RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 GOPCQ9HD26 462 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 ABT1Q9ULW3 272 aaKnown RBP12.5□□□□□ -0.41
SMAD4-214ENST00000592186 AFG3L2Q9Y4W6 797 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 SIPA1L1O43166 1804 aa12.5□□□□□ -0.41
SMAD4-214ENST00000592186 ZNF157P51786 506 aaPredicted RBP12.49□□□□□ -0.41
SMAD4-214ENST00000592186 RCAN1P53805 252 aa12.49□□□□□ -0.41
SMAD4-214ENST00000592186 USP17L2Q6R6M4 530 aa12.49□□□□□ -0.41
SMAD4-214ENST00000592186 PNMA1Q8ND90 353 aa12.49□□□□□ -0.41
SMAD4-214ENST00000592186 GMCL1P1Q8NEA9 526 aa12.49□□□□□ -0.41
SMAD4-214ENST00000592186 NKX2-3Q8TAU0 364 aa12.49□□□□□ -0.41
SMAD4-214ENST00000592186 LPAR1Q92633 364 aa12.49□□□□□ -0.41
SMAD4-214ENST00000592186 BRF1Q92994 677 aa12.49□□□□□ -0.41
SMAD4-214ENST00000592186 OPTNQ96CV9 577 aa12.49□□□□□ -0.41
SMAD4-214ENST00000592186 ZNF274Q96GC6 653 aaPredicted RBP12.49□□□□□ -0.41
SMAD4-214ENST00000592186 MAP3K14Q99558 947 aa12.49□□□□□ -0.41
SMAD4-214ENST00000592186 FEZ1Q99689 392 aa12.49□□□□□ -0.41
SMAD4-214ENST00000592186 F5H6K3 240 aa12.48□□□□□ -0.41
SMAD4-214ENST00000592186 GTF2A2P52657 109 aa12.48□□□□□ -0.41
SMAD4-214ENST00000592186 KLRC3Q07444 240 aa12.48□□□□□ -0.41
SMAD4-214ENST00000592186 SHROOM1Q2M3G4 852 aaPredicted RBP12.48□□□□□ -0.41
SMAD4-214ENST00000592186 FASTKD5Q7L8L6 764 aaKnown RBP12.48□□□□□ -0.41
SMAD4-214ENST00000592186 OTUD5Q96G74 571 aa12.48□□□□□ -0.41
SMAD4-214ENST00000592186 WNK4Q96J92 1243 aa12.48□□□□□ -0.41
SMAD4-214ENST00000592186 ZSCAN31Q96LW9 406 aaPredicted RBP12.48□□□□□ -0.41
SMAD4-214ENST00000592186 TCEANC2Q96MN5 208 aa12.48□□□□□ -0.41
SMAD4-214ENST00000592186 LRRC2Q9BYS8 371 aa12.48□□□□□ -0.41
SMAD4-214ENST00000592186 TMOD4Q9NZQ9 345 aa12.48□□□□□ -0.41
SMAD4-214ENST00000592186 LIMCH1Q9UPQ0 1083 aa12.48□□□□□ -0.41
SMAD4-214ENST00000592186 KCNH4Q9UQ05 1017 aa12.48□□□□□ -0.41
SMAD4-214ENST00000592186 RBM19Q9Y4C8 960 aaKnown RBP12.48□□□□□ -0.41
SMAD4-214ENST00000592186 CCDC196A0A1B0GTZ2 297 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 A0A1W2PRG0 241 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 TRIM75PA6NK02 468 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 IRF6O14896 467 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 DDAH1O94760 285 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 KIF5BP33176 963 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 AK2P54819 239 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 INHBEP58166 350 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 SNAPC2Q13487 334 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 TOB2Q14106 344 aaPredicted RBP12.47□□□□□ -0.41
SMAD4-214ENST00000592186 DEFB115Q30KQ5 88 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 SH3D19Q5HYK7 790 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 SPRYD7Q5W111 196 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
SMAD4-214ENST00000592186 ZNF654Q8IZM8 581 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 DCAF4Q8WV16 495 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 GMCL1Q96IK5 515 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 VCPKMTQ9H867 229 aa12.47□□□□□ -0.41
SMAD4-214ENST00000592186 KLF18A0A0U1RQI7 1052 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 ZBTB43O43298 467 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 DHX16O60231 1041 aaKnown RBP12.46□□□□□ -0.41
SMAD4-214ENST00000592186 ABCB7O75027 752 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 CETPP11597 493 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 ECE1P42892 770 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 GNAQP50148 359 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 TROAPQ12815 778 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 MTMR2Q13614 643 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 COL9A3Q14050 684 aaPredicted RBP12.46□□□□□ -0.41
SMAD4-214ENST00000592186 SLFN13Q68D06 897 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 APOA5Q6Q788 366 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 CLEC10AQ8IUN9 316 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 FANCBQ8NB91 859 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 PROCA1Q8NCQ7 364 aaPredicted RBP12.46□□□□□ -0.41
SMAD4-214ENST00000592186 SNX21Q969T3 373 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 C12orf42Q96LP6 360 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 LZTS2Q9BRK4 669 aa12.46□□□□□ -0.41
SMAD4-214ENST00000592186 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
SMAD4-214ENST00000592186 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.46□□□□□ -0.41
SMAD4-214ENST00000592186 TRPM7Q96QT4 1865 aa12.45□□□□□ -0.42
SMAD4-214ENST00000592186 A0A0G2JLL6 359 aaPredicted RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 MANSC4A6NHS7 340 aaPredicted RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 RASSF10A6NK89 507 aa12.45□□□□□ -0.42
SMAD4-214ENST00000592186 WDR46O15213 610 aaKnown RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 RAD21O60216 631 aa12.45□□□□□ -0.42
SMAD4-214ENST00000592186 PARP1P09874 1014 aaKnown RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 APOBRQ0VD83 1088 aa12.45□□□□□ -0.42
SMAD4-214ENST00000592186 PABPC4Q13310 644 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 ASPRV1Q53RT3 343 aa12.45□□□□□ -0.42
SMAD4-214ENST00000592186 GPATCH4Q5T3I0 446 aaKnown RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 PRRT2Q7Z6L0 340 aaPredicted RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 LRRC47Q8N1G4 583 aaKnown RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 CTCFLQ8NI51 663 aaPredicted RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 SH2B1Q9NRF2 756 aaPredicted RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
SMAD4-214ENST00000592186 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.45□□□□□ -0.42
SMAD4-214ENST00000592186 BRPF3Q9ULD4 1205 aa12.45□□□□□ -0.42
SMAD4-214ENST00000592186 PLA2G6O60733 806 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 NDUFB10O96000 172 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 SLC10A3P09131 477 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 SNHG28P0DPA3 235 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 BMP3P12645 472 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 SMARCA1P28370 1054 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 SLC1A4P43007 532 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 HMGCS2P54868 508 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 C1QTNF8P60827 252 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 CCDC84Q86UT8 332 aaPredicted RBP12.44□□□□□ -0.42
SMAD4-214ENST00000592186 RASAL3Q86YV0 1011 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms