RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 DGKHQ86XP1 1220 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 DNAJC5GQ8N7S2 189 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 PROCA1Q8NCQ7 364 aaPredicted RBP17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 MKL1Q969V6 931 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 BACH2Q9BYV9 841 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 VCPKMTQ9H867 229 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 KAT14Q9H8E8 782 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 EMILIN3Q9NT22 766 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 ISY1Q9ULR0 285 aaKnown RBP17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 MTMR7Q9Y216 660 aa17.05■□□□□ 0.32
NPLOC4-209ENST00000572760 TESPA1A2RU30 521 aaPredicted RBP17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 CASTP20810 708 aaKnown RBP17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 TM4SF4P48230 202 aa17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 ANAPC15P60006 121 aa17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 PABPC4Q13310 644 aaKnown RBP eCLIP17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 DGKZQ13574 1117 aa17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 TMEM87BQ96K49 555 aa17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 TMEM47Q9BQJ4 181 aa17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 BEGAINQ9BUH8 593 aa17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 C22orf23Q9BZE7 217 aa17.04■□□□□ 0.32
NPLOC4-209ENST00000572760 THSD7BQ9C0I4 1608 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 BTBD19C9JJ37 291 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 F5H6K3 240 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 ANTXR2P58335 489 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 MAP2K1Q02750 393 aaPredicted RBP17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 KLRC3Q07444 240 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 SLFN13Q68D06 897 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 IFNL1Q8IU54 200 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 SPICE1Q8N0Z3 855 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 ENAHQ8N8S7 591 aaPredicted RBP17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 LPAR1Q92633 364 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 CHMP4CQ96CF2 233 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 C12orf42Q96LP6 360 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 MTA3Q9BTC8 594 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 SYNPO2Q9UMS6 1093 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 AGTPBP1Q9UPW5 1226 aa17.03■□□□□ 0.32
NPLOC4-209ENST00000572760 ALDH1A1P00352 501 aa17.02■□□□□ 0.32
NPLOC4-209ENST00000572760 OSBPP22059 807 aa17.02■□□□□ 0.32
NPLOC4-209ENST00000572760 RCSD1Q6JBY9 416 aa17.02■□□□□ 0.32
NPLOC4-209ENST00000572760 NFXL1Q6ZNB6 911 aa17.02■□□□□ 0.32
NPLOC4-209ENST00000572760 ANKRD23Q86SG2 305 aa17.02■□□□□ 0.32
NPLOC4-209ENST00000572760 TCEANC2Q96MN5 208 aa17.02■□□□□ 0.32
NPLOC4-209ENST00000572760 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.32
NPLOC4-209ENST00000572760 TM6SF1Q9BZW5 370 aa17.02■□□□□ 0.32
NPLOC4-209ENST00000572760 PNMA3Q9UL41 463 aa17.02■□□□□ 0.32
NPLOC4-209ENST00000572760 CYP46A1Q9Y6A2 500 aa17.02■□□□□ 0.32
NPLOC4-209ENST00000572760 WDR19Q8NEZ3 1342 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 PDHXO00330 501 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 IGF2BP3O00425 579 aaKnown RBP eCLIP17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 WDR46O15213 610 aaKnown RBP17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 NDUFB10O96000 172 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 CPA1P15085 419 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 VCAM1P19320 739 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 NOVP48745 357 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 IRX3P78415 501 aaPredicted RBP17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 MOGSQ13724 837 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 SEC23AQ15436 765 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 TAF1CQ15572 869 aaPredicted RBP17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 TREML2Q5T2D2 321 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 FAM43AQ8N2R8 423 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 TMTC2Q8N394 836 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 PNMA1Q8ND90 353 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 GMCL1P1Q8NEA9 526 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 ANKS1AQ92625 1134 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 PTPN18Q99952 460 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 TANGO6Q9C0B7 1094 aa17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 RPAP3Q9H6T3 665 aaPredicted RBP17.01■□□□□ 0.31
NPLOC4-209ENST00000572760 MYH6P13533 1939 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 CCDC69A6NI79 296 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 USP17L15C9J2P7 530 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 USP17L13C9JLJ4 530 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 USP17L11C9JVI0 530 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 USP17L18D6R9N7 530 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 USP17L22D6RA61 530 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 USP17L17D6RBQ6 530 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 USP17L19D6RCP7 530 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 USP17L20D6RJB6 530 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 SLC1A4P43007 532 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 USP17L24Q0WX57 530 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 CCDC96Q2M329 555 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 GPAT2Q6NUI2 795 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 SAMD1Q6SPF0 538 aaPredicted RBP17■□□□□ 0.31
NPLOC4-209ENST00000572760 RUFY3Q7L099 469 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 IGDCC4Q8TDY8 1250 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 ZSWIM6Q9HCJ5 1215 aa17■□□□□ 0.31
NPLOC4-209ENST00000572760 ZCCHC17Q9NP64 241 aaKnown RBP17■□□□□ 0.31
NPLOC4-209ENST00000572760 SH2B2O14492 632 aaPredicted RBP16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 BMP3P12645 472 aa16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 EXOSC10Q01780 885 aaKnown RBP16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 KIAA1755Q5JYT7 1200 aa16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 FAM83BQ5T0W9 1011 aa16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 SYNE3Q6ZMZ3 975 aa16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 Q6ZUG5 572 aa16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 CATIPQ7Z7H3 387 aa16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 PARK7Q99497 189 aaKnown RBP16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 UPF3BQ9BZI7 483 aaKnown RBP16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
NPLOC4-209ENST00000572760 SLC45A1Q9Y2W3 748 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms