RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 OTUD7AQ8TE49 926 aaPredicted RBP22.32■■□□□ 1.16
CPNE7-209ENST00000568977 CRBNQ96SW2 442 aa22.32■■□□□ 1.16
CPNE7-209ENST00000568977 APBA2Q99767 749 aa22.32■■□□□ 1.16
CPNE7-209ENST00000568977 H0YGN5 161 aa22.31■■□□□ 1.16
CPNE7-209ENST00000568977 RNF113AO15541 343 aaKnown RBP22.31■■□□□ 1.16
CPNE7-209ENST00000568977 ZFYP08048 801 aaPredicted RBP22.31■■□□□ 1.16
CPNE7-209ENST00000568977 PRKAR2AP13861 404 aaKnown RBP22.31■■□□□ 1.16
CPNE7-209ENST00000568977 KIAA1755Q5JYT7 1200 aa22.31■■□□□ 1.16
CPNE7-209ENST00000568977 MAP3K21Q5TCX8 1036 aa22.31■■□□□ 1.16
CPNE7-209ENST00000568977 WDR78Q5VTH9 848 aa22.31■■□□□ 1.16
CPNE7-209ENST00000568977 SIAH1Q8IUQ4 282 aa22.31■■□□□ 1.16
CPNE7-209ENST00000568977 PI4K2BQ8TCG2 481 aa22.31■■□□□ 1.16
CPNE7-209ENST00000568977 LPAR1Q92633 364 aa22.31■■□□□ 1.16
CPNE7-209ENST00000568977 DPF3Q92784 378 aa22.31■■□□□ 1.16
CPNE7-209ENST00000568977 SH2D4AQ9H788 454 aa22.31■■□□□ 1.16
CPNE7-209ENST00000568977 TMX2Q9Y320 296 aa22.31■■□□□ 1.16
CPNE7-209ENST00000568977 ROBO3Q96MS0 1386 aa22.3■■□□□ 1.16
CPNE7-209ENST00000568977 ZNF236Q9UL36 1845 aa22.3■■□□□ 1.16
CPNE7-209ENST00000568977 GSG1L2A8MUP6 293 aa22.3■■□□□ 1.16
CPNE7-209ENST00000568977 ERC2O15083 957 aa22.3■■□□□ 1.16
CPNE7-209ENST00000568977 GPAA1O43292 621 aa22.3■■□□□ 1.16
CPNE7-209ENST00000568977 MAP2K5Q13163 448 aa22.3■■□□□ 1.16
CPNE7-209ENST00000568977 TRMT44Q8IYL2 757 aaKnown RBP22.3■■□□□ 1.16
CPNE7-209ENST00000568977 VCPKMTQ9H867 229 aa22.3■■□□□ 1.16
CPNE7-209ENST00000568977 ALPK3Q96L96 1907 aa22.29■■□□□ 1.16
CPNE7-209ENST00000568977 M0R2C6 588 aa22.29■■□□□ 1.16
CPNE7-209ENST00000568977 GLRX3O76003 335 aaKnown RBP22.29■■□□□ 1.16
CPNE7-209ENST00000568977 COG2Q14746 738 aa22.29■■□□□ 1.16
CPNE7-209ENST00000568977 CCL14Q16627 93 aa22.29■■□□□ 1.16
CPNE7-209ENST00000568977 SBK1Q52WX2 424 aa22.29■■□□□ 1.16
CPNE7-209ENST00000568977 HABP4Q5JVS0 413 aaKnown RBP22.29■■□□□ 1.16
CPNE7-209ENST00000568977 SPICE1Q8N0Z3 855 aa22.29■■□□□ 1.16
CPNE7-209ENST00000568977 YTHDC1Q96MU7 727 aaKnown RBP22.29■■□□□ 1.16
CPNE7-209ENST00000568977 EPB41L4AQ9HCS5 686 aaPredicted RBP22.29■■□□□ 1.16
CPNE7-209ENST00000568977 MX1P20591 662 aa22.28■■□□□ 1.16
CPNE7-209ENST00000568977 LRRFIP1Q32MZ4 808 aaKnown RBP22.28■■□□□ 1.16
CPNE7-209ENST00000568977 GIMAP6Q6P9H5 292 aa22.28■■□□□ 1.16
CPNE7-209ENST00000568977 IVNS1ABPQ9Y6Y0 642 aa22.28■■□□□ 1.16
CPNE7-209ENST00000568977 FRMPD3Q5JV73 1810 aa22.28■■□□□ 1.16
CPNE7-209ENST00000568977 WDR46O15213 610 aaKnown RBP22.27■■□□□ 1.16
CPNE7-209ENST00000568977 FLOT1O75955 427 aa22.27■■□□□ 1.16
CPNE7-209ENST00000568977 EEF2P13639 858 aaKnown RBP22.27■■□□□ 1.16
CPNE7-209ENST00000568977 PTPREP23469 700 aa22.27■■□□□ 1.16
CPNE7-209ENST00000568977 ATP2B2Q01814 1243 aa22.27■■□□□ 1.16
CPNE7-209ENST00000568977 ANKLE1Q8NAG6 615 aa22.27■■□□□ 1.16
CPNE7-209ENST00000568977 DIS3LQ8TF46 1054 aaKnown RBP22.27■■□□□ 1.16
CPNE7-209ENST00000568977 PAWRQ96IZ0 340 aaKnown RBP22.27■■□□□ 1.16
CPNE7-209ENST00000568977 KANSL2Q9H9L4 492 aa22.27■■□□□ 1.16
CPNE7-209ENST00000568977 HOXC10Q9NYD6 342 aa22.27■■□□□ 1.16
CPNE7-209ENST00000568977 COL11A1P12107 1806 aaPredicted RBP22.27■■□□□ 1.15
CPNE7-209ENST00000568977 SLC15A5A6NIM6 579 aa22.26■■□□□ 1.15
CPNE7-209ENST00000568977 GNAT2P19087 354 aa22.26■■□□□ 1.15
CPNE7-209ENST00000568977 CACNB2Q08289 660 aaPredicted RBP22.26■■□□□ 1.15
CPNE7-209ENST00000568977 GRB14Q14449 540 aa22.26■■□□□ 1.15
CPNE7-209ENST00000568977 STK11IPQ8N1F8 1099 aa22.26■■□□□ 1.15
CPNE7-209ENST00000568977 FSD1Q9BTV5 496 aa22.26■■□□□ 1.15
CPNE7-209ENST00000568977 MOV10L1Q9BXT6 1211 aaKnown RBP22.26■■□□□ 1.15
CPNE7-209ENST00000568977 COLQQ9Y215 455 aaPredicted RBP22.26■■□□□ 1.15
CPNE7-209ENST00000568977 SALL3Q9BXA9 1300 aa22.26■■□□□ 1.15
CPNE7-209ENST00000568977 MINDY4BA8MYZ0 360 aa22.25■■□□□ 1.15
CPNE7-209ENST00000568977 RASA1P20936 1047 aa22.25■■□□□ 1.15
CPNE7-209ENST00000568977 DSG3P32926 999 aa22.25■■□□□ 1.15
CPNE7-209ENST00000568977 TDO2P48775 406 aa22.25■■□□□ 1.15
CPNE7-209ENST00000568977 NECAB2Q7Z6G3 386 aa22.25■■□□□ 1.15
CPNE7-209ENST00000568977 MB21D1Q8N884 522 aa22.25■■□□□ 1.15
CPNE7-209ENST00000568977 ATG4CQ96DT6 458 aa22.25■■□□□ 1.15
CPNE7-209ENST00000568977 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.25■■□□□ 1.15
CPNE7-209ENST00000568977 SPATC1LQ9H0A9 340 aa22.25■■□□□ 1.15
CPNE7-209ENST00000568977 TRIOBPQ9H2D6 2365 aa22.24■■□□□ 1.15
CPNE7-209ENST00000568977 MYH4Q9Y623 1939 aa22.24■■□□□ 1.15
CPNE7-209ENST00000568977 CCND3P30281 292 aaPredicted RBP22.24■■□□□ 1.15
CPNE7-209ENST00000568977 SEC62Q99442 399 aaKnown RBP22.24■■□□□ 1.15
CPNE7-209ENST00000568977 MKNK2Q9HBH9 465 aa22.24■■□□□ 1.15
CPNE7-209ENST00000568977 GOPCQ9HD26 462 aa22.24■■□□□ 1.15
CPNE7-209ENST00000568977 FLRT1Q9NZU1 646 aa22.24■■□□□ 1.15
CPNE7-209ENST00000568977 ZBTB47Q9UFB7 747 aaPredicted RBP22.24■■□□□ 1.15
CPNE7-209ENST00000568977 OGDHLQ9ULD0 1010 aa22.24■■□□□ 1.15
CPNE7-209ENST00000568977 NR2E3Q9Y5X4 410 aa22.24■■□□□ 1.15
CPNE7-209ENST00000568977 APPP05067 770 aa22.23■■□□□ 1.15
CPNE7-209ENST00000568977 HOXC6P09630 235 aa22.23■■□□□ 1.15
CPNE7-209ENST00000568977 ANKRD45Q5TZF3 282 aa22.23■■□□□ 1.15
CPNE7-209ENST00000568977 SAMD1Q6SPF0 538 aaPredicted RBP22.23■■□□□ 1.15
CPNE7-209ENST00000568977 SHCBP1Q8NEM2 672 aa22.23■■□□□ 1.15
CPNE7-209ENST00000568977 EVI5O60447 810 aa22.22■■□□□ 1.15
CPNE7-209ENST00000568977 ERCC3P19447 782 aa22.22■■□□□ 1.15
CPNE7-209ENST00000568977 MNX1P50219 401 aaPredicted RBP22.22■■□□□ 1.15
CPNE7-209ENST00000568977 HDAC1Q13547 482 aaPredicted RBP22.22■■□□□ 1.15
CPNE7-209ENST00000568977 PLS1Q14651 629 aa22.22■■□□□ 1.15
CPNE7-209ENST00000568977 ZMYM1Q5SVZ6 1142 aa22.22■■□□□ 1.15
CPNE7-209ENST00000568977 MFSD14CQ5VZR4 134 aa22.22■■□□□ 1.15
CPNE7-209ENST00000568977 CHRDL2Q6WN34 429 aa22.22■■□□□ 1.15
CPNE7-209ENST00000568977 IFNL3Q8IZI9 196 aa22.22■■□□□ 1.15
CPNE7-209ENST00000568977 NPLOC4Q8TAT6 608 aa22.22■■□□□ 1.15
CPNE7-209ENST00000568977 RAD21O60216 631 aa22.21■■□□□ 1.15
CPNE7-209ENST00000568977 ADORA2AP29274 412 aa22.21■■□□□ 1.15
CPNE7-209ENST00000568977 NBPF3Q9H094 633 aa22.21■■□□□ 1.15
CPNE7-209ENST00000568977 FBXO28Q9NVF7 368 aa22.21■■□□□ 1.15
CPNE7-209ENST00000568977 PATL2C9JE40 543 aaKnown RBP22.2■■□□□ 1.14
CPNE7-209ENST00000568977 FAM83BQ5T0W9 1011 aa22.2■■□□□ 1.14
CPNE7-209ENST00000568977 NACAP1Q9BZK3 213 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms