RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ICE2Q659A1 982 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 SLC6A19Q695T7 634 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 INTS5Q6P9B9 1019 aaKnown RBP7.36□□□□□ -1.23
SMAD4-203ENST00000585448 CENPQQ7L2Z9 268 aaPredicted RBP7.36□□□□□ -1.23
SMAD4-203ENST00000585448 KIAA0825Q8IV33 1275 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 MCATQ8IVS2 390 aaKnown RBP7.36□□□□□ -1.23
SMAD4-203ENST00000585448 SLITRK4Q8IW52 837 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 ZNF654Q8IZM8 581 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 REXO1Q8N1G1 1221 aaKnown RBP7.36□□□□□ -1.23
SMAD4-203ENST00000585448 OTUD6BQ8N6M0 293 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 MKNK2Q9HBH9 465 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 SSU72Q9NP77 194 aaKnown RBP7.36□□□□□ -1.23
SMAD4-203ENST00000585448 IGSF5Q9NSI5 407 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 ATG3Q9NT62 314 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 DONSONQ9NYP3 566 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 CHMP5Q9NZZ3 219 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 ZKSCAN5Q9Y2L8 839 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 KNSTRNQ9Y448 316 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 NCOA2Q15596 1464 aa7.36□□□□□ -1.23
SMAD4-203ENST00000585448 CNTLNQ9NXG0 1405 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 CFAP65Q6ZU64 1925 aaKnown RBP7.35□□□□□ -1.23
SMAD4-203ENST00000585448 ATE1O95260 518 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 CST3P01034 146 aaPredicted RBP7.35□□□□□ -1.23
SMAD4-203ENST00000585448 CAPN2P17655 700 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 GUCY2CP25092 1073 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 NASPP49321 788 aaPredicted RBP7.35□□□□□ -1.23
SMAD4-203ENST00000585448 RACK1P63244 317 aaKnown RBP7.35□□□□□ -1.23
SMAD4-203ENST00000585448 ZNF394Q53GI3 561 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 ARMCX6Q7L4S7 300 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 SPATA32Q96LK8 384 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 SPON2Q9BUD6 331 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 DUSP23Q9BVJ7 150 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 OSBPL1AQ9BXW6 950 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 FOXQ1Q9C009 403 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 TGIF2Q9GZN2 237 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 FBRSQ9HAH7 460 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 PIM2Q9P1W9 311 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 CCDC39Q9UFE4 941 aa7.35□□□□□ -1.23
SMAD4-203ENST00000585448 FEZ2Q9UHY8 353 aaPredicted RBP7.35□□□□□ -1.23
SMAD4-203ENST00000585448 KIAA1324LA8MWY0 1029 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-203ENST00000585448 GOLGA6L6A8MZA4 724 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 WDR64B1ANS9 1081 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 PGRP06401 933 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 FOSL1P15407 271 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 TCF3P15923 654 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 NOP2P46087 812 aaKnown RBP7.34□□□□□ -1.23
SMAD4-203ENST00000585448 CRKP46108 304 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 CD97P48960 835 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 SYCP1Q15431 976 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 DUSP27Q5VZP5 1158 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 UBE3DQ7Z6J8 389 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 RPAINQ86UA6 219 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 NT5DC4Q86YG4 428 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 SLFN12Q8IYM2 578 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 EXOC6Q8TAG9 804 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 RASGRP4Q8TDF6 673 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 ZNF428Q96B54 188 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 EHMT1Q9H9B1 1298 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 MED4Q9NPJ6 270 aa7.34□□□□□ -1.23
SMAD4-203ENST00000585448 POLR3KQ9Y2Y1 108 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-203ENST00000585448 FAM170BA6NMN3 283 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 IGF2BP3O00425 579 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMAD4-203ENST00000585448 COBLO75128 1261 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 ZNF853P0CG23 659 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 GRIK1P39086 918 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 RAD51AP2Q09MP3 1159 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 TRDNQ13061 729 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 CDK5R2Q13319 367 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 COL9A2Q14055 689 aaPredicted RBP7.33□□□□□ -1.24
SMAD4-203ENST00000585448 NKG7Q16617 165 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 ZNF765Q7L2R6 523 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 FAM214BQ7L5A3 538 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 FAM9BQ8IZU0 186 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 ACSF2Q96CM8 615 aaPredicted RBP7.33□□□□□ -1.24
SMAD4-203ENST00000585448 EAF1Q96JC9 268 aaPredicted RBP7.33□□□□□ -1.24
SMAD4-203ENST00000585448 COX4I2Q96KJ9 171 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 FAM210AQ96ND0 272 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 PRDM16Q9HAZ2 1276 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 TJP2Q9UDY2 1190 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 LEMD3Q9Y2U8 911 aa7.33□□□□□ -1.24
SMAD4-203ENST00000585448 ERICH3Q5RHP9 1530 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 GOLGA6L22H0YM25 854 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 TGFB1P01137 390 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 FAM87AP0C7U9 286 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 GJA8P48165 433 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 TDO2P48775 406 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 APOBRQ0VD83 1088 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 MSMPQ1L6U9 139 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 CT47A1Q5JQC4 288 aaPredicted RBP7.32□□□□□ -1.24
SMAD4-203ENST00000585448 ZMYM1Q5SVZ6 1142 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 C22orf34Q6ZV56 151 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 SHISA5Q8N114 240 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 FBXL6Q8N531 539 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 FBXO27Q8NI29 283 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 PDLIM2Q96JY6 352 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 TMEM87BQ96K49 555 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 PRKRIP1Q9H875 184 aaPredicted RBP7.32□□□□□ -1.24
SMAD4-203ENST00000585448 PCDHGB7Q9Y5F8 929 aa7.32□□□□□ -1.24
SMAD4-203ENST00000585448 DHX16O60231 1041 aaKnown RBP7.31□□□□□ -1.24
SMAD4-203ENST00000585448 HTR3BO95264 441 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms