RNA–Protein interactions for RNA: ENST00000586835.1

TMED1-202, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2

Gene TMED1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-202ENST00000586835 IFNL1Q8IU54 200 aa16.32■□□□□ 0.2
TMED1-202ENST00000586835 OTUD5Q96G74 571 aa16.32■□□□□ 0.2
TMED1-202ENST00000586835 MS4A4AQ96JQ5 239 aa16.32■□□□□ 0.2
TMED1-202ENST00000586835 MAP3K14Q99558 947 aa16.32■□□□□ 0.2
TMED1-202ENST00000586835 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
TMED1-202ENST00000586835 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
TMED1-202ENST00000586835 GREB1LQ9C091 1923 aaPredicted RBP16.31■□□□□ 0.2
TMED1-202ENST00000586835 CCDC196A0A1B0GTZ2 297 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 CCDC69A6NI79 296 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 TSPY2A6NKD2 308 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 LARGE1O95461 756 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 CALM1P0DP23 149 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 CALM2P0DP24 149 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 CALM3P0DP25 149 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 HMGN5P82970 282 aaKnown RBP16.31■□□□□ 0.2
TMED1-202ENST00000586835 PPATQ06203 517 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 PPIL2Q13356 520 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 ENAHQ8N8S7 591 aaPredicted RBP16.31■□□□□ 0.2
TMED1-202ENST00000586835 SMC3Q9UQE7 1217 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 SLC12A7Q9Y666 1083 aa16.31■□□□□ 0.2
TMED1-202ENST00000586835 TNKSO95271 1327 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 CASP8AP2Q9UKL3 1982 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 KLF18A0A0U1RQI7 1052 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 IGF2BP3O00425 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
TMED1-202ENST00000586835 IRF6O14896 467 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 DDAH1O94760 285 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 ALDH1A1P00352 501 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 TSPY3P0CV98 308 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 TSPY8P0CW00 308 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 PDCP20941 246 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 GTF2A2P52657 109 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 TFAP4Q01664 338 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 ST3GAL1Q11201 340 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 TATDN1Q6P1N9 297 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 CPLX2Q6PUV4 134 aaKnown RBP16.3■□□□□ 0.2
TMED1-202ENST00000586835 NOL8Q76FK4 1167 aaKnown RBP16.3■□□□□ 0.2
TMED1-202ENST00000586835 CCDC83Q8IWF9 413 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 SMARCC2Q8TAQ2 1214 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 NKX2-3Q8TAU0 364 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 DYNLL2Q96FJ2 89 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 PTPN18Q99952 460 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 CFHR5Q9BXR6 569 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.3■□□□□ 0.2
TMED1-202ENST00000586835 BRPF3Q9ULD4 1205 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 HPS5Q9UPZ3 1129 aa16.3■□□□□ 0.2
TMED1-202ENST00000586835 SMIM22K7EJ46 135 aa16.29■□□□□ 0.2
TMED1-202ENST00000586835 ZBTB43O43298 467 aa16.29■□□□□ 0.2
TMED1-202ENST00000586835 CTNND1O60716 968 aaKnown RBP16.29■□□□□ 0.2
TMED1-202ENST00000586835 CDKL5O76039 1030 aa16.29■□□□□ 0.2
TMED1-202ENST00000586835 TBC1D8O95759 1140 aa16.29■□□□□ 0.2
TMED1-202ENST00000586835 SCRN1Q12765 414 aa16.29■□□□□ 0.2
TMED1-202ENST00000586835 IFIT1BQ5T764 474 aaKnown RBP16.29■□□□□ 0.2
TMED1-202ENST00000586835 SCYL3Q8IZE3 742 aa16.29■□□□□ 0.2
TMED1-202ENST00000586835 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
TMED1-202ENST00000586835 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 FAM196BA6NMK8 535 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 GOLGA8BA8MQT2 603 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 PRDM1O75626 825 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 SHMT1P34896 483 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 CCL15Q16663 113 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 OTUD7BQ6GQQ9 843 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 NFXL1Q6ZNB6 911 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 CATIPQ7Z7H3 387 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 IL17RBQ9NRM6 502 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 GINM1Q9NU53 330 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 SYNPO2Q9UMS6 1093 aa16.28■□□□□ 0.2
TMED1-202ENST00000586835 IGKV6D-41A0A0C4DH26 115 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 CETPP11597 493 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 PTPRAP18433 802 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 METAP2P50579 478 aaKnown RBP eCLIP16.27■□□□□ 0.2
TMED1-202ENST00000586835 EVX2Q03828 476 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 SNAPC2Q13487 334 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 NOM1Q5C9Z4 860 aaKnown RBP16.27■□□□□ 0.2
TMED1-202ENST00000586835 RCSD1Q6JBY9 416 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 ZNF654Q8IZM8 581 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 CRACR2BQ8N4Y2 399 aaPredicted RBP16.27■□□□□ 0.2
TMED1-202ENST00000586835 NECAB1Q8N987 351 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 LARP6Q9BRS8 491 aaKnown RBP16.27■□□□□ 0.2
TMED1-202ENST00000586835 TRIM34Q9BYJ4 488 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 R3HDMLQ9H3Y0 253 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 GPHNQ9NQX3 736 aaPredicted RBP16.27■□□□□ 0.2
TMED1-202ENST00000586835 PICK1Q9NRD5 415 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 RBM28Q9NW13 759 aaKnown RBP16.27■□□□□ 0.2
TMED1-202ENST00000586835 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.2
TMED1-202ENST00000586835 TROAPQ12815 778 aa16.26■□□□□ 0.19
TMED1-202ENST00000586835 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
TMED1-202ENST00000586835 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
TMED1-202ENST00000586835 CLEC17AQ6ZS10 378 aa16.26■□□□□ 0.19
TMED1-202ENST00000586835 SPRYD3Q8NCJ5 442 aa16.26■□□□□ 0.19
TMED1-202ENST00000586835 SLC44A5Q8NCS7 719 aa16.26■□□□□ 0.19
TMED1-202ENST00000586835 ZHX2Q9Y6X8 837 aa16.26■□□□□ 0.19
TMED1-202ENST00000586835 STK36Q9NRP7 1315 aa16.25■□□□□ 0.19
TMED1-202ENST00000586835 DOCK1Q14185 1865 aa16.25■□□□□ 0.19
TMED1-202ENST00000586835 GPR25O00155 361 aa16.25■□□□□ 0.19
TMED1-202ENST00000586835 CXCL11O14625 94 aa16.25■□□□□ 0.19
TMED1-202ENST00000586835 TOP1P11387 765 aaKnown RBP16.25■□□□□ 0.19
TMED1-202ENST00000586835 CAP2P40123 477 aa16.25■□□□□ 0.19
TMED1-202ENST00000586835 RRP1BQ14684 758 aaKnown RBP16.25■□□□□ 0.19
TMED1-202ENST00000586835 STK11IPQ8N1F8 1099 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms