RNA–Protein interactions for RNA: ENST00000577828.5

LINC00511-204, long intergenic non-protein coding RNA 511, humanhuman

TSL 3 BASIC

Gene LINC00511, Length 538 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-204ENST00000577828 ATP2B2Q01814 1243 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 PPIL2Q13356 520 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 RCSD1Q6JBY9 416 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 PNMA1Q8ND90 353 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 GMCL1P1Q8NEA9 526 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 LPAR1Q92633 364 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 BRF1Q92994 677 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 ZSCAN31Q96LW9 406 aaPredicted RBP11.91□□□□□ -0.5
LINC00511-204ENST00000577828 MAP3K14Q99558 947 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 TMEM47Q9BQJ4 181 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 KIAA1683Q9H0B3 1180 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 ELP3Q9H9T3 547 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
LINC00511-204ENST00000577828 CLIP2Q9UDT6 1046 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 LIMCH1Q9UPQ0 1083 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 TMX2Q9Y320 296 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 ZHX2Q9Y6X8 837 aa11.91□□□□□ -0.5
LINC00511-204ENST00000577828 OTOFQ9HC10 1997 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 KLF18A0A0U1RQI7 1052 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 CCDC196A0A1B0GTZ2 297 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 GOLGA8BA8MQT2 603 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 USP17L10C9JJH3 530 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 CXCL11O14625 94 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 ZBTB43O43298 467 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 DHX16O60231 1041 aaKnown RBP11.9□□□□□ -0.5
LINC00511-204ENST00000577828 ZBTB48P10074 688 aaPredicted RBP11.9□□□□□ -0.5
LINC00511-204ENST00000577828 KIF5BP33176 963 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 JAG1P78504 1218 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 TOB2Q14106 344 aaPredicted RBP11.9□□□□□ -0.5
LINC00511-204ENST00000577828 BECN1Q14457 450 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 SAPCD2Q86UD0 394 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 HSCBQ8IWL3 235 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 ZNF654Q8IZM8 581 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 DCAF4Q8WV16 495 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 SNX21Q969T3 373 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 OPTNQ96CV9 577 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 ZNF274Q96GC6 653 aaPredicted RBP11.9□□□□□ -0.5
LINC00511-204ENST00000577828 TCEANC2Q96MN5 208 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 LRRC2Q9BYS8 371 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 FZD1Q9UP38 647 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 NID2Q14112 1375 aa11.9□□□□□ -0.5
LINC00511-204ENST00000577828 HSPA8P11142 646 aaKnown RBP11.89□□□□□ -0.51
LINC00511-204ENST00000577828 GNAQP50148 359 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 BACE1P56817 501 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 FMR1Q06787 632 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC00511-204ENST00000577828 SHROOM1Q2M3G4 852 aaPredicted RBP11.89□□□□□ -0.51
LINC00511-204ENST00000577828 CYP4F22Q6NT55 531 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 APOA5Q6Q788 366 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 USP17L2Q6R6M4 530 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 MOB2Q70IA6 237 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 LRRC47Q8N1G4 583 aaKnown RBP11.89□□□□□ -0.51
LINC00511-204ENST00000577828 CTCFLQ8NI51 663 aaPredicted RBP11.89□□□□□ -0.51
LINC00511-204ENST00000577828 NKX2-3Q8TAU0 364 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 CCDC102AQ96A19 550 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 OTUD5Q96G74 571 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 GMCL1Q96IK5 515 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 CLMNQ96JQ2 1002 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 VCPKMTQ9H867 229 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 RBM28Q9NW13 759 aaKnown RBP11.89□□□□□ -0.51
LINC00511-204ENST00000577828 TMOD4Q9NZQ9 345 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 AFG3L2Q9Y4W6 797 aa11.89□□□□□ -0.51
LINC00511-204ENST00000577828 TRIM75PA6NK02 468 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 F5H6K3 240 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 METAP2P50579 478 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00511-204ENST00000577828 KLRC3Q07444 240 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 APOBRQ0VD83 1088 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 TROAPQ12815 778 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 SPP2Q13103 211 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 GRM1Q13255 1194 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 SNAPC2Q13487 334 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 MTMR2Q13614 643 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 COL9A3Q14050 684 aaPredicted RBP11.88□□□□□ -0.51
LINC00511-204ENST00000577828 ASPRV1Q53RT3 343 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 GPATCH4Q5T3I0 446 aaKnown RBP11.88□□□□□ -0.51
LINC00511-204ENST00000577828 RGMBQ6NW40 437 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 CPLX2Q6PUV4 134 aaKnown RBP11.88□□□□□ -0.51
LINC00511-204ENST00000577828 FASTKD5Q7L8L6 764 aaKnown RBP11.88□□□□□ -0.51
LINC00511-204ENST00000577828 CLEC10AQ8IUN9 316 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 SIAH1Q8IUQ4 282 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 WNK4Q96J92 1243 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 C12orf42Q96LP6 360 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 LZTS2Q9BRK4 669 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 NAP1L2Q9ULW6 460 aaPredicted RBP11.88□□□□□ -0.51
LINC00511-204ENST00000577828 KCNH4Q9UQ05 1017 aa11.88□□□□□ -0.51
LINC00511-204ENST00000577828 A0A0G2JLL6 359 aaPredicted RBP11.87□□□□□ -0.51
LINC00511-204ENST00000577828 A0A1W2PRG0 241 aa11.87□□□□□ -0.51
LINC00511-204ENST00000577828 GOLGA8AA7E2F4 631 aa11.87□□□□□ -0.51
LINC00511-204ENST00000577828 WDR46O15213 610 aaKnown RBP11.87□□□□□ -0.51
LINC00511-204ENST00000577828 CDKL5O76039 1030 aa11.87□□□□□ -0.51
LINC00511-204ENST00000577828 NDUFB10O96000 172 aa11.87□□□□□ -0.51
LINC00511-204ENST00000577828 PARP1P09874 1014 aaKnown RBP11.87□□□□□ -0.51
LINC00511-204ENST00000577828 SNHG28P0DPA3 235 aa11.87□□□□□ -0.51
LINC00511-204ENST00000577828 PDIA3P30101 505 aaKnown RBP11.87□□□□□ -0.51
LINC00511-204ENST00000577828 SLC1A4P43007 532 aa11.87□□□□□ -0.51
LINC00511-204ENST00000577828 ZNF157P51786 506 aaPredicted RBP11.87□□□□□ -0.51
LINC00511-204ENST00000577828 GTF2A2P52657 109 aa11.87□□□□□ -0.51
LINC00511-204ENST00000577828 PABPC4Q13310 644 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINC00511-204ENST00000577828 RTN1Q16799 776 aa11.87□□□□□ -0.51
LINC00511-204ENST00000577828 SH3D19Q5HYK7 790 aa11.87□□□□□ -0.51
LINC00511-204ENST00000577828 SLFN13Q68D06 897 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms