RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 PHIPQ8WWQ0 1821 aa19.85■□□□□ 0.77
SCAMP4-211ENST00000588907 BACE1P56817 501 aa19.84■□□□□ 0.77
SCAMP4-211ENST00000588907 COL9A3Q14050 684 aaPredicted RBP19.84■□□□□ 0.77
SCAMP4-211ENST00000588907 ZNF654Q8IZM8 581 aa19.84■□□□□ 0.77
SCAMP4-211ENST00000588907 SNX21Q969T3 373 aa19.84■□□□□ 0.77
SCAMP4-211ENST00000588907 OPTNQ96CV9 577 aa19.84■□□□□ 0.77
SCAMP4-211ENST00000588907 CLMNQ96JQ2 1002 aa19.84■□□□□ 0.77
SCAMP4-211ENST00000588907 ZSCAN31Q96LW9 406 aaPredicted RBP19.84■□□□□ 0.77
SCAMP4-211ENST00000588907 SH2B1Q9NRF2 756 aaPredicted RBP19.84■□□□□ 0.77
SCAMP4-211ENST00000588907 ABT1Q9ULW3 272 aaKnown RBP19.84■□□□□ 0.77
SCAMP4-211ENST00000588907 LIMCH1Q9UPQ0 1083 aa19.84■□□□□ 0.77
SCAMP4-211ENST00000588907 KLF18A0A0U1RQI7 1052 aa19.83■□□□□ 0.77
SCAMP4-211ENST00000588907 ZBTB43O43298 467 aa19.83■□□□□ 0.77
SCAMP4-211ENST00000588907 KIF5BP33176 963 aa19.83■□□□□ 0.77
SCAMP4-211ENST00000588907 APOA5Q6Q788 366 aa19.83■□□□□ 0.77
SCAMP4-211ENST00000588907 USP17L2Q6R6M4 530 aa19.83■□□□□ 0.77
SCAMP4-211ENST00000588907 SIAH1Q8IUQ4 282 aa19.83■□□□□ 0.77
SCAMP4-211ENST00000588907 OTUD5Q96G74 571 aa19.83■□□□□ 0.77
SCAMP4-211ENST00000588907 VCPKMTQ9H867 229 aa19.83■□□□□ 0.77
SCAMP4-211ENST00000588907 KCNH4Q9UQ05 1017 aa19.83■□□□□ 0.77
SCAMP4-211ENST00000588907 NID2Q14112 1375 aa19.83■□□□□ 0.76
SCAMP4-211ENST00000588907 CCDC196A0A1B0GTZ2 297 aa19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 SPP2Q13103 211 aa19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 RGMBQ6NW40 437 aa19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 CLEC10AQ8IUN9 316 aa19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 LRRC47Q8N1G4 583 aaKnown RBP19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 DCAF4Q8WV16 495 aa19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 CCDC102AQ96A19 550 aa19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 GMCL1Q96IK5 515 aa19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 WNK4Q96J92 1243 aa19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 C12orf42Q96LP6 360 aa19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 TMOD4Q9NZQ9 345 aa19.82■□□□□ 0.76
SCAMP4-211ENST00000588907 A0A1W2PRG0 241 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 TRIM75PA6NK02 468 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 GOLGA8BA8MQT2 603 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 DHX16O60231 1041 aaKnown RBP19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 ECE1P42892 770 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 ZNF157P51786 506 aaPredicted RBP19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 APOBRQ0VD83 1088 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 TROAPQ12815 778 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 SNAPC2Q13487 334 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 MTMR2Q13614 643 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 ASPRV1Q53RT3 343 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 SH3D19Q5HYK7 790 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 GPATCH4Q5T3I0 446 aaKnown RBP19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 HSCBQ8IWL3 235 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 CTCFLQ8NI51 663 aaPredicted RBP19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 ACER1Q8TDN7 264 aa19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 RBM28Q9NW13 759 aaKnown RBP19.81■□□□□ 0.76
SCAMP4-211ENST00000588907 F5H6K3 240 aa19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 IRF6O14896 467 aa19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 SNHG28P0DPA3 235 aa19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 ANP32AP39687 249 aaKnown RBP19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 GNAQP50148 359 aa19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 METAP2P50579 478 aaKnown RBP eCLIP19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 GTF2A2P52657 109 aa19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 KLRC3Q07444 240 aa19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 SLFN13Q68D06 897 aa19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 FASTKD5Q7L8L6 764 aaKnown RBP19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 PROCA1Q8NCQ7 364 aaPredicted RBP19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 GPHNQ9NQX3 736 aaPredicted RBP19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 NAP1L2Q9ULW6 460 aaPredicted RBP19.8■□□□□ 0.76
SCAMP4-211ENST00000588907 PTPRFP10586 1907 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 A0A0G2JLL6 359 aaPredicted RBP19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 WDR46O15213 610 aaKnown RBP19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 NDUFB10O96000 172 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 PARP1P09874 1014 aaKnown RBP19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 PDHBP11177 359 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 SLC1A4P43007 532 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 BECN1Q14457 450 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 SPRYD7Q5W111 196 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 PRRT2Q7Z6L0 340 aaPredicted RBP19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 MICU3Q86XE3 530 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 NUP133Q8WUM0 1156 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 LZTS2Q9BRK4 669 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 SLKQ9H2G2 1235 aaPredicted RBP19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 SENP2Q9HC62 589 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 BRPF3Q9ULD4 1205 aa19.79■□□□□ 0.76
SCAMP4-211ENST00000588907 LOC285556D6RIA3 1793 aa19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 GOLGA8AA7E2F4 631 aa19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 SLC10A3P09131 477 aa19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 CETPP11597 493 aa19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 PDIA3P30101 505 aaKnown RBP19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 GRM4Q14833 912 aa19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 RTN1Q16799 776 aa19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 CPLX2Q6PUV4 134 aaKnown RBP19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 CCDC84Q86UT8 332 aaPredicted RBP19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 RASAL3Q86YV0 1011 aa19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 FANCBQ8NB91 859 aa19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 TPCN1Q9ULQ1 816 aa19.78■□□□□ 0.76
SCAMP4-211ENST00000588907 RASSF10A6NK89 507 aa19.77■□□□□ 0.76
SCAMP4-211ENST00000588907 K7ELQ4 463 aaPredicted RBP19.77■□□□□ 0.76
SCAMP4-211ENST00000588907 RAD21O60216 631 aa19.77■□□□□ 0.76
SCAMP4-211ENST00000588907 PFKFB2O60825 505 aa19.77■□□□□ 0.76
SCAMP4-211ENST00000588907 BMP3P12645 472 aa19.77■□□□□ 0.76
SCAMP4-211ENST00000588907 HMGCS2P54868 508 aa19.77■□□□□ 0.76
SCAMP4-211ENST00000588907 PABPC4Q13310 644 aaKnown RBP eCLIP19.77■□□□□ 0.76
SCAMP4-211ENST00000588907 CNKSR2Q8WXI2 1034 aa19.77■□□□□ 0.76
SCAMP4-211ENST00000588907 TSHZ2Q9NRE2 1034 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms