RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 MKNK2Q9HBH9 465 aa14.74□□□□□ -0.05
SEMA4B-220ENST00000561321 GJD2Q9UKL4 321 aa14.74□□□□□ -0.05
SEMA4B-220ENST00000561321 RABGAP1Q9Y3P9 1069 aa14.74□□□□□ -0.05
SEMA4B-220ENST00000561321 SPDYE16A6NNV3 312 aaPredicted RBP14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 PATL2C9JE40 543 aaKnown RBP14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 GJB1P08034 283 aa14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 EEF2P13639 858 aaKnown RBP14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 ZMYM1Q5SVZ6 1142 aa14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 CCDC129Q6ZRS4 1044 aa14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 GPR142Q7Z601 462 aa14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 PLEKHH3Q7Z736 793 aa14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 SHISA4Q96DD7 197 aa14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 NUDT12Q9BQG2 462 aa14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 BTBD7Q9P203 1132 aa14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 STAP2Q9UGK3 403 aa14.73□□□□□ -0.05
SEMA4B-220ENST00000561321 PRDM1O75626 825 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 IGHDP01880 384 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 HMGCRP04035 888 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 RASA1P20936 1047 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 GJA8P48165 433 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 CCNA1P78396 465 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 PRPF38BQ5VTL8 546 aaKnown RBP14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 IFNL3Q8IZI9 196 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 NKX2-3Q8TAU0 364 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 SOCS4Q8WXH5 440 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 EVI5LQ96CN4 794 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 NACAP1Q9BZK3 213 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 VCPKMTQ9H867 229 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 KANSL2Q9H9L4 492 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 TMX2Q9Y320 296 aa14.72□□□□□ -0.05
SEMA4B-220ENST00000561321 FLOT1O75955 427 aa14.71□□□□□ -0.05
SEMA4B-220ENST00000561321 TRIM32Q13049 653 aa14.71□□□□□ -0.05
SEMA4B-220ENST00000561321 COG2Q14746 738 aa14.71□□□□□ -0.05
SEMA4B-220ENST00000561321 SMC5Q8IY18 1101 aa14.71□□□□□ -0.05
SEMA4B-220ENST00000561321 U2AF1L4Q8WU68 220 aaKnown RBP14.71□□□□□ -0.05
SEMA4B-220ENST00000561321 LPAR1Q92633 364 aa14.71□□□□□ -0.05
SEMA4B-220ENST00000561321 DEFB118Q96PH6 123 aa14.71□□□□□ -0.05
SEMA4B-220ENST00000561321 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.71□□□□□ -0.05
SEMA4B-220ENST00000561321 NAPBQ9H115 298 aa14.71□□□□□ -0.05
SEMA4B-220ENST00000561321 ROBO3Q96MS0 1386 aa14.71□□□□□ -0.06
SEMA4B-220ENST00000561321 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
SEMA4B-220ENST00000561321 IRX6P78412 446 aaPredicted RBP14.7□□□□□ -0.06
SEMA4B-220ENST00000561321 LBX2Q6XYB7 198 aa14.7□□□□□ -0.06
SEMA4B-220ENST00000561321 ZNF444Q8N0Y2 327 aaPredicted RBP14.7□□□□□ -0.06
SEMA4B-220ENST00000561321 TRIB2Q92519 343 aa14.7□□□□□ -0.06
SEMA4B-220ENST00000561321 GOPCQ9HD26 462 aa14.7□□□□□ -0.06
SEMA4B-220ENST00000561321 HOXC10Q9NYD6 342 aa14.7□□□□□ -0.06
SEMA4B-220ENST00000561321 RLFQ13129 1914 aa14.7□□□□□ -0.06
SEMA4B-220ENST00000561321 GREB1LQ9C091 1923 aaPredicted RBP14.7□□□□□ -0.06
SEMA4B-220ENST00000561321 WDR46O15213 610 aaKnown RBP14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 SGPL1O95470 568 aa14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 TFRCP02786 760 aaKnown RBP14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 ZKSCAN1P17029 563 aaPredicted RBP14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 RGS2P41220 211 aa14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 PLS1Q14651 629 aa14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 CCL14Q16627 93 aa14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 MORN1Q5T089 497 aa14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 CHD1LQ86WJ1 897 aa14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 RILPL2Q969X0 211 aa14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 ATG4CQ96DT6 458 aa14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 ZNF287Q9HBT7 754 aa14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 IVNS1ABPQ9Y6Y0 642 aa14.69□□□□□ -0.06
SEMA4B-220ENST00000561321 SLC3A2P08195 630 aaKnown RBP14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 PRKAR2AP13861 404 aaKnown RBP14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 DSG3P32926 999 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 NUCB1Q02818 461 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 PPARAQ07869 468 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 FAM83BQ5T0W9 1011 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 VPS53Q5VIR6 699 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 USP6NLQ92738 828 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 FAM227BQ96M60 508 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 APBA2Q99767 749 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 MOV10L1Q9BXT6 1211 aaKnown RBP14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 SPATC1LQ9H0A9 340 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 HMX1Q9NP08 348 aaPredicted RBP14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 PAK6Q9NQU5 681 aaPredicted RBP14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 FBXO28Q9NVF7 368 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 A0A0G2JMZ2 1700 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 MYH4Q9Y623 1939 aa14.68□□□□□ -0.06
SEMA4B-220ENST00000561321 RPTORQ8N122 1335 aa14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 PARP14Q460N5 1801 aa14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 A0A0D9SFI3 127 aa14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 SLC15A5A6NIM6 579 aa14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 FARP2O94887 1054 aaPredicted RBP14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 XRCC5P13010 732 aaKnown RBP14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 PTPREP23469 700 aa14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 PDE4BQ07343 736 aa14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 MAP2K5Q13163 448 aa14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 FAM47AQ5JRC9 791 aa14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 NUP88Q99567 741 aaPredicted RBP14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 HELLSQ9NRZ9 838 aa14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 CLIP2Q9UDT6 1046 aa14.67□□□□□ -0.06
SEMA4B-220ENST00000561321 COL11A1P12107 1806 aaPredicted RBP14.66□□□□□ -0.06
SEMA4B-220ENST00000561321 FOXP2O15409 715 aa14.66□□□□□ -0.06
SEMA4B-220ENST00000561321 TSPY3P0CV98 308 aa14.66□□□□□ -0.06
SEMA4B-220ENST00000561321 TSPY8P0CW00 308 aa14.66□□□□□ -0.06
SEMA4B-220ENST00000561321 ERCC3P19447 782 aa14.66□□□□□ -0.06
SEMA4B-220ENST00000561321 CTDSPL2Q05D32 466 aa14.66□□□□□ -0.06
SEMA4B-220ENST00000561321 NMIQ13287 307 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms