RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 DNAJC25Q9H1X3 360 aa9.83□□□□□ -0.84
VMP1-213ENST00000591877 NUP98P52948 1817 aa9.83□□□□□ -0.84
VMP1-213ENST00000591877 LDLRAD1Q5T700 205 aa9.82□□□□□ -0.84
VMP1-213ENST00000591877 TREML1Q86YW5 311 aa9.82□□□□□ -0.84
VMP1-213ENST00000591877 ZNF526Q8TF50 670 aaPredicted RBP9.82□□□□□ -0.84
VMP1-213ENST00000591877 MAPK8IP3Q9UPT6 1336 aa9.82□□□□□ -0.84
VMP1-213ENST00000591877 ARFGEF2Q9Y6D5 1785 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 ELOA3CA0A087WX78 387 aaPredicted RBP9.81□□□□□ -0.84
VMP1-213ENST00000591877 ELOA3DA6NLF2 546 aaPredicted RBP9.81□□□□□ -0.84
VMP1-213ENST00000591877 TGFBR3LH3BV60 316 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 ALAS2P22557 587 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 ERCC5P28715 1186 aaPredicted RBP9.81□□□□□ -0.84
VMP1-213ENST00000591877 GNA15P30679 374 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 TMPOP42166 694 aaKnown RBP9.81□□□□□ -0.84
VMP1-213ENST00000591877 PRELPP51888 382 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 RIPK4P57078 832 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 HDLBPQ00341 1268 aaKnown RBP9.81□□□□□ -0.84
VMP1-213ENST00000591877 ELOA3BQ3SY89 546 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 C2CD5Q86YS7 1000 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 ELOA3Q8NG57 546 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 PNISRQ8TF01 805 aaKnown RBP9.81□□□□□ -0.84
VMP1-213ENST00000591877 DRC1Q96MC2 740 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 CSRNP1Q96S65 589 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 PNNQ9H307 717 aaKnown RBP9.81□□□□□ -0.84
VMP1-213ENST00000591877 PRKRIP1Q9H875 184 aaPredicted RBP9.81□□□□□ -0.84
VMP1-213ENST00000591877 SLX4Q8IY92 1834 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 FER1L6Q2WGJ9 1857 aa9.81□□□□□ -0.84
VMP1-213ENST00000591877 SF3A1Q15459 793 aaKnown RBP9.8□□□□□ -0.84
VMP1-213ENST00000591877 GRIK4Q16099 956 aa9.8□□□□□ -0.84
VMP1-213ENST00000591877 HLFQ16534 295 aa9.8□□□□□ -0.84
VMP1-213ENST00000591877 C9orf131Q5VYM1 1079 aa9.8□□□□□ -0.84
VMP1-213ENST00000591877 CLEC4GQ6UXB4 293 aa9.8□□□□□ -0.84
VMP1-213ENST00000591877 CCDC146Q8IYE0 955 aa9.8□□□□□ -0.84
VMP1-213ENST00000591877 SETDB2Q96T68 719 aa9.8□□□□□ -0.84
VMP1-213ENST00000591877 BRIP1Q9BX63 1249 aa9.8□□□□□ -0.84
VMP1-213ENST00000591877 VTI1BQ9UEU0 232 aa9.8□□□□□ -0.84
VMP1-213ENST00000591877 RRP7AQ9Y3A4 280 aaKnown RBP9.8□□□□□ -0.84
VMP1-213ENST00000591877 H0YIN7 160 aa9.79□□□□□ -0.84
VMP1-213ENST00000591877 TXLNAP40222 546 aa9.79□□□□□ -0.84
VMP1-213ENST00000591877 TTLL6Q8N841 843 aa9.79□□□□□ -0.84
VMP1-213ENST00000591877 TTC16Q8NEE8 873 aa9.79□□□□□ -0.84
VMP1-213ENST00000591877 RHPN1Q8TCX5 695 aa9.79□□□□□ -0.84
VMP1-213ENST00000591877 C7orf43Q8WVR3 580 aa9.79□□□□□ -0.84
VMP1-213ENST00000591877 MARK1Q9P0L2 795 aa9.79□□□□□ -0.84
VMP1-213ENST00000591877 DICER1Q9UPY3 1922 aaKnown RBP9.78□□□□□ -0.84
VMP1-213ENST00000591877 TNRC6CQ9HCJ0 1690 aaKnown RBP9.78□□□□□ -0.84
VMP1-213ENST00000591877 MICAL2O94851 1124 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 PDE6BP35913 854 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 TRIM28Q13263 835 aaKnown RBP9.78□□□□□ -0.84
VMP1-213ENST00000591877 LRP8Q14114 963 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 NAALADL2Q58DX5 795 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 TTLL7Q6ZT98 887 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 C8orf86Q6ZUL3 223 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 LRP10Q7Z4F1 713 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 SYT9Q86SS6 491 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 NGEFQ8N5V2 710 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 CNBD1Q8NA66 436 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 TMEM87AQ8NBN3 555 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 GPR152Q8TDT2 470 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 PIK3R5Q8WYR1 880 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 RUNDC1Q96C34 613 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 ZIC5Q96T25 663 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 ANKIB1Q9P2G1 1089 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 TSPYL4Q9UJ04 414 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 GJA3Q9Y6H8 435 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 TIAM2Q8IVF5 1701 aa9.78□□□□□ -0.84
VMP1-213ENST00000591877 M0R082 166 aa9.77□□□□□ -0.85
VMP1-213ENST00000591877 NFKBIEO00221 500 aa9.77□□□□□ -0.85
VMP1-213ENST00000591877 HYAL3O43820 417 aaPredicted RBP9.77□□□□□ -0.85
VMP1-213ENST00000591877 FAM157BP0CG42 384 aa9.77□□□□□ -0.85
VMP1-213ENST00000591877 SRGNP10124 158 aa9.77□□□□□ -0.85
VMP1-213ENST00000591877 MYL6BP14649 208 aa9.77□□□□□ -0.85
VMP1-213ENST00000591877 ZNF417Q8TAU3 575 aa9.77□□□□□ -0.85
VMP1-213ENST00000591877 ZNF622Q969S3 477 aaKnown RBP eCLIP9.77□□□□□ -0.85
VMP1-213ENST00000591877 FAM161BQ96MY7 647 aa9.77□□□□□ -0.85
VMP1-213ENST00000591877 NACC1Q96RE7 527 aa9.77□□□□□ -0.85
VMP1-213ENST00000591877 ZNF587Q96SQ5 575 aaPredicted RBP9.77□□□□□ -0.85
VMP1-213ENST00000591877 NMRK2Q9NPI5 230 aa9.77□□□□□ -0.85
VMP1-213ENST00000591877 RNF181Q9P0P0 153 aa9.77□□□□□ -0.85
VMP1-213ENST00000591877 NIP7Q9Y221 180 aaKnown RBP eCLIP9.77□□□□□ -0.85
VMP1-213ENST00000591877 KRTAP4-8A0A0G2JLE6 195 aa9.76□□□□□ -0.85
VMP1-213ENST00000591877 KLRG2A4D1S0 409 aaPredicted RBP9.76□□□□□ -0.85
VMP1-213ENST00000591877 EIF1AYO14602 144 aaKnown RBP9.76□□□□□ -0.85
VMP1-213ENST00000591877 FANCCQ00597 558 aa9.76□□□□□ -0.85
VMP1-213ENST00000591877 COL9A3Q14050 684 aaPredicted RBP9.76□□□□□ -0.85
VMP1-213ENST00000591877 WDR43Q15061 677 aaKnown RBP eCLIP9.76□□□□□ -0.85
VMP1-213ENST00000591877 METTL16Q86W50 562 aaKnown RBP9.76□□□□□ -0.85
VMP1-213ENST00000591877 NBPF5PQ86XG9 351 aaPredicted RBP9.76□□□□□ -0.85
VMP1-213ENST00000591877 RNF34Q969K3 372 aa9.76□□□□□ -0.85
VMP1-213ENST00000591877 CRELD1Q96HD1 420 aa9.76□□□□□ -0.85
VMP1-213ENST00000591877 GOLGA2P5Q9HBQ8 144 aa9.76□□□□□ -0.85
VMP1-213ENST00000591877 BABAM1Q9NWV8 329 aa9.76□□□□□ -0.85
VMP1-213ENST00000591877 DMGDHQ9UI17 866 aaKnown RBP9.76□□□□□ -0.85
VMP1-213ENST00000591877 ZNF652Q9Y2D9 606 aa9.76□□□□□ -0.85
VMP1-213ENST00000591877 MAP3K15Q6ZN16 1313 aa9.76□□□□□ -0.85
VMP1-213ENST00000591877 ANKRD36CQ5JPF3 1778 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 FAM177BA6PVY3 158 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 ERVV-1B6SEH8 477 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 CHL1O00533 1208 aa9.75□□□□□ -0.85
VMP1-213ENST00000591877 GIPC1O14908 333 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms