RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 TAB2Q9NYJ8 693 aa17.35■□□□□ 0.37
TNXB-208ENST00000611016 TRPC6Q9Y210 931 aa17.35■□□□□ 0.37
TNXB-208ENST00000611016 FAM135BQ49AJ0 1406 aa17.35■□□□□ 0.37
TNXB-208ENST00000611016 CNGA1P29973 690 aa17.35■□□□□ 0.37
TNXB-208ENST00000611016 RNASE9P60153 205 aaKnown RBP17.35■□□□□ 0.37
TNXB-208ENST00000611016 ICA1Q05084 483 aa17.35■□□□□ 0.37
TNXB-208ENST00000611016 KIF22Q14807 665 aa17.35■□□□□ 0.37
TNXB-208ENST00000611016 ZNF772Q68DY9 489 aaPredicted RBP17.35■□□□□ 0.37
TNXB-208ENST00000611016 SSH2Q76I76 1423 aa17.35■□□□□ 0.37
TNXB-208ENST00000611016 NLRP12P59046 1061 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 UAP1Q16222 522 aaPredicted RBP17.34■□□□□ 0.37
TNXB-208ENST00000611016 PRR16Q569H4 304 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 FAM102BQ5T8I3 360 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 RDH13Q8NBN7 331 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 CAPN2P17655 700 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 NCAPG2Q86XI2 1143 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 PNMA1Q8ND90 353 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 DEPTORQ8TB45 409 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 NT5C3AQ9H0P0 336 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 MRPL11Q9Y3B7 192 aaKnown RBP17.34■□□□□ 0.37
TNXB-208ENST00000611016 PLEKHG1Q9ULL1 1385 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 POLR2MP0CAP2 368 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 EFCAB6Q5THR3 1501 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 HAUS7Q99871 368 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 TRIM7Q9C029 511 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 RSPH14Q9UHP6 348 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 ABCC4O15439 1325 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 ERCC6LQ2NKX8 1250 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 CPLX4Q7Z7G2 160 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 UBLCP1Q8WVY7 318 aaPredicted RBP17.34■□□□□ 0.37
TNXB-208ENST00000611016 ODF2LQ9ULJ1 636 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 USTQ9Y2C2 406 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 TNNI1P19237 187 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 ANKRD35Q8N283 1001 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 HAUS2Q9NVX0 235 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 STIM2Q9P246 746 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
TNXB-208ENST00000611016 STK10O94804 968 aaKnown RBP17.33■□□□□ 0.37
TNXB-208ENST00000611016 LPXNO60711 386 aa17.33■□□□□ 0.37
TNXB-208ENST00000611016 PABPC4Q13310 644 aaKnown RBP eCLIP17.33■□□□□ 0.37
TNXB-208ENST00000611016 XDHP47989 1333 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 KCNQ4P56696 695 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 DCUN1D2Q6PH85 259 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 DAAM2Q86T65 1068 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 TMTC1Q8IUR5 882 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 BLIDQ8IZY5 108 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 OGFRQ9NZT2 677 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 TNKSO95271 1327 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 HSPD1P10809 573 aaKnown RBP17.33■□□□□ 0.36
TNXB-208ENST00000611016 SLC9C1Q4G0N8 1177 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 MAIP1Q8WWC4 291 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 CTTNBP2NLQ9P2B4 639 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 KLRF2D3W0D1 207 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 FLOT1O75955 427 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 SERPINB2P05120 415 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 PTH1RQ03431 593 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 ME3Q16798 604 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 FBXO11Q86XK2 927 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 HACE1Q8IYU2 909 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 SYCE1Q8N0S2 351 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 TM6SF1Q9BZW5 370 aa17.33■□□□□ 0.36
TNXB-208ENST00000611016 PHKA1P46020 1223 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 CFAP157Q5JU67 520 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 PUS3Q9BZE2 481 aaKnown RBP17.32■□□□□ 0.36
TNXB-208ENST00000611016 PNMA2Q9UL42 364 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 IL6STP40189 918 aaPredicted RBP17.32■□□□□ 0.36
TNXB-208ENST00000611016 TECP42680 631 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 RNF169Q8NCN4 708 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 CLRN2A0PK11 232 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 BCRP11274 1271 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 FANCBQ8NB91 859 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 KDM3AQ9Y4C1 1321 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 PDE8BO95263 885 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 KRT27Q7Z3Y8 459 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 ARHGEF25Q86VW2 580 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 GTF3C6Q969F1 213 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 MYOM2P54296 1465 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 NLRP1Q9C000 1473 aa17.32■□□□□ 0.36
TNXB-208ENST00000611016 GNA14O95837 355 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 PSMC4P43686 418 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 ABCB5Q2M3G0 1257 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.36
TNXB-208ENST00000611016 B4GALNT4Q76KP1 1039 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 GPBP1Q86WP2 473 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 SERTAD1Q9UHV2 236 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 FAM184BQ9ULE4 1060 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 NFE2L3Q9Y4A8 694 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 TMEM232C9JQI7 657 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 DNAJC21Q5F1R6 531 aaKnown RBP17.31■□□□□ 0.36
TNXB-208ENST00000611016 SLFN13Q68D06 897 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 LRMPQ12912 555 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.36
TNXB-208ENST00000611016 ZNF274Q96GC6 653 aaPredicted RBP17.31■□□□□ 0.36
TNXB-208ENST00000611016 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.31■□□□□ 0.36
TNXB-208ENST00000611016 KDM2BQ8NHM5 1336 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
TNXB-208ENST00000611016 ADORA1P30542 326 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 PPP2R3AQ06190 1150 aa17.31■□□□□ 0.36
TNXB-208ENST00000611016 MCF2L2Q86YR7 1114 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms