP22.99■■□□□ 1.27
ATG4B-226ENST00000625810 SPATC1LQ9H0A9 340 aa22.99■■□□□ 1.27
ATG4B-226ENST00000625810 MINDY4BA8MYZ0 360 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 ERC2O15083 957 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 WDR46O15213 610 aaKnown RBP22.98■■□□□ 1.27
ATG4B-226ENST00000625810 RAD21O60216 631 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 EEF2P13639 858 aaKnown RBP22.98■■□□□ 1.27
ATG4B-226ENST00000625810 DPP9Q86TI2 863 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 STK11IPQ8N1F8 1099 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 MB21D1Q8N884 522 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 NPLOC4Q8TAT6 608 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 GDF15Q99988 308 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 MKNK2Q9HBH9 465 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 FRMPD3Q5JV73 1810 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 ZNF236Q9UL36 1845 aa22.98■■□□□ 1.27
ATG4B-226ENST00000625810 GSG1L2A8MUP6 293 aa22.97■■□□□ 1.27
ATG4B-226ENST00000625810 STRNO43815 780 aa22.97■■□□□ 1.27
ATG4B-226ENST00000625810 IGHA2P01877 340 aa22.97■■□□□ 1.27
ATG4B-226ENST00000625810 SBK1Q52WX2 424 aa22.97■■□□□ 1.27
ATG4B-226ENST00000625810 GIMAP6Q6P9H5 292 aa22.97■■□□□ 1.27
ATG4B-226ENST00000625810 ATG4CQ96DT6 458 aa22.97■■□□□ 1.27
ATG4B-226ENST00000625810 ZBTB47Q9UFB7 747 aaPredicted RBP22.97■■□□□ 1.27
ATG4B-226ENST00000625810 TTC41PQ6P2S7 1318 aa22.97■■□□□ 1.27
ATG4B-226ENST00000625810 SOX1O00570 391 aaPredicted RBP22.96■■□□□ 1.27
ATG4B-226ENST00000625810 GPAA1O43292 621 aa22.96■■□□□ 1.27
ATG4B-226ENST00000625810 APPP05067 770 aa22.96■■□□□ 1.27
ATG4B-226ENST00000625810 SYN1P17600 705 aa22.96■■□□□ 1.27
ATG4B-226ENST00000625810 GNAT2P19087 354 aa22.96■■□□□ 1.27
ATG4B-226ENST00000625810 ERCC3P19447 782 aa22.96■■□□□ 1.27
ATG4B-226ENST00000625810 RRP1P56182 461 aaKnown RBP22.96■■□□□ 1.27
ATG4B-226ENST00000625810 NCAPG2Q86XI2 1143 aa22.96■■□□□ 1.27
ATG4B-226ENST00000625810 SHCBP1Q8NEM2 672 aa22.96■■□□□ 1.27
ATG4B-226ENST00000625810 GOPCQ9HD26 462 aa22.96■■□□□ 1.27
ATG4B-226ENST00000625810 CNGA1P29973 690 aa22.95■■□□□ 1.26
ATG4B-226ENST00000625810 CYP2C19P33261 490 aa22.95■■□□□ 1.26
ATG4B-226ENST00000625810 BMP8BP34820 402 aa22.95■■□□□ 1.26
ATG4B-226ENST00000625810 TDO2P48775 406 aa22.95■■□□□ 1.26
ATG4B-226ENST00000625810 ADORA2AP29274 412 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms