RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 RASA1P20936 1047 aa22.65■■□□□ 1.22
CPNE7-208ENST00000566398 CCNA1P78396 465 aa22.65■■□□□ 1.22
CPNE7-208ENST00000566398 POTEEQ6S8J3 1075 aa22.65■■□□□ 1.22
CPNE7-208ENST00000566398 TICAM2Q86XR7 235 aa22.65■■□□□ 1.22
CPNE7-208ENST00000566398 CWC22Q9HCG8 908 aaKnown RBP22.65■■□□□ 1.22
CPNE7-208ENST00000566398 TNRC18O15417 2968 aaPredicted RBP22.65■■□□□ 1.22
CPNE7-208ENST00000566398 BAZ2AQ9UIF9 1905 aaKnown RBP22.65■■□□□ 1.22
CPNE7-208ENST00000566398 MKI67P46013 3256 aaKnown RBP22.64■■□□□ 1.22
CPNE7-208ENST00000566398 CCL5P13501 91 aa22.64■■□□□ 1.21
CPNE7-208ENST00000566398 Q3C1V9 767 aa22.64■■□□□ 1.21
CPNE7-208ENST00000566398 CCDC129Q6ZRS4 1044 aa22.64■■□□□ 1.21
CPNE7-208ENST00000566398 SPICE1Q8N0Z3 855 aa22.64■■□□□ 1.21
CPNE7-208ENST00000566398 PORCNQ9H237 461 aa22.64■■□□□ 1.21
CPNE7-208ENST00000566398 HELLSQ9NRZ9 838 aa22.64■■□□□ 1.21
CPNE7-208ENST00000566398 GJD2Q9UKL4 321 aa22.64■■□□□ 1.21
CPNE7-208ENST00000566398 WDR46O15213 610 aaKnown RBP22.63■■□□□ 1.21
CPNE7-208ENST00000566398 CNMDO75829 334 aa22.63■■□□□ 1.21
CPNE7-208ENST00000566398 SLC3A2P08195 630 aaKnown RBP22.63■■□□□ 1.21
CPNE7-208ENST00000566398 IRX6P78412 446 aaPredicted RBP22.63■■□□□ 1.21
CPNE7-208ENST00000566398 COG2Q14746 738 aa22.63■■□□□ 1.21
CPNE7-208ENST00000566398 KIAA1755Q5JYT7 1200 aa22.63■■□□□ 1.21
CPNE7-208ENST00000566398 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.63■■□□□ 1.21
CPNE7-208ENST00000566398 RNF208Q9H0X6 261 aa22.63■■□□□ 1.21
CPNE7-208ENST00000566398 GOPCQ9HD26 462 aa22.63■■□□□ 1.21
CPNE7-208ENST00000566398 HOXC10Q9NYD6 342 aa22.63■■□□□ 1.21
CPNE7-208ENST00000566398 PRDM1O75626 825 aa22.62■■□□□ 1.21
CPNE7-208ENST00000566398 PDE4BQ07343 736 aa22.62■■□□□ 1.21
CPNE7-208ENST00000566398 PPARAQ07869 468 aa22.62■■□□□ 1.21
CPNE7-208ENST00000566398 GPR142Q7Z601 462 aa22.62■■□□□ 1.21
CPNE7-208ENST00000566398 PLEKHH3Q7Z736 793 aa22.62■■□□□ 1.21
CPNE7-208ENST00000566398 PLEKHM2Q8IWE5 1019 aa22.62■■□□□ 1.21
CPNE7-208ENST00000566398 ZNF444Q8N0Y2 327 aaPredicted RBP22.62■■□□□ 1.21
CPNE7-208ENST00000566398 NKX2-3Q8TAU0 364 aa22.62■■□□□ 1.21
CPNE7-208ENST00000566398 RILPL2Q969X0 211 aa22.62■■□□□ 1.21
CPNE7-208ENST00000566398 NUDT12Q9BQG2 462 aa22.62■■□□□ 1.21
CPNE7-208ENST00000566398 OSBPL3Q9H4L5 887 aa22.62■■□□□ 1.21
CPNE7-208ENST00000566398 FOXP2O15409 715 aa22.61■■□□□ 1.21
CPNE7-208ENST00000566398 FLOT1O75955 427 aa22.61■■□□□ 1.21
CPNE7-208ENST00000566398 GJB1P08034 283 aa22.61■■□□□ 1.21
CPNE7-208ENST00000566398 FAM227BQ96M60 508 aa22.61■■□□□ 1.21
CPNE7-208ENST00000566398 UNC93B1Q9H1C4 597 aa22.61■■□□□ 1.21
CPNE7-208ENST00000566398 BTBD7Q9P203 1132 aa22.61■■□□□ 1.21
CPNE7-208ENST00000566398 RBBP6Q7Z6E9 1792 aaKnown RBP22.61■■□□□ 1.21
CPNE7-208ENST00000566398 A0A0D9SFI3 127 aa22.6■■□□□ 1.21
CPNE7-208ENST00000566398 RAD21O60216 631 aa22.6■■□□□ 1.21
CPNE7-208ENST00000566398 HMGCRP04035 888 aa22.6■■□□□ 1.21
CPNE7-208ENST00000566398 CYP2B6P20813 491 aa22.6■■□□□ 1.21
CPNE7-208ENST00000566398 MCMDC2Q4G0Z9 681 aa22.6■■□□□ 1.21
CPNE7-208ENST00000566398 WDR78Q5VTH9 848 aa22.6■■□□□ 1.21
CPNE7-208ENST00000566398 MGAMO43451 1857 aa22.6■■□□□ 1.21
CPNE7-208ENST00000566398 GJA8P48165 433 aa22.59■■□□□ 1.21
CPNE7-208ENST00000566398 VPS53Q5VIR6 699 aa22.59■■□□□ 1.21
CPNE7-208ENST00000566398 MB21D1Q8N884 522 aa22.59■■□□□ 1.21
CPNE7-208ENST00000566398 NYAP2Q9P242 653 aa22.59■■□□□ 1.21
CPNE7-208ENST00000566398 KIAA0100Q14667 2235 aaKnown RBP22.59■■□□□ 1.21
CPNE7-208ENST00000566398 XRCC5P13010 732 aaKnown RBP22.58■■□□□ 1.21
CPNE7-208ENST00000566398 DSG3P32926 999 aa22.58■■□□□ 1.21
CPNE7-208ENST00000566398 RGS2P41220 211 aa22.58■■□□□ 1.21
CPNE7-208ENST00000566398 NMIQ13287 307 aaPredicted RBP22.58■■□□□ 1.21
CPNE7-208ENST00000566398 SAMD1Q6SPF0 538 aaPredicted RBP22.58■■□□□ 1.21
CPNE7-208ENST00000566398 SHISA4Q96DD7 197 aa22.58■■□□□ 1.21
CPNE7-208ENST00000566398 IGKV6D-41A0A0C4DH26 115 aa22.57■■□□□ 1.2
CPNE7-208ENST00000566398 TSPY3P0CV98 308 aa22.57■■□□□ 1.2
CPNE7-208ENST00000566398 TSPY8P0CW00 308 aa22.57■■□□□ 1.2
CPNE7-208ENST00000566398 MORN1Q5T089 497 aa22.57■■□□□ 1.2
CPNE7-208ENST00000566398 TRMT44Q8IYL2 757 aaKnown RBP22.57■■□□□ 1.2
CPNE7-208ENST00000566398 U2AF1L4Q8WU68 220 aaKnown RBP22.57■■□□□ 1.2
CPNE7-208ENST00000566398 TRIB2Q92519 343 aa22.57■■□□□ 1.2
CPNE7-208ENST00000566398 ATG4CQ96DT6 458 aa22.57■■□□□ 1.2
CPNE7-208ENST00000566398 APBA2Q99767 749 aa22.57■■□□□ 1.2
CPNE7-208ENST00000566398 SPATC1LQ9H0A9 340 aa22.57■■□□□ 1.2
CPNE7-208ENST00000566398 IVNS1ABPQ9Y6Y0 642 aa22.57■■□□□ 1.2
CPNE7-208ENST00000566398 PLIN4Q96Q06 1357 aa22.57■■□□□ 1.2
CPNE7-208ENST00000566398 ZKSCAN1P17029 563 aaPredicted RBP22.56■■□□□ 1.2
CPNE7-208ENST00000566398 FAM83BQ5T0W9 1011 aa22.56■■□□□ 1.2
CPNE7-208ENST00000566398 USP6NLQ92738 828 aa22.56■■□□□ 1.2
CPNE7-208ENST00000566398 CEP95Q96GE4 821 aa22.56■■□□□ 1.2
CPNE7-208ENST00000566398 MTMR4Q9NYA4 1195 aa22.56■■□□□ 1.2
CPNE7-208ENST00000566398 CLIP2Q9UDT6 1046 aa22.56■■□□□ 1.2
CPNE7-208ENST00000566398 CCDC171Q6TFL3 1326 aa22.56■■□□□ 1.2
CPNE7-208ENST00000566398 TTLL1O95922 423 aa22.55■■□□□ 1.2
CPNE7-208ENST00000566398 SDSP20132 328 aa22.55■■□□□ 1.2
CPNE7-208ENST00000566398 CTDSPL2Q05D32 466 aa22.55■■□□□ 1.2
CPNE7-208ENST00000566398 MAP2K5Q13163 448 aa22.55■■□□□ 1.2
CPNE7-208ENST00000566398 ALX1Q15699 326 aa22.55■■□□□ 1.2
CPNE7-208ENST00000566398 PRPF38BQ5VTL8 546 aaKnown RBP22.55■■□□□ 1.2
CPNE7-208ENST00000566398 ZNF589Q86UQ0 364 aaPredicted RBP22.55■■□□□ 1.2
CPNE7-208ENST00000566398 NEDD1Q8NHV4 660 aa22.55■■□□□ 1.2
CPNE7-208ENST00000566398 DEFB118Q96PH6 123 aa22.55■■□□□ 1.2
CPNE7-208ENST00000566398 MOV10L1Q9BXT6 1211 aaKnown RBP22.55■■□□□ 1.2
CPNE7-208ENST00000566398 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.55■■□□□ 1.2
CPNE7-208ENST00000566398 PAK6Q9NQU5 681 aaPredicted RBP22.55■■□□□ 1.2
CPNE7-208ENST00000566398 FBXO28Q9NVF7 368 aa22.55■■□□□ 1.2
CPNE7-208ENST00000566398 MYH8P13535 1937 aa22.55■■□□□ 1.2
CPNE7-208ENST00000566398 SLC15A5A6NIM6 579 aa22.54■■□□□ 1.2
CPNE7-208ENST00000566398 F5H6K3 240 aa22.54■■□□□ 1.2
CPNE7-208ENST00000566398 NDUFB10O96000 172 aa22.54■■□□□ 1.2
CPNE7-208ENST00000566398 PTPREP23469 700 aa22.54■■□□□ 1.2
CPNE7-208ENST00000566398 MFAP1P55081 439 aaKnown RBP22.54■■□□□ 1.2
CPNE7-208ENST00000566398 TFAP4Q01664 338 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms