RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 FMNL1O95466 1100 aaPredicted RBP17.97■□□□□ 0.47
ERCC1-217ENST00000592905 POTEEQ6S8J3 1075 aa17.97■□□□□ 0.47
ERCC1-217ENST00000592905 NEDD1Q8NHV4 660 aa17.97■□□□□ 0.47
ERCC1-217ENST00000592905 CEP95Q96GE4 821 aa17.97■□□□□ 0.47
ERCC1-217ENST00000592905 VCPKMTQ9H867 229 aa17.97■□□□□ 0.47
ERCC1-217ENST00000592905 ZMYM6O95789 1325 aa17.97■□□□□ 0.47
ERCC1-217ENST00000592905 LAMA4Q16363 1823 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 CENPFP49454 3210 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 NMT2O60551 498 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 GCLCP48506 637 aaPredicted RBP17.96■□□□□ 0.47
ERCC1-217ENST00000592905 PKN2Q16513 984 aaKnown RBP17.96■□□□□ 0.47
ERCC1-217ENST00000592905 FBXO46Q6PJ61 603 aaPredicted RBP17.96■□□□□ 0.47
ERCC1-217ENST00000592905 SAMD1Q6SPF0 538 aaPredicted RBP17.96■□□□□ 0.47
ERCC1-217ENST00000592905 TBC1D10CQ8IV04 446 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 NKX2-3Q8TAU0 364 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 RUFY2Q8WXA3 655 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 CHMP4CQ96CF2 233 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 PAGR1Q9BTK6 254 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 DSCC1Q9BVC3 393 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 TANGO6Q9C0B7 1094 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 SH2D4AQ9H788 454 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 TXNRD2Q9NNW7 524 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 PPP4R2Q9NY27 417 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 NYAP2Q9P242 653 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 HPS5Q9UPZ3 1129 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 PTPN22Q9Y2R2 807 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 RLFQ13129 1914 aa17.96■□□□□ 0.47
ERCC1-217ENST00000592905 TSPY2A6NKD2 308 aa17.95■□□□□ 0.46
ERCC1-217ENST00000592905 CCDC85CA6NKD9 419 aa17.95■□□□□ 0.46
ERCC1-217ENST00000592905 ZNF213O14771 459 aa17.95■□□□□ 0.46
ERCC1-217ENST00000592905 ORC4O43929 436 aa17.95■□□□□ 0.46
ERCC1-217ENST00000592905 PTH1RQ03431 593 aa17.95■□□□□ 0.46
ERCC1-217ENST00000592905 ARHGEF6Q15052 776 aa17.95■□□□□ 0.46
ERCC1-217ENST00000592905 MTMR4Q9NYA4 1195 aa17.95■□□□□ 0.46
ERCC1-217ENST00000592905 RBPJLQ9UBG7 517 aa17.95■□□□□ 0.46
ERCC1-217ENST00000592905 PARP14Q460N5 1801 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 SGSM2O43147 1006 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 FGRP09769 529 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 FAM110CQ1W6H9 321 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 Q3C1V9 767 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 AKNAD1Q5T1N1 836 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 IFFO2Q5TF58 517 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 MFSD6Q6ZSS7 791 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 LRRC47Q8N1G4 583 aaKnown RBP17.94■□□□□ 0.46
ERCC1-217ENST00000592905 NUP88Q99567 741 aaPredicted RBP17.94■□□□□ 0.46
ERCC1-217ENST00000592905 GOPCQ9HD26 462 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 IL17RBQ9NRM6 502 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 RAD50Q92878 1312 aa17.94■□□□□ 0.46
ERCC1-217ENST00000592905 FCGRTP55899 365 aa17.93■□□□□ 0.46
ERCC1-217ENST00000592905 FAM83BQ5T0W9 1011 aa17.93■□□□□ 0.46
ERCC1-217ENST00000592905 GPRC5AQ8NFJ5 357 aa17.93■□□□□ 0.46
ERCC1-217ENST00000592905 LPAR1Q92633 364 aa17.93■□□□□ 0.46
ERCC1-217ENST00000592905 GABRQQ9UN88 632 aa17.93■□□□□ 0.46
ERCC1-217ENST00000592905 PTCH2Q9Y6C5 1203 aa17.93■□□□□ 0.46
ERCC1-217ENST00000592905 PLIN4Q96Q06 1357 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 SPDYE16A6NNV3 312 aaPredicted RBP17.92■□□□□ 0.46
ERCC1-217ENST00000592905 F5H6K3 240 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 TNPO2O14787 897 aaKnown RBP17.92■□□□□ 0.46
ERCC1-217ENST00000592905 CNMDO75829 334 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 TTLL1O95922 423 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 KLRC3Q07444 240 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 COG2Q14746 738 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 IMMTQ16891 758 aaKnown RBP17.92■□□□□ 0.46
ERCC1-217ENST00000592905 BMP2KLQ5H9B9 411 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 STAG1Q8WVM7 1258 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 MKL1Q969V6 931 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 FBXO28Q9NVF7 368 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 MORF4L1Q9UBU8 362 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 CTNNA3Q9UI47 895 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 STX8Q9UNK0 236 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 COL11A1P12107 1806 aaPredicted RBP17.92■□□□□ 0.46
ERCC1-217ENST00000592905 NEDD4P46934 1319 aa17.92■□□□□ 0.46
ERCC1-217ENST00000592905 WDR46O15213 610 aaKnown RBP17.91■□□□□ 0.46
ERCC1-217ENST00000592905 FLOT1O75955 427 aa17.91■□□□□ 0.46
ERCC1-217ENST00000592905 NDUFB10O96000 172 aa17.91■□□□□ 0.46
ERCC1-217ENST00000592905 ERVK-9P63128 1117 aa17.91■□□□□ 0.46
ERCC1-217ENST00000592905 ERVK-24P63145 666 aa17.91■□□□□ 0.46
ERCC1-217ENST00000592905 PRKCZQ05513 592 aa17.91■□□□□ 0.46
ERCC1-217ENST00000592905 ERICH6BQ5W0A0 696 aa17.91■□□□□ 0.46
ERCC1-217ENST00000592905 BTBD7Q9P203 1132 aa17.91■□□□□ 0.46
ERCC1-217ENST00000592905 SRRDQ9UH36 339 aa17.91■□□□□ 0.46
ERCC1-217ENST00000592905 GNRH1P01148 92 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 HOXD10P28358 340 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 DSG3P32926 999 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 ATG4CQ96DT6 458 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 ZKSCAN3Q9BRR0 538 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 ESYT1Q9BSJ8 1104 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 PORCNQ9H237 461 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 RNF41Q9H4P4 317 aaPredicted RBP17.9■□□□□ 0.46
ERCC1-217ENST00000592905 HOXC10Q9NYD6 342 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 MTMR7Q9Y216 660 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 RABGAP1Q9Y3P9 1069 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 MYPNQ86TC9 1320 aa17.9■□□□□ 0.46
ERCC1-217ENST00000592905 SLFN13Q68D06 897 aa17.89■□□□□ 0.45
ERCC1-217ENST00000592905 GTF3C2Q8WUA4 911 aaPredicted RBP17.89■□□□□ 0.45
ERCC1-217ENST00000592905 PLXNB2O15031 1838 aa17.88■□□□□ 0.45
ERCC1-217ENST00000592905 B4E1Z4 1266 aa17.88■□□□□ 0.45
ERCC1-217ENST00000592905 KDM4AO75164 1064 aa17.88■□□□□ 0.45
ERCC1-217ENST00000592905 MYCP01106 439 aaPredicted RBP17.88■□□□□ 0.45
ERCC1-217ENST00000592905 FLT3LGP49771 235 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms