RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 KIAA1755Q5JYT7 1200 aa20.81■□□□□ 0.92
LITAF-211ENST00000572255 WDR78Q5VTH9 848 aa20.81■□□□□ 0.92
LITAF-211ENST00000572255 APBA2Q99767 749 aa20.81■□□□□ 0.92
LITAF-211ENST00000572255 TANGO6Q9C0B7 1094 aa20.81■□□□□ 0.92
LITAF-211ENST00000572255 A0A0G2JMZ2 1700 aa20.81■□□□□ 0.92
LITAF-211ENST00000572255 RNF113AO15541 343 aaKnown RBP20.8■□□□□ 0.92
LITAF-211ENST00000572255 COG2Q14746 738 aa20.8■□□□□ 0.92
LITAF-211ENST00000572255 CCL14Q16627 93 aa20.8■□□□□ 0.92
LITAF-211ENST00000572255 APPBP2Q92624 585 aa20.8■□□□□ 0.92
LITAF-211ENST00000572255 LPAR1Q92633 364 aa20.8■□□□□ 0.92
LITAF-211ENST00000572255 OSBP2Q969R2 916 aa20.8■□□□□ 0.92
LITAF-211ENST00000572255 PAWRQ96IZ0 340 aaKnown RBP20.8■□□□□ 0.92
LITAF-211ENST00000572255 SH2D4AQ9H788 454 aa20.8■□□□□ 0.92
LITAF-211ENST00000572255 ARPP21Q9UBL0 812 aaPredicted RBP20.8■□□□□ 0.92
LITAF-211ENST00000572255 COLQQ9Y215 455 aaPredicted RBP20.8■□□□□ 0.92
LITAF-211ENST00000572255 TMX2Q9Y320 296 aa20.8■□□□□ 0.92
LITAF-211ENST00000572255 ZFYP08048 801 aaPredicted RBP20.79■□□□□ 0.92
LITAF-211ENST00000572255 MAP2K5Q13163 448 aa20.79■□□□□ 0.92
LITAF-211ENST00000572255 ANKLE1Q8NAG6 615 aa20.79■□□□□ 0.92
LITAF-211ENST00000572255 HOXC10Q9NYD6 342 aa20.79■□□□□ 0.92
LITAF-211ENST00000572255 TTC41PQ6P2S7 1318 aa20.78■□□□□ 0.92
LITAF-211ENST00000572255 SLC15A5A6NIM6 579 aa20.78■□□□□ 0.92
LITAF-211ENST00000572255 GSG1L2A8MUP6 293 aa20.78■□□□□ 0.92
LITAF-211ENST00000572255 PTPREP23469 700 aa20.78■□□□□ 0.92
LITAF-211ENST00000572255 CACNB2Q08289 660 aaPredicted RBP20.78■□□□□ 0.92
LITAF-211ENST00000572255 GIMAP6Q6P9H5 292 aa20.78■□□□□ 0.92
LITAF-211ENST00000572255 SPICE1Q8N0Z3 855 aa20.78■□□□□ 0.92
LITAF-211ENST00000572255 DIS3LQ8TF46 1054 aaKnown RBP20.78■□□□□ 0.92
LITAF-211ENST00000572255 VCPKMTQ9H867 229 aa20.78■□□□□ 0.92
LITAF-211ENST00000572255 NR2E3Q9Y5X4 410 aa20.78■□□□□ 0.92
LITAF-211ENST00000572255 IVNS1ABPQ9Y6Y0 642 aa20.78■□□□□ 0.92
LITAF-211ENST00000572255 ALPK3Q96L96 1907 aa20.77■□□□□ 0.92
LITAF-211ENST00000572255 TRIOBPQ9H2D6 2365 aa20.77■□□□□ 0.92
LITAF-211ENST00000572255 PARP14Q460N5 1801 aa20.77■□□□□ 0.92
LITAF-211ENST00000572255 ATP2B2Q01814 1243 aa20.77■□□□□ 0.92
LITAF-211ENST00000572255 SBK1Q52WX2 424 aa20.77■□□□□ 0.92
LITAF-211ENST00000572255 NECAB2Q7Z6G3 386 aa20.77■□□□□ 0.92
LITAF-211ENST00000572255 PI4K2BQ8TCG2 481 aa20.77■□□□□ 0.92
LITAF-211ENST00000572255 OTUD7AQ8TE49 926 aaPredicted RBP20.77■□□□□ 0.92
LITAF-211ENST00000572255 KANSL2Q9H9L4 492 aa20.77■□□□□ 0.92
LITAF-211ENST00000572255 GREB1LQ9C091 1923 aaPredicted RBP20.76■□□□□ 0.91
LITAF-211ENST00000572255 M0R2C6 588 aa20.76■□□□□ 0.91
LITAF-211ENST00000572255 ERC2O15083 957 aa20.76■□□□□ 0.91
LITAF-211ENST00000572255 GPAA1O43292 621 aa20.76■□□□□ 0.91
LITAF-211ENST00000572255 EEF2P13639 858 aaKnown RBP20.76■□□□□ 0.91
LITAF-211ENST00000572255 DSG3P32926 999 aa20.76■□□□□ 0.91
LITAF-211ENST00000572255 GRB14Q14449 540 aa20.76■□□□□ 0.91
LITAF-211ENST00000572255 CRBNQ96SW2 442 aa20.76■□□□□ 0.91
LITAF-211ENST00000572255 MOV10L1Q9BXT6 1211 aaKnown RBP20.76■□□□□ 0.91
LITAF-211ENST00000572255 SPATC1LQ9H0A9 340 aa20.76■□□□□ 0.91
LITAF-211ENST00000572255 OGDHLQ9ULD0 1010 aa20.76■□□□□ 0.91
LITAF-211ENST00000572255 ROBO3Q96MS0 1386 aa20.75■□□□□ 0.91
LITAF-211ENST00000572255 MINDY4BA8MYZ0 360 aa20.75■□□□□ 0.91
LITAF-211ENST00000572255 WDR46O15213 610 aaKnown RBP20.75■□□□□ 0.91
LITAF-211ENST00000572255 FLOT1O75955 427 aa20.75■□□□□ 0.91
LITAF-211ENST00000572255 LRRFIP1Q32MZ4 808 aaKnown RBP20.75■□□□□ 0.91
LITAF-211ENST00000572255 CHRDL2Q6WN34 429 aa20.75■□□□□ 0.91
LITAF-211ENST00000572255 MB21D1Q8N884 522 aa20.75■□□□□ 0.91
LITAF-211ENST00000572255 ZNF236Q9UL36 1845 aa20.75■□□□□ 0.91
LITAF-211ENST00000572255 EVI5O60447 810 aa20.74■□□□□ 0.91
LITAF-211ENST00000572255 HOXC6P09630 235 aa20.74■□□□□ 0.91
LITAF-211ENST00000572255 GNAT2P19087 354 aa20.74■□□□□ 0.91
LITAF-211ENST00000572255 RASA1P20936 1047 aa20.74■□□□□ 0.91
LITAF-211ENST00000572255 CCND3P30281 292 aaPredicted RBP20.74■□□□□ 0.91
LITAF-211ENST00000572255 MNX1P50219 401 aaPredicted RBP20.74■□□□□ 0.91
LITAF-211ENST00000572255 MFSD14CQ5VZR4 134 aa20.74■□□□□ 0.91
LITAF-211ENST00000572255 STK11IPQ8N1F8 1099 aa20.74■□□□□ 0.91
LITAF-211ENST00000572255 ATG4CQ96DT6 458 aa20.74■□□□□ 0.91
LITAF-211ENST00000572255 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.74■□□□□ 0.91
LITAF-211ENST00000572255 NBPF3Q9H094 633 aa20.74■□□□□ 0.91
LITAF-211ENST00000572255 EPB41L4AQ9HCS5 686 aaPredicted RBP20.74■□□□□ 0.91
LITAF-211ENST00000572255 FLRT1Q9NZU1 646 aa20.74■□□□□ 0.91
LITAF-211ENST00000572255 MX1P20591 662 aa20.73■□□□□ 0.91
LITAF-211ENST00000572255 TDO2P48775 406 aa20.73■□□□□ 0.91
LITAF-211ENST00000572255 SAMD1Q6SPF0 538 aaPredicted RBP20.73■□□□□ 0.91
LITAF-211ENST00000572255 SHCBP1Q8NEM2 672 aa20.73■□□□□ 0.91
LITAF-211ENST00000572255 NPLOC4Q8TAT6 608 aa20.73■□□□□ 0.91
LITAF-211ENST00000572255 FSD1Q9BTV5 496 aa20.73■□□□□ 0.91
LITAF-211ENST00000572255 MKNK2Q9HBH9 465 aa20.73■□□□□ 0.91
LITAF-211ENST00000572255 GOPCQ9HD26 462 aa20.73■□□□□ 0.91
LITAF-211ENST00000572255 RANBP2P49792 3224 aaKnown RBP20.72■□□□□ 0.91
LITAF-211ENST00000572255 COL11A1P12107 1806 aaPredicted RBP20.72■□□□□ 0.91
LITAF-211ENST00000572255 FRMPD3Q5JV73 1810 aa20.72■□□□□ 0.91
LITAF-211ENST00000572255 APPP05067 770 aa20.72■□□□□ 0.91
LITAF-211ENST00000572255 ERCC3P19447 782 aa20.72■□□□□ 0.91
LITAF-211ENST00000572255 FXR1P51114 621 aaKnown RBP eCLIP20.72■□□□□ 0.91
LITAF-211ENST00000572255 PLS1Q14651 629 aa20.72■□□□□ 0.91
LITAF-211ENST00000572255 STRNO43815 780 aa20.71■□□□□ 0.91
LITAF-211ENST00000572255 ADORA2AP29274 412 aa20.71■□□□□ 0.91
LITAF-211ENST00000572255 LHX8Q68G74 356 aa20.71■□□□□ 0.91
LITAF-211ENST00000572255 YTHDC1Q96MU7 727 aaKnown RBP20.71■□□□□ 0.91
LITAF-211ENST00000572255 SEC62Q99442 399 aaKnown RBP20.71■□□□□ 0.91
LITAF-211ENST00000572255 MROH8Q9H579 483 aa20.71■□□□□ 0.91
LITAF-211ENST00000572255 C11orf49Q9H6J7 331 aa20.71■□□□□ 0.91
LITAF-211ENST00000572255 FBXO28Q9NVF7 368 aa20.71■□□□□ 0.91
LITAF-211ENST00000572255 ZBTB47Q9UFB7 747 aaPredicted RBP20.71■□□□□ 0.91
LITAF-211ENST00000572255 SALL3Q9BXA9 1300 aa20.71■□□□□ 0.91
LITAF-211ENST00000572255 PATL2C9JE40 543 aaKnown RBP20.7■□□□□ 0.9
LITAF-211ENST00000572255 RAD21O60216 631 aa20.7■□□□□ 0.9
LITAF-211ENST00000572255 ANKRD45Q5TZF3 282 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms