RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 POTEIP0CG38 1075 aa16.9■□□□□ 0.3
MKS1-211ENST00000581761 POTEJP0CG39 1038 aa16.9■□□□□ 0.3
MKS1-211ENST00000581761 LIG1P18858 919 aa16.9■□□□□ 0.3
MKS1-211ENST00000581761 GNAQP50148 359 aa16.9■□□□□ 0.3
MKS1-211ENST00000581761 TNIP1Q15025 636 aa16.9■□□□□ 0.3
MKS1-211ENST00000581761 SRBD1Q8N5C6 995 aaKnown RBP16.9■□□□□ 0.3
MKS1-211ENST00000581761 TAF1DQ9H5J8 278 aaPredicted RBP16.9■□□□□ 0.3
MKS1-211ENST00000581761 SERPINB13Q9UIV8 391 aa16.9■□□□□ 0.3
MKS1-211ENST00000581761 CLIC4Q9Y696 253 aa16.9■□□□□ 0.3
MKS1-211ENST00000581761 V9GY48 417 aaPredicted RBP16.9■□□□□ 0.3
MKS1-211ENST00000581761 PLIN4Q96Q06 1357 aa16.89■□□□□ 0.3
MKS1-211ENST00000581761 PSME4Q14997 1843 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 hCG_1642624A0A1W2PR95 340 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 IQCA1LA6NCM1 817 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 YEATS4O95619 227 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 XRCC6P12956 609 aaKnown RBP eCLIP16.89■□□□□ 0.29
MKS1-211ENST00000581761 AKR1B1P15121 316 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 U2AF2P26368 475 aaKnown RBP eCLIP16.89■□□□□ 0.29
MKS1-211ENST00000581761 NASPP49321 788 aaPredicted RBP16.89■□□□□ 0.29
MKS1-211ENST00000581761 CACNB3P54284 484 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 SF3A1Q15459 793 aaKnown RBP16.89■□□□□ 0.29
MKS1-211ENST00000581761 PKN1Q16512 942 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 ANO1Q5XXA6 986 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 DIS3L2Q8IYB7 885 aaKnown RBP16.89■□□□□ 0.29
MKS1-211ENST00000581761 IDI2Q9BXS1 227 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 POLR3EQ9NVU0 708 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 GPRC5DQ9NZD1 345 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 HACL1Q9UJ83 578 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 MYH6P13533 1939 aa16.89■□□□□ 0.29
MKS1-211ENST00000581761 TOP1P11387 765 aaKnown RBP16.88■□□□□ 0.29
MKS1-211ENST00000581761 ME1P48163 572 aa16.88■□□□□ 0.29
MKS1-211ENST00000581761 ZFPM1Q8IX07 1006 aa16.88■□□□□ 0.29
MKS1-211ENST00000581761 KCNG4Q8TDN1 519 aa16.88■□□□□ 0.29
MKS1-211ENST00000581761 EHD4Q9H223 541 aa16.88■□□□□ 0.29
MKS1-211ENST00000581761 TSPY26PQ9H489 355 aa16.88■□□□□ 0.29
MKS1-211ENST00000581761 VPS54Q9P1Q0 977 aa16.88■□□□□ 0.29
MKS1-211ENST00000581761 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
MKS1-211ENST00000581761 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
MKS1-211ENST00000581761 MTMR7Q9Y216 660 aa16.88■□□□□ 0.29
MKS1-211ENST00000581761 BTBD18B2RXH4 712 aa16.87■□□□□ 0.29
MKS1-211ENST00000581761 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
MKS1-211ENST00000581761 SHMT1P34896 483 aa16.87■□□□□ 0.29
MKS1-211ENST00000581761 EPHX2P34913 555 aa16.87■□□□□ 0.29
MKS1-211ENST00000581761 TCP10Q12799 353 aa16.87■□□□□ 0.29
MKS1-211ENST00000581761 NOSTRINQ8IVI9 506 aa16.87■□□□□ 0.29
MKS1-211ENST00000581761 CCAR1Q8IX12 1150 aaKnown RBP16.87■□□□□ 0.29
MKS1-211ENST00000581761 LINC00301Q8NCQ3 95 aa16.87■□□□□ 0.29
MKS1-211ENST00000581761 CEP95Q96GE4 821 aa16.87■□□□□ 0.29
MKS1-211ENST00000581761 GMLQ99445 158 aa16.87■□□□□ 0.29
MKS1-211ENST00000581761 NUP62CLQ9H1M0 184 aa16.87■□□□□ 0.29
MKS1-211ENST00000581761 DHX36Q9H2U1 1008 aaKnown RBP16.87■□□□□ 0.29
MKS1-211ENST00000581761 FOXP1Q9H334 677 aaPredicted RBP16.87■□□□□ 0.29
MKS1-211ENST00000581761 DDX19AQ9NUU7 478 aaKnown RBP16.87■□□□□ 0.29
MKS1-211ENST00000581761 MAD2L2Q9UI95 211 aa16.87■□□□□ 0.29
MKS1-211ENST00000581761 PCNTO95613 3336 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 SPTLC2O15270 562 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 KRT2P35908 639 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 HTRA3P83110 453 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 STAG2Q8N3U4 1231 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 PIBF1Q8WXW3 757 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 DPF2Q92785 391 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 TRIM34Q9BYJ4 488 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 TDRD3Q9H7E2 651 aaKnown RBP16.86■□□□□ 0.29
MKS1-211ENST00000581761 BRMS1Q9HCU9 246 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 DACT1Q9NYF0 836 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 TMOD2Q9NZR1 351 aa16.86■□□□□ 0.29
MKS1-211ENST00000581761 IGKV6D-41A0A0C4DH26 115 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 PARP1P09874 1014 aaKnown RBP16.85■□□□□ 0.29
MKS1-211ENST00000581761 SCG2P13521 617 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 NOVP48745 357 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 HIRAP54198 1017 aaPredicted RBP16.85■□□□□ 0.29
MKS1-211ENST00000581761 PFKFB3Q16875 520 aaPredicted RBP16.85■□□□□ 0.29
MKS1-211ENST00000581761 EAPPQ56P03 285 aaPredicted RBP16.85■□□□□ 0.29
MKS1-211ENST00000581761 CCDC73Q6ZRK6 1079 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
MKS1-211ENST00000581761 FSIP1Q8NA03 581 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 SHISA4Q96DD7 197 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 PHF20Q9BVI0 1012 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 RBSNQ9H1K0 784 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 CLSTN2Q9H4D0 955 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 CNOT7Q9UIV1 285 aaKnown RBP16.85■□□□□ 0.29
MKS1-211ENST00000581761 PCDHA7Q9UN72 937 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 MYH8P13535 1937 aa16.85■□□□□ 0.29
MKS1-211ENST00000581761 SCN4AP35499 1836 aa16.84■□□□□ 0.29
MKS1-211ENST00000581761 PALM3A6NDB9 673 aaPredicted RBP16.84■□□□□ 0.29
MKS1-211ENST00000581761 DDTLA6NHG4 134 aaPredicted RBP16.84■□□□□ 0.29
MKS1-211ENST00000581761 MPHOSPH10O00566 681 aaKnown RBP16.84■□□□□ 0.29
MKS1-211ENST00000581761 ENTPD3O75355 529 aa16.84■□□□□ 0.29
MKS1-211ENST00000581761 EGFRP00533 1210 aa16.84■□□□□ 0.29
MKS1-211ENST00000581761 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
MKS1-211ENST00000581761 SLC39A14Q15043 492 aa16.84■□□□□ 0.29
MKS1-211ENST00000581761 CHADLQ6NUI6 762 aa16.84■□□□□ 0.29
MKS1-211ENST00000581761 SH3BP5LQ7L8J4 393 aa16.84■□□□□ 0.29
MKS1-211ENST00000581761 MICALL2Q8IY33 904 aa16.84■□□□□ 0.29
MKS1-211ENST00000581761 OXER1Q8TDS5 423 aa16.84■□□□□ 0.29
MKS1-211ENST00000581761 PRMT6Q96LA8 375 aaPredicted RBP16.84■□□□□ 0.29
MKS1-211ENST00000581761 MTMR4Q9NYA4 1195 aa16.84■□□□□ 0.29
MKS1-211ENST00000581761 PI4KBQ9UBF8 816 aa16.84■□□□□ 0.29
MKS1-211ENST00000581761 A0A1W2PQ27 194 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms