RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 GPR101Q96P66 508 aaPredicted RBP10.06□□□□□ -0.8
VPS11-206ENST00000614944 SH3GL3Q99963 347 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 IDI2Q9BXS1 227 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 TCP11L1Q9NUJ3 509 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 RWDD2BP57060 319 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 PPP2R5BQ15173 497 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 GET4Q7L5D6 327 aaPredicted RBP10.06□□□□□ -0.8
VPS11-206ENST00000614944 ANKS1AQ92625 1134 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 ZNF396Q96N95 335 aaPredicted RBP10.06□□□□□ -0.8
VPS11-206ENST00000614944 ATF5Q9Y2D1 282 aaPredicted RBP10.06□□□□□ -0.8
VPS11-206ENST00000614944 DAGLAQ9Y4D2 1042 aa10.06□□□□□ -0.8
VPS11-206ENST00000614944 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.06□□□□□ -0.8
VPS11-206ENST00000614944 ATRNL1Q5VV63 1379 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 PPIP5K2O43314 1243 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 NOVP48745 357 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 ZSCAN23Q3MJ62 389 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 C12orf60Q5U649 245 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 RSBN1LQ6PCB5 846 aaPredicted RBP10.05□□□□□ -0.8
VPS11-206ENST00000614944 TBC1D10CQ8IV04 446 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 CCDC26Q8TAB7 109 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 TEKT1Q969V4 418 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 EHD4Q9H223 541 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 TAOK3Q9H2K8 898 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 PFKFB2O60825 505 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 BTDP43251 543 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 AOC3Q16853 763 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 ZNF280DQ6N043 979 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 OLFM4Q6UX06 510 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 MICALL1Q8N3F8 863 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 ZNF287Q9HBT7 754 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 CHCHD3Q9NX63 227 aaKnown RBP10.05□□□□□ -0.8
VPS11-206ENST00000614944 TAF6LQ9Y6J9 622 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 MYH8P13535 1937 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 YDJCA8MPS7 323 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 RIMBP2O15034 1052 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 GRIK5Q16478 980 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 METTL16Q86W50 562 aaKnown RBP10.05□□□□□ -0.8
VPS11-206ENST00000614944 GIMAP7Q8NHV1 300 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 ZBED3Q96IU2 234 aaPredicted RBP10.05□□□□□ -0.8
VPS11-206ENST00000614944 MAP3K14Q99558 947 aa10.05□□□□□ -0.8
VPS11-206ENST00000614944 G3V3G9 751 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 DYNLL1P63167 89 aaKnown RBP10.04□□□□□ -0.8
VPS11-206ENST00000614944 NUCB2P80303 420 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 DCAF8Q5TAQ9 597 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 RALYLQ86SE5 291 aaKnown RBP10.04□□□□□ -0.8
VPS11-206ENST00000614944 FBXO18Q8NFZ0 1043 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 NFKBIEO00221 500 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 SH2B2O14492 632 aaPredicted RBP10.04□□□□□ -0.8
VPS11-206ENST00000614944 PRKAB2O43741 272 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 ANTXR2P58335 489 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 RAB3GAP1Q15042 981 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 MFSD6Q6ZSS7 791 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 AMOTL1Q8IY63 956 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 NIM1KQ8IY84 436 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 RPUSD2Q8IZ73 545 aaKnown RBP10.04□□□□□ -0.8
VPS11-206ENST00000614944 MIGA1Q8NAN2 632 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 GOLGA5Q8TBA6 731 aa10.04□□□□□ -0.8
VPS11-206ENST00000614944 UPF3BQ9BZI7 483 aaKnown RBP10.04□□□□□ -0.8
VPS11-206ENST00000614944 AATFQ9NY61 560 aaKnown RBP eCLIP10.04□□□□□ -0.8
VPS11-206ENST00000614944 FZD9O00144 591 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 MYBL2P10244 700 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 TNIP1Q15025 636 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 NFXL1Q6ZNB6 911 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 C17orf53Q8N3J3 647 aaPredicted RBP10.03□□□□□ -0.8
VPS11-206ENST00000614944 SH3RF3Q8TEJ3 882 aaPredicted RBP10.03□□□□□ -0.8
VPS11-206ENST00000614944 GTF3C6Q969F1 213 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 ENTPD3O75355 529 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 CRKP46108 304 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 APOBEC3HQ6NTF7 200 aaKnown RBP10.03□□□□□ -0.8
VPS11-206ENST00000614944 IGDCC4Q8TDY8 1250 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 ESR2Q92731 530 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 SWAP70Q9UH65 585 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 TTF2Q9UNY4 1162 aaKnown RBP10.03□□□□□ -0.8
VPS11-206ENST00000614944 FLT1P17948 1338 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 ZNF280AP59817 542 aaPredicted RBP10.03□□□□□ -0.8
VPS11-206ENST00000614944 TPM4P67936 248 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 Q6ZUG5 572 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 C16orf86Q6ZW13 317 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 CCDC186Q7Z3E2 898 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 SMARCC2Q8TAQ2 1214 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 DHX36Q9H2U1 1008 aaKnown RBP10.03□□□□□ -0.8
VPS11-206ENST00000614944 VEZTQ9HBM0 779 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 TPCN1Q9ULQ1 816 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 ANGEL1Q9UNK9 670 aaKnown RBP10.03□□□□□ -0.8
VPS11-206ENST00000614944 NEDD4P46934 1319 aa10.03□□□□□ -0.8
VPS11-206ENST00000614944 ZC3H4Q9UPT8 1303 aaKnown RBP10.03□□□□□ -0.8
VPS11-206ENST00000614944 PRC1O43663 620 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 RAD21O60216 631 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 PDE4BQ07343 736 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 CAVIN1Q6NZI2 390 aaKnown RBP10.02□□□□□ -0.81
VPS11-206ENST00000614944 NME8Q8N427 588 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 DPF2Q92785 391 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 DBNDD1Q9H9R9 158 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 MYH15Q9Y2K3 1946 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 NAT1P18440 290 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 MNAT1P51948 309 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 GABPAQ06546 454 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 ME3Q16798 604 aa10.02□□□□□ -0.81
VPS11-206ENST00000614944 KMT5BQ4FZB7 885 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms