RNA–Protein interactions for RNA: ENST00000576582.5

CALCOCO2-228, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-228ENST00000576582 ATP11BQ9Y2G3 1177 aa13.02□□□□□ -0.33
CALCOCO2-228ENST00000576582 NOP58Q9Y2X3 529 aaKnown RBP13.02□□□□□ -0.33
CALCOCO2-228ENST00000576582 SEPT4O43236 478 aa13.01□□□□□ -0.33
CALCOCO2-228ENST00000576582 IDH1O75874 414 aaKnown RBP13.01□□□□□ -0.33
CALCOCO2-228ENST00000576582 MAP3K12Q12852 859 aa13.01□□□□□ -0.33
CALCOCO2-228ENST00000576582 SNX17Q15036 470 aa13.01□□□□□ -0.33
CALCOCO2-228ENST00000576582 ABRAQ8N0Z2 381 aa13.01□□□□□ -0.33
CALCOCO2-228ENST00000576582 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
CALCOCO2-228ENST00000576582 MB21D1Q8N884 522 aa13.01□□□□□ -0.33
CALCOCO2-228ENST00000576582 MIGA1Q8NAN2 632 aa13.01□□□□□ -0.33
CALCOCO2-228ENST00000576582 ADORA2AP29274 412 aa13□□□□□ -0.33
CALCOCO2-228ENST00000576582 SHMT1P34896 483 aa13□□□□□ -0.33
CALCOCO2-228ENST00000576582 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
CALCOCO2-228ENST00000576582 MAGEB6Q8N7X4 407 aa13□□□□□ -0.33
CALCOCO2-228ENST00000576582 MAFAQ8NHW3 353 aaPredicted RBP13□□□□□ -0.33
CALCOCO2-228ENST00000576582 FRAT1Q92837 279 aaPredicted RBP13□□□□□ -0.33
CALCOCO2-228ENST00000576582 CLUAP1Q96AJ1 413 aa13□□□□□ -0.33
CALCOCO2-228ENST00000576582 MOV10L1Q9BXT6 1211 aaKnown RBP13□□□□□ -0.33
CALCOCO2-228ENST00000576582 MROH8Q9H579 483 aa13□□□□□ -0.33
CALCOCO2-228ENST00000576582 DBNLQ9UJU6 430 aaKnown RBP13□□□□□ -0.33
CALCOCO2-228ENST00000576582 MYH1P12882 1939 aa13□□□□□ -0.33
CALCOCO2-228ENST00000576582 VCANP13611 3396 aa12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 ERCC3P19447 782 aa12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 GUCY1A2P33402 732 aa12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 PLCD1P51178 756 aa12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 C9orf50Q5SZB4 431 aa12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 SYMPKQ92797 1274 aaKnown RBP12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 BADQ92934 168 aa12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 SPATC1LQ9H0A9 340 aa12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 PRDM5Q9NQX1 630 aaPredicted RBP12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 NRBP1Q9UHY1 535 aa12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 TACC3Q9Y6A5 838 aa12.99□□□□□ -0.33
CALCOCO2-228ENST00000576582 TMEM265A0A087WTH1 108 aa12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 COBLO75128 1261 aa12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 ADCYAP1R1P41586 468 aa12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 GABPAQ06546 454 aa12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 SEPT2Q15019 361 aa12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 LRRC41Q15345 812 aa12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 TRIM60Q495X7 471 aa12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 EAF2Q96CJ1 260 aaPredicted RBP12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 CCDC8Q9H0W5 538 aaPredicted RBP12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 PDLIM7Q9NR12 457 aa12.98□□□□□ -0.33
CALCOCO2-228ENST00000576582 A0A1W2PRG0 241 aa12.97□□□□□ -0.33
CALCOCO2-228ENST00000576582 TRIM43BA6NCK2 446 aa12.97□□□□□ -0.33
CALCOCO2-228ENST00000576582 DSG3P32926 999 aa12.97□□□□□ -0.33
CALCOCO2-228ENST00000576582 TRIM43Q96BQ3 446 aaPredicted RBP12.97□□□□□ -0.33
CALCOCO2-228ENST00000576582 RIOK1Q9BRS2 568 aaKnown RBP12.97□□□□□ -0.33
CALCOCO2-228ENST00000576582 TANGO6Q9C0B7 1094 aa12.97□□□□□ -0.33
CALCOCO2-228ENST00000576582 PRDM6Q9NQX0 595 aa12.97□□□□□ -0.33
CALCOCO2-228ENST00000576582 TLR7Q9NYK1 1049 aaKnown RBP12.97□□□□□ -0.33
CALCOCO2-228ENST00000576582 PHF24Q9UPV7 400 aa12.97□□□□□ -0.33
CALCOCO2-228ENST00000576582 FRMPD3Q5JV73 1810 aa12.97□□□□□ -0.33
CALCOCO2-228ENST00000576582 ZBED9Q6R2W3 1325 aa12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 MAGEB6P1A0A0J9YX57 407 aa12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 MPHOSPH10O00566 681 aaKnown RBP12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 SLC25A27O95847 323 aa12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 FCER1AP12319 257 aa12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 TLE2Q04725 743 aa12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 TTF1Q15361 905 aaPredicted RBP12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 TMEM179Q6ZVK1 233 aa12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 SH3RF1Q7Z6J0 888 aa12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 MAML3Q96JK9 1138 aa12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 TTYH1Q9H313 450 aaPredicted RBP12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 MCM9Q9NXL9 1143 aa12.96□□□□□ -0.33
CALCOCO2-228ENST00000576582 RLFQ13129 1914 aa12.96□□□□□ -0.34
CALCOCO2-228ENST00000576582 RARBP10826 455 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 FOSL2P15408 326 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 PLS1Q14651 629 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 ANO1Q5XXA6 986 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 RNF180Q86T96 592 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 NCAPG2Q86XI2 1143 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 ERC1Q8IUD2 1116 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 MYLIPQ8WY64 445 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 ANTXR1Q9H6X2 564 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 SH2D4AQ9H788 454 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 XPNPEP3Q9NQH7 507 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 SWAP70Q9UH65 585 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 DIS3Q9Y2L1 958 aaKnown RBP12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 ZNF236Q9UL36 1845 aa12.95□□□□□ -0.34
CALCOCO2-228ENST00000576582 SPTBN5Q9NRC6 3674 aaKnown RBP12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 PRUNE2Q8WUY3 3088 aa12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 KIAA0355O15063 1070 aa12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 FLOT1O75955 427 aa12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 CLTBP09497 229 aa12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 SLC9C2Q5TAH2 1124 aa12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 RNPC3Q96LT9 517 aaKnown RBP12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 C1orf115Q9H7X2 142 aa12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 ARHGEF10LQ9HCE6 1279 aa12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 TMX2Q9Y320 296 aa12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 LTBP2Q14767 1821 aa12.94□□□□□ -0.34
CALCOCO2-228ENST00000576582 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.93□□□□□ -0.34
CALCOCO2-228ENST00000576582 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.93□□□□□ -0.34
CALCOCO2-228ENST00000576582 RLBP1P12271 317 aa12.93□□□□□ -0.34
CALCOCO2-228ENST00000576582 RAG1P15918 1043 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms