RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 APPP05067 770 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 ZFYP08048 801 aaPredicted RBP14.25□□□□□ -0.13
LITAF-219ENST00000576334 SBK1Q52WX2 424 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 MORN1Q5T089 497 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 WDR78Q5VTH9 848 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 UBE2Q1Q7Z7E8 422 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 AMOTL1Q8IY63 956 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 USP6NLQ92738 828 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 PAK6Q9NQU5 681 aaPredicted RBP14.25□□□□□ -0.13
LITAF-219ENST00000576334 FBXO28Q9NVF7 368 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 ARPP21Q9UBL0 812 aaPredicted RBP14.25□□□□□ -0.13
LITAF-219ENST00000576334 TMX2Q9Y320 296 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 RABGAP1Q9Y3P9 1069 aa14.25□□□□□ -0.13
LITAF-219ENST00000576334 PATL2C9JE40 543 aaKnown RBP14.24□□□□□ -0.13
LITAF-219ENST00000576334 HMGCRP04035 888 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 MAPK4P31152 587 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 TDO2P48775 406 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 PDE1AP54750 535 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 ZMYM1Q5SVZ6 1142 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 PLEKHH3Q7Z736 793 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 CCAR1Q8IX12 1150 aaKnown RBP14.24□□□□□ -0.13
LITAF-219ENST00000576334 IFNL3Q8IZI9 196 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 DIS3LQ8TF46 1054 aaKnown RBP14.24□□□□□ -0.13
LITAF-219ENST00000576334 ATG4CQ96DT6 458 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 CCDC17Q96LX7 622 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 NUDT12Q9BQG2 462 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.24□□□□□ -0.133e-7■■□□□ 13.1
LITAF-219ENST00000576334 VCPKMTQ9H867 229 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 ARHGEF10LQ9HCE6 1279 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 INCENPQ9NQS7 918 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 FLRT1Q9NZU1 646 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 COL11A1P12107 1806 aaPredicted RBP14.24□□□□□ -0.13
LITAF-219ENST00000576334 A0A0G2JMZ2 1700 aa14.24□□□□□ -0.13
LITAF-219ENST00000576334 RAD21O60216 631 aa14.23□□□□□ -0.13
LITAF-219ENST00000576334 TFRCP02786 760 aaKnown RBP14.23□□□□□ -0.13
LITAF-219ENST00000576334 IRX6P78412 446 aaPredicted RBP14.23□□□□□ -0.13
LITAF-219ENST00000576334 COG2Q14746 738 aa14.23□□□□□ -0.13
LITAF-219ENST00000576334 VPS53Q5VIR6 699 aa14.23□□□□□ -0.13
LITAF-219ENST00000576334 LBX2Q6XYB7 198 aa14.23□□□□□ -0.13
LITAF-219ENST00000576334 GCC1Q96CN9 775 aa14.23□□□□□ -0.13
LITAF-219ENST00000576334 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
LITAF-219ENST00000576334 STAP2Q9UGK3 403 aa14.23□□□□□ -0.13
LITAF-219ENST00000576334 SUPT16HQ9Y5B9 1047 aaKnown RBP14.23□□□□□ -0.13
LITAF-219ENST00000576334 TACC3Q9Y6A5 838 aa14.23□□□□□ -0.13
LITAF-219ENST00000576334 DNAH12Q6ZR08 3092 aa14.23□□□□□ -0.13
LITAF-219ENST00000576334 ROBO3Q96MS0 1386 aa14.22□□□□□ -0.13
LITAF-219ENST00000576334 FLOT1O75955 427 aa14.22□□□□□ -0.13
LITAF-219ENST00000576334 FARP2O94887 1054 aaPredicted RBP14.22□□□□□ -0.13
LITAF-219ENST00000576334 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
LITAF-219ENST00000576334 CACNB2Q08289 660 aaPredicted RBP14.22□□□□□ -0.13
LITAF-219ENST00000576334 GIMAP6Q6P9H5 292 aa14.22□□□□□ -0.13
LITAF-219ENST00000576334 NPLOC4Q8TAT6 608 aa14.22□□□□□ -0.13
LITAF-219ENST00000576334 NKX2-3Q8TAU0 364 aa14.22□□□□□ -0.13
LITAF-219ENST00000576334 GTF3C2Q8WUA4 911 aaPredicted RBP14.22□□□□□ -0.13
LITAF-219ENST00000576334 CHMP4CQ96CF2 233 aa14.22□□□□□ -0.13
LITAF-219ENST00000576334 FAM227BQ96M60 508 aa14.22□□□□□ -0.13
LITAF-219ENST00000576334 MOV10L1Q9BXT6 1211 aaKnown RBP14.22□□□□□ -0.13
LITAF-219ENST00000576334 KANSL2Q9H9L4 492 aa14.22□□□□□ -0.13
LITAF-219ENST00000576334 MKNK2Q9HBH9 465 aa14.22□□□□□ -0.13
LITAF-219ENST00000576334 CWC22Q9HCG8 908 aaKnown RBP14.22□□□□□ -0.13
LITAF-219ENST00000576334 PCDH10Q9P2E7 1040 aa14.22□□□□□ -0.13
LITAF-219ENST00000576334 ZBTB47Q9UFB7 747 aaPredicted RBP14.22□□□□□ -0.13
LITAF-219ENST00000576334 H0YGN5 161 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 PTPREP23469 700 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 CCND3P30281 292 aaPredicted RBP14.21□□□□□ -0.13
LITAF-219ENST00000576334 DSG3P32926 999 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 CTDSPL2Q05D32 466 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 MAP2K5Q13163 448 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 PLS1Q14651 629 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 FAM47AQ5JRC9 791 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 FAM83BQ5T0W9 1011 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 SMC5Q8IY18 1101 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 SOCS4Q8WXH5 440 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 DPF3Q92784 378 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 HMX1Q9NP08 348 aaPredicted RBP14.21□□□□□ -0.13
LITAF-219ENST00000576334 CEP290O15078 2479 aa14.21□□□□□ -0.13
LITAF-219ENST00000576334 ALPK3Q96L96 1907 aa14.21□□□□□ -0.14
LITAF-219ENST00000576334 MYH4Q9Y623 1939 aa14.21□□□□□ -0.14
LITAF-219ENST00000576334 RPTORQ8N122 1335 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 RANBP2P49792 3224 aaKnown RBP14.2□□□□□ -0.14
LITAF-219ENST00000576334 IGKV6D-41A0A0C4DH26 115 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 A0A0D9SFI3 127 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 XRCC5P13010 732 aaKnown RBP14.2□□□□□ -0.14
LITAF-219ENST00000576334 ZKSCAN1P17029 563 aaPredicted RBP14.2□□□□□ -0.14
LITAF-219ENST00000576334 GNAT2P19087 354 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 ERCC3P19447 782 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 RGS2P41220 211 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 MNX1P50219 401 aaPredicted RBP14.2□□□□□ -0.14
LITAF-219ENST00000576334 MAP3K21Q5TCX8 1036 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 LPAR1Q92633 364 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 PAWRQ96IZ0 340 aaKnown RBP14.2□□□□□ -0.14
LITAF-219ENST00000576334 SPATC1LQ9H0A9 340 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 HOXC10Q9NYD6 342 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 CLIP2Q9UDT6 1046 aa14.2□□□□□ -0.14
LITAF-219ENST00000576334 SLC15A5A6NIM6 579 aa14.19□□□□□ -0.14
LITAF-219ENST00000576334 WDR46O15213 610 aaKnown RBP14.19□□□□□ -0.14
LITAF-219ENST00000576334 CCNA1P78396 465 aa14.19□□□□□ -0.14
LITAF-219ENST00000576334 PPARAQ07869 468 aa14.19□□□□□ -0.14
LITAF-219ENST00000576334 GRB14Q14449 540 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms