RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 BAZ2AQ9UIF9 1905 aaKnown RBP12.43□□□□□ -0.42
SDF2-208ENST00000589788 USP17L5A8MUK1 530 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 BTBD19C9JJ37 291 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 SMAPO00193 183 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 PRKAB2O43741 272 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 FKTNO75072 461 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 GDF11O95390 407 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 CD46P15529 392 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 PSEN2P49810 448 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 PLCD1P51178 756 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 RRP1BQ14684 758 aaKnown RBP12.43□□□□□ -0.42
SDF2-208ENST00000589788 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
SDF2-208ENST00000589788 CCDC84Q86UT8 332 aaPredicted RBP12.43□□□□□ -0.42
SDF2-208ENST00000589788 PACS2Q86VP3 889 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 ZNF296Q8WUU4 475 aaPredicted RBP12.43□□□□□ -0.42
SDF2-208ENST00000589788 EVI5LQ96CN4 794 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 R3HDMLQ9H3Y0 253 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 AS3MTQ9HBK9 375 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 ZFYVE28Q9HCC9 887 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 GINM1Q9NU53 330 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.43□□□□□ -0.42
SDF2-208ENST00000589788 AFG3L2Q9Y4W6 797 aa12.43□□□□□ -0.42
SDF2-208ENST00000589788 ST18O60284 1047 aa12.42□□□□□ -0.42
SDF2-208ENST00000589788 CERKLQ49MI3 558 aaPredicted RBP12.42□□□□□ -0.42
SDF2-208ENST00000589788 VARS2Q5ST30 1063 aaKnown RBP12.42□□□□□ -0.42
SDF2-208ENST00000589788 GADL1Q6ZQY3 521 aa12.42□□□□□ -0.42
SDF2-208ENST00000589788 ANKRD23Q86SG2 305 aa12.42□□□□□ -0.42
SDF2-208ENST00000589788 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
SDF2-208ENST00000589788 OSBP2Q969R2 916 aa12.42□□□□□ -0.42
SDF2-208ENST00000589788 STRBPQ96SI9 672 aaKnown RBP12.42□□□□□ -0.42
SDF2-208ENST00000589788 PTPRFP10586 1907 aa12.42□□□□□ -0.42
SDF2-208ENST00000589788 A0A0G2JLL6 359 aaPredicted RBP12.41□□□□□ -0.42
SDF2-208ENST00000589788 USP17L12C9JPN9 530 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 USP17L21D6R901 530 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 PDHXO00330 501 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 GPAA1O43292 621 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 APPP05067 770 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 CYP2D6P10635 497 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 GNAT2P19087 354 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 SPP2Q13103 211 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 DGKZQ13574 1117 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 TATDN1Q6P1N9 297 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 PRRT2Q7Z6L0 340 aaPredicted RBP12.41□□□□□ -0.42
SDF2-208ENST00000589788 CTU1Q7Z7A3 348 aaKnown RBP12.41□□□□□ -0.42
SDF2-208ENST00000589788 CABP5Q9NP86 173 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 PPP4R2Q9NY27 417 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 ZBTB21Q9ULJ3 1066 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 MYH8P13535 1937 aa12.41□□□□□ -0.42
SDF2-208ENST00000589788 M0R2C6 588 aa12.4□□□□□ -0.42
SDF2-208ENST00000589788 GH2P01242 217 aa12.4□□□□□ -0.42
SDF2-208ENST00000589788 SHMT1P34896 483 aa12.4□□□□□ -0.42
SDF2-208ENST00000589788 ABCB5Q2M3G0 1257 aa12.4□□□□□ -0.42
SDF2-208ENST00000589788 ZMYM1Q5SVZ6 1142 aa12.4□□□□□ -0.42
SDF2-208ENST00000589788 PLEKHM2Q8IWE5 1019 aa12.4□□□□□ -0.42
SDF2-208ENST00000589788 PROCA1Q8NCQ7 364 aaPredicted RBP12.4□□□□□ -0.42
SDF2-208ENST00000589788 RILPL2Q969X0 211 aa12.4□□□□□ -0.42
SDF2-208ENST00000589788 WDR18Q9BV38 432 aa12.4□□□□□ -0.42
SDF2-208ENST00000589788 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.4□□□□□ -0.42
SDF2-208ENST00000589788 ARPP21Q9UBL0 812 aaPredicted RBP12.4□□□□□ -0.42
SDF2-208ENST00000589788 SWAP70Q9UH65 585 aa12.4□□□□□ -0.42
SDF2-208ENST00000589788 GSG1L2A8MUP6 293 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 TLR2O60603 784 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 TDO2P48775 406 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 HMGCS2P54868 508 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 JAG1P78504 1218 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 SP3Q02447 781 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 GABPAQ06546 454 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 MOGSQ13724 837 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 RAB3GAP1Q15042 981 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 SHROOM1Q2M3G4 852 aaPredicted RBP12.39□□□□□ -0.43
SDF2-208ENST00000589788 C12orf60Q5U649 245 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 GIMAP6Q6P9H5 292 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 CTR9Q6PD62 1173 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 ERO1AQ96HE7 468 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 SEC62Q99442 399 aaKnown RBP12.39□□□□□ -0.43
SDF2-208ENST00000589788 PARK7Q99497 189 aaKnown RBP12.39□□□□□ -0.43
SDF2-208ENST00000589788 NACAP1Q9BZK3 213 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 MCOLN1Q9GZU1 580 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 OSBPL3Q9H4L5 887 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 TMOD4Q9NZQ9 345 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 KIAA1468Q9P260 1216 aa12.39□□□□□ -0.43
SDF2-208ENST00000589788 CYP2D7A0A087X1C5 515 aa12.38□□□□□ -0.43
SDF2-208ENST00000589788 PATL2C9JE40 543 aaKnown RBP12.38□□□□□ -0.43
SDF2-208ENST00000589788 MPHOSPH10O00566 681 aaKnown RBP12.38□□□□□ -0.43
SDF2-208ENST00000589788 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.43
SDF2-208ENST00000589788 MTMR2Q13614 643 aa12.38□□□□□ -0.43
SDF2-208ENST00000589788 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
SDF2-208ENST00000589788 GPAT2Q6NUI2 795 aa12.38□□□□□ -0.43
SDF2-208ENST00000589788 TICAM2Q86XR7 235 aa12.38□□□□□ -0.43
SDF2-208ENST00000589788 SLC44A5Q8NCS7 719 aa12.38□□□□□ -0.43
SDF2-208ENST00000589788 DYNLL2Q96FJ2 89 aa12.38□□□□□ -0.43
SDF2-208ENST00000589788 FEZ1Q99689 392 aa12.38□□□□□ -0.43
SDF2-208ENST00000589788 AGTPBP1Q9UPW5 1226 aa12.38□□□□□ -0.43
SDF2-208ENST00000589788 SLC45A1Q9Y2W3 748 aa12.38□□□□□ -0.43
SDF2-208ENST00000589788 MINDY4BA8MYZ0 360 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 C19orf81C9J6K1 198 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 USP17L10C9JJH3 530 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 BACE1P56817 501 aa12.37□□□□□ -0.43
SDF2-208ENST00000589788 KIF22Q14807 665 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms